data_8P29 # _model_server_result.job_id LDoLkj1G-tFz0s-5zmLIaQ _model_server_result.datetime_utc '2024-11-22 22:37:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8p29 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 8P29 # _exptl.entry_id 8P29 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 228.371 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MYRISTIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 117.51 _cell.angle_gamma 90 _cell.entry_id 8P29 _cell.length_a 121.842 _cell.length_b 61.652 _cell.length_c 80.018 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8P29 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,F 1 1 B,D,E,G 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C14 H28 O2' _chem_comp.formula_weight 228.371 _chem_comp.id MYR _chem_comp.mon_nstd_flag . _chem_comp.name 'MYRISTIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 MYR doub 250 n n C1 O2 MYR sing 251 n n C1 C2 MYR sing 252 n n O2 HO2 MYR sing 253 n n C2 C3 MYR sing 254 n n C2 H21 MYR sing 255 n n C2 H22 MYR sing 256 n n C3 C4 MYR sing 257 n n C3 H31 MYR sing 258 n n C3 H32 MYR sing 259 n n C4 C5 MYR sing 260 n n C4 H41 MYR sing 261 n n C4 H42 MYR sing 262 n n C5 C6 MYR sing 263 n n C5 H51 MYR sing 264 n n C5 H52 MYR sing 265 n n C6 C7 MYR sing 266 n n C6 H61 MYR sing 267 n n C6 H62 MYR sing 268 n n C7 C8 MYR sing 269 n n C7 H71 MYR sing 270 n n C7 H72 MYR sing 271 n n C8 C9 MYR sing 272 n n C8 H81 MYR sing 273 n n C8 H82 MYR sing 274 n n C9 C10 MYR sing 275 n n C9 H91 MYR sing 276 n n C9 H92 MYR sing 277 n n C10 C11 MYR sing 278 n n C10 H101 MYR sing 279 n n C10 H102 MYR sing 280 n n C11 C12 MYR sing 281 n n C11 H111 MYR sing 282 n n C11 H112 MYR sing 283 n n C12 C13 MYR sing 284 n n C12 H121 MYR sing 285 n n C12 H122 MYR sing 286 n n C13 C14 MYR sing 287 n n C13 H131 MYR sing 288 n n C13 H132 MYR sing 289 n n C14 H141 MYR sing 290 n n C14 H142 MYR sing 291 n n C14 H143 MYR sing 292 n n # _atom_sites.entry_id 8P29 _atom_sites.fract_transf_matrix[1][1] 0.008207 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004274 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01622 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01409 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MYR B 1 501 501 MYR MYR . D 3 GOL A 1 501 501 GOL GOL . E 4 WJC A 1 502 1 WJC LIG . F 5 HOH B 1 601 22 HOH HOH . F 5 HOH B 2 602 49 HOH HOH . F 5 HOH B 3 603 17 HOH HOH . F 5 HOH B 4 604 3 HOH HOH . F 5 HOH B 5 605 7 HOH HOH . F 5 HOH B 6 606 27 HOH HOH . F 5 HOH B 7 607 30 HOH HOH . F 5 HOH B 8 608 4 HOH HOH . F 5 HOH B 9 609 53 HOH HOH . F 5 HOH B 10 610 19 HOH HOH . F 5 HOH B 11 611 5 HOH HOH . F 5 HOH B 12 612 1 HOH HOH . F 5 HOH B 13 613 20 HOH HOH . F 5 HOH B 14 614 18 HOH HOH . F 5 HOH B 15 615 8 HOH HOH . F 5 HOH B 16 616 10 HOH HOH . F 5 HOH B 17 617 28 HOH HOH . F 5 HOH B 18 618 50 HOH HOH . F 5 HOH B 19 619 31 HOH HOH . F 5 HOH B 20 620 32 HOH HOH . F 5 HOH B 21 621 6 HOH HOH . F 5 HOH B 22 622 35 HOH HOH . F 5 HOH B 23 623 24 HOH HOH . F 5 HOH B 24 624 59 HOH HOH . F 5 HOH B 25 625 26 HOH HOH . F 5 HOH B 26 626 36 HOH HOH . F 5 HOH B 27 627 29 HOH HOH . F 5 HOH B 28 628 15 HOH HOH . F 5 HOH B 29 629 23 HOH HOH . F 5 HOH B 30 630 25 HOH HOH . F 5 HOH B 31 631 11 HOH HOH . F 5 HOH B 32 632 12 HOH HOH . F 5 HOH B 33 633 14 HOH HOH . F 5 HOH B 34 634 55 HOH HOH . F 5 HOH B 35 635 13 HOH HOH . F 5 HOH B 36 636 48 HOH HOH . F 5 HOH B 37 637 54 HOH HOH . F 5 HOH B 38 638 47 HOH HOH . F 5 HOH B 39 639 16 HOH HOH . F 5 HOH B 40 640 21 HOH HOH . G 5 HOH A 1 601 42 HOH HOH . G 5 HOH A 2 602 37 HOH HOH . G 5 HOH A 3 603 38 HOH HOH . G 5 HOH A 4 604 33 HOH HOH . G 5 HOH A 5 605 45 HOH HOH . G 5 HOH A 6 606 34 HOH HOH . G 5 HOH A 7 607 40 HOH HOH . G 5 HOH A 8 608 9 HOH HOH . G 5 HOH A 9 609 44 HOH HOH . G 5 HOH A 10 610 51 HOH HOH . G 5 HOH A 11 611 43 HOH HOH . G 5 HOH A 12 612 2 HOH HOH . G 5 HOH A 13 613 60 HOH HOH . G 5 HOH A 14 614 52 HOH HOH . G 5 HOH A 15 615 61 HOH HOH . G 5 HOH A 16 616 41 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 MYR . . . C 2 -37.578 -4.173 17.533 1 60.37 ? C1 MYR 501 B 1 HETATM 2 O O1 MYR . . . C 2 -36.907 -3.533 16.684 1 62.39 ? O1 MYR 501 B 1 HETATM 3 O O2 MYR . . . C 2 -38.842 -4.176 17.492 1 58.61 ? O2 MYR 501 B 1 HETATM 4 C C2 MYR . . . C 2 -36.825 -4.966 18.569 1 57.73 ? C2 MYR 501 B 1 HETATM 5 C C3 MYR . . . C 2 -36.063 -5.996 17.752 1 54.49 ? C3 MYR 501 B 1 HETATM 6 C C4 MYR . . . C 2 -35.91 -7.305 18.498 1 50.89 ? C4 MYR 501 B 1 HETATM 7 C C5 MYR . . . C 2 -35.973 -8.484 17.539 1 48.83 ? C5 MYR 501 B 1 HETATM 8 C C6 MYR . . . C 2 -35.016 -9.558 18.029 1 51.1 ? C6 MYR 501 B 1 HETATM 9 C C7 MYR . . . C 2 -34.812 -10.667 17.009 1 50.24 ? C7 MYR 501 B 1 HETATM 10 C C8 MYR . . . C 2 -36.138 -11.248 16.55 1 50.4 ? C8 MYR 501 B 1 HETATM 11 C C9 MYR . . . C 2 -36.762 -10.48 15.397 1 51.8 ? C9 MYR 501 B 1 HETATM 12 C C10 MYR . . . C 2 -37.665 -11.39 14.571 1 53.79 ? C10 MYR 501 B 1 HETATM 13 C C11 MYR . . . C 2 -36.788 -12.385 13.826 1 52.86 ? C11 MYR 501 B 1 HETATM 14 C C12 MYR . . . C 2 -36.466 -11.9 12.425 1 56.46 ? C12 MYR 501 B 1 HETATM 15 C C13 MYR . . . C 2 -37.205 -12.817 11.457 1 57.86 ? C13 MYR 501 B 1 HETATM 16 C C14 MYR . . . C 2 -36.328 -13.205 10.275 1 52.18 ? C14 MYR 501 B 1 HETATM 17 H H21 MYR . . . C 2 -37.506 -5.445 19.273 1 69.34 ? H21 MYR 501 B 1 HETATM 18 H H22 MYR . . . C 2 -36.147 -4.331 19.137 1 69.34 ? H22 MYR 501 B 1 HETATM 19 H H31 MYR . . . C 2 -35.076 -5.603 17.508 1 65.46 ? H31 MYR 501 B 1 HETATM 20 H H32 MYR . . . C 2 -36.592 -6.176 16.816 1 65.46 ? H32 MYR 501 B 1 HETATM 21 H H41 MYR . . . C 2 -36.702 -7.396 19.241 1 61.14 ? H41 MYR 501 B 1 HETATM 22 H H42 MYR . . . C 2 -34.955 -7.314 19.025 1 61.14 ? H42 MYR 501 B 1 HETATM 23 H H51 MYR . . . C 2 -36.989 -8.878 17.496 1 58.67 ? H51 MYR 501 B 1 HETATM 24 H H52 MYR . . . C 2 -35.695 -8.165 16.534 1 58.67 ? H52 MYR 501 B 1 HETATM 25 H H61 MYR . . . C 2 -34.053 -9.101 18.256 1 61.39 ? H61 MYR 501 B 1 HETATM 26 H H62 MYR . . . C 2 -35.407 -9.99 18.951 1 61.39 ? H62 MYR 501 B 1 HETATM 27 H H71 MYR . . . C 2 -34.273 -10.271 16.148 1 60.36 ? H71 MYR 501 B 1 HETATM 28 H H72 MYR . . . C 2 -34.205 -11.457 17.451 1 60.36 ? H72 MYR 501 B 1 HETATM 29 H H81 MYR . . . C 2 -36.833 -11.25 17.389 1 60.55 ? H81 MYR 501 B 1 HETATM 30 H H82 MYR . . . C 2 -35.982 -12.282 16.241 1 60.55 ? H82 MYR 501 B 1 HETATM 31 H H91 MYR . . . C 2 -35.976 -10.072 14.762 1 62.23 ? H91 MYR 501 B 1 HETATM 32 H H92 MYR . . . C 2 -37.344 -9.645 15.788 1 62.23 ? H92 MYR 501 B 1 HETATM 33 H H101 MYR . . . C 2 -38.362 -11.918 15.221 1 64.61 ? H101 MYR 501 B 1 HETATM 34 H H102 MYR . . . C 2 -38.247 -10.8 13.864 1 64.61 ? H102 MYR 501 B 1 HETATM 35 H H111 MYR . . . C 2 -35.86 -12.533 14.379 1 63.51 ? H111 MYR 501 B 1 HETATM 36 H H112 MYR . . . C 2 -37.3 -13.345 13.768 1 63.51 ? H112 MYR 501 B 1 HETATM 37 H H121 MYR . . . C 2 -36.79 -10.867 12.294 1 67.83 ? H121 MYR 501 B 1 HETATM 38 H H122 MYR . . . C 2 -35.392 -11.939 12.244 1 67.83 ? H122 MYR 501 B 1 HETATM 39 H H131 MYR . . . C 2 -38.099 -12.312 11.093 1 69.5 ? H131 MYR 501 B 1 HETATM 40 H H132 MYR . . . C 2 -37.519 -13.718 11.984 1 69.5 ? H132 MYR 501 B 1 HETATM 41 H H141 MYR . . . C 2 -35.97 -12.304 9.778 1 62.69 ? H141 MYR 501 B 1 HETATM 42 H H142 MYR . . . C 2 -35.477 -13.787 10.629 1 62.69 ? H142 MYR 501 B 1 HETATM 43 H H143 MYR . . . C 2 -36.909 -13.801 9.572 1 62.69 ? H143 MYR 501 B 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 43 #