data_8P2O # _model_server_result.job_id 9k0VwEchJ1TFlYrj6VQxPg _model_server_result.datetime_utc '2024-10-10 08:21:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8p2o # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":202}' # _entry.id 8P2O # _exptl.entry_id 8P2O _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8P2O _cell.length_a 87.918 _cell.length_b 87.918 _cell.length_c 97.795 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8P2O _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall 'P 61' _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 8P2O _atom_sites.fract_transf_matrix[1][1] 0.011374 _atom_sites.fract_transf_matrix[1][2] 0.006567 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013134 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010225 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EDO A 1 201 203 EDO EDO . D 2 EDO A 1 202 204 EDO EDO . E 2 EDO A 1 203 205 EDO EDO . F 2 EDO A 1 204 206 EDO EDO . G 2 EDO A 1 205 207 EDO EDO . H 2 EDO A 1 206 208 EDO EDO . I 2 EDO B 1 201 201 EDO EDO . J 2 EDO B 1 202 202 EDO EDO . K 3 HOH A 1 301 163 HOH HOH . K 3 HOH A 2 302 171 HOH HOH . K 3 HOH A 3 303 129 HOH HOH . K 3 HOH A 4 304 55 HOH HOH . K 3 HOH A 5 305 94 HOH HOH . K 3 HOH A 6 306 67 HOH HOH . K 3 HOH A 7 307 111 HOH HOH . K 3 HOH A 8 308 107 HOH HOH . K 3 HOH A 9 309 157 HOH HOH . K 3 HOH A 10 310 48 HOH HOH . K 3 HOH A 11 311 41 HOH HOH . K 3 HOH A 12 312 65 HOH HOH . K 3 HOH A 13 313 42 HOH HOH . K 3 HOH A 14 314 66 HOH HOH . K 3 HOH A 15 315 150 HOH HOH . K 3 HOH A 16 316 121 HOH HOH . K 3 HOH A 17 317 20 HOH HOH . K 3 HOH A 18 318 91 HOH HOH . K 3 HOH A 19 319 68 HOH HOH . K 3 HOH A 20 320 69 HOH HOH . K 3 HOH A 21 321 79 HOH HOH . K 3 HOH A 22 322 145 HOH HOH . K 3 HOH A 23 323 174 HOH HOH . K 3 HOH A 24 324 34 HOH HOH . K 3 HOH A 25 325 135 HOH HOH . K 3 HOH A 26 326 22 HOH HOH . K 3 HOH A 27 327 93 HOH HOH . K 3 HOH A 28 328 7 HOH HOH . K 3 HOH A 29 329 39 HOH HOH . K 3 HOH A 30 330 52 HOH HOH . K 3 HOH A 31 331 60 HOH HOH . K 3 HOH A 32 332 146 HOH HOH . K 3 HOH A 33 333 3 HOH HOH . K 3 HOH A 34 334 14 HOH HOH . K 3 HOH A 35 335 172 HOH HOH . K 3 HOH A 36 336 50 HOH HOH . K 3 HOH A 37 337 9 HOH HOH . K 3 HOH A 38 338 12 HOH HOH . K 3 HOH A 39 339 31 HOH HOH . K 3 HOH A 40 340 56 HOH HOH . K 3 HOH A 41 341 158 HOH HOH . K 3 HOH A 42 342 33 HOH HOH . K 3 HOH A 43 343 17 HOH HOH . K 3 HOH A 44 344 165 HOH HOH . K 3 HOH A 45 345 90 HOH HOH . K 3 HOH A 46 346 81 HOH HOH . K 3 HOH A 47 347 21 HOH HOH . K 3 HOH A 48 348 130 HOH HOH . K 3 HOH A 49 349 27 HOH HOH . K 3 HOH A 50 350 85 HOH HOH . K 3 HOH A 51 351 74 HOH HOH . K 3 HOH A 52 352 98 HOH HOH . K 3 HOH A 53 353 51 HOH HOH . K 3 HOH A 54 354 173 HOH HOH . K 3 HOH A 55 355 23 HOH HOH . K 3 HOH A 56 356 2 HOH HOH . K 3 HOH A 57 357 57 HOH HOH . K 3 HOH A 58 358 53 HOH HOH . K 3 HOH A 59 359 10 HOH HOH . K 3 HOH A 60 360 100 HOH HOH . K 3 HOH A 61 361 112 HOH HOH . K 3 HOH A 62 362 71 HOH HOH . K 3 HOH A 63 363 152 HOH HOH . K 3 HOH A 64 364 8 HOH HOH . K 3 HOH A 65 365 137 HOH HOH . K 3 HOH A 66 366 86 HOH HOH . K 3 HOH A 67 367 88 HOH HOH . K 3 HOH A 68 368 38 HOH HOH . K 3 HOH A 69 369 170 HOH HOH . K 3 HOH A 70 370 132 HOH HOH . K 3 HOH A 71 371 183 HOH HOH . K 3 HOH A 72 372 181 HOH HOH . K 3 HOH A 73 373 127 HOH HOH . K 3 HOH A 74 374 115 HOH HOH . K 3 HOH A 75 375 185 HOH HOH . K 3 HOH A 76 376 104 HOH HOH . K 3 HOH A 77 377 166 HOH HOH . K 3 HOH A 78 378 106 HOH HOH . K 3 HOH A 79 379 134 HOH HOH . K 3 HOH A 80 380 168 HOH HOH . K 3 HOH A 81 381 176 HOH HOH . K 3 HOH A 82 382 109 HOH HOH . K 3 HOH A 83 383 120 HOH HOH . K 3 HOH A 84 384 162 HOH HOH . K 3 HOH A 85 385 80 HOH HOH . K 3 HOH A 86 386 139 HOH HOH . K 3 HOH A 87 387 182 HOH HOH . K 3 HOH A 88 388 37 HOH HOH . K 3 HOH A 89 389 102 HOH HOH . L 3 HOH B 1 301 103 HOH HOH . L 3 HOH B 2 302 144 HOH HOH . L 3 HOH B 3 303 131 HOH HOH . L 3 HOH B 4 304 151 HOH HOH . L 3 HOH B 5 305 59 HOH HOH . L 3 HOH B 6 306 184 HOH HOH . L 3 HOH B 7 307 72 HOH HOH . L 3 HOH B 8 308 73 HOH HOH . L 3 HOH B 9 309 54 HOH HOH . L 3 HOH B 10 310 147 HOH HOH . L 3 HOH B 11 311 24 HOH HOH . L 3 HOH B 12 312 26 HOH HOH . L 3 HOH B 13 313 61 HOH HOH . L 3 HOH B 14 314 18 HOH HOH . L 3 HOH B 15 315 47 HOH HOH . L 3 HOH B 16 316 114 HOH HOH . L 3 HOH B 17 317 117 HOH HOH . L 3 HOH B 18 318 116 HOH HOH . L 3 HOH B 19 319 40 HOH HOH . L 3 HOH B 20 320 96 HOH HOH . L 3 HOH B 21 321 1 HOH HOH . L 3 HOH B 22 322 113 HOH HOH . L 3 HOH B 23 323 15 HOH HOH . L 3 HOH B 24 324 16 HOH HOH . L 3 HOH B 25 325 124 HOH HOH . L 3 HOH B 26 326 45 HOH HOH . L 3 HOH B 27 327 29 HOH HOH . L 3 HOH B 28 328 126 HOH HOH . L 3 HOH B 29 329 19 HOH HOH . L 3 HOH B 30 330 49 HOH HOH . L 3 HOH B 31 331 64 HOH HOH . L 3 HOH B 32 332 167 HOH HOH . L 3 HOH B 33 333 119 HOH HOH . L 3 HOH B 34 334 76 HOH HOH . L 3 HOH B 35 335 143 HOH HOH . L 3 HOH B 36 336 36 HOH HOH . L 3 HOH B 37 337 63 HOH HOH . L 3 HOH B 38 338 6 HOH HOH . L 3 HOH B 39 339 105 HOH HOH . L 3 HOH B 40 340 46 HOH HOH . L 3 HOH B 41 341 95 HOH HOH . L 3 HOH B 42 342 154 HOH HOH . L 3 HOH B 43 343 164 HOH HOH . L 3 HOH B 44 344 32 HOH HOH . L 3 HOH B 45 345 4 HOH HOH . L 3 HOH B 46 346 44 HOH HOH . L 3 HOH B 47 347 161 HOH HOH . L 3 HOH B 48 348 179 HOH HOH . L 3 HOH B 49 349 28 HOH HOH . L 3 HOH B 50 350 5 HOH HOH . L 3 HOH B 51 351 62 HOH HOH . L 3 HOH B 52 352 169 HOH HOH . L 3 HOH B 53 353 97 HOH HOH . L 3 HOH B 54 354 101 HOH HOH . L 3 HOH B 55 355 108 HOH HOH . L 3 HOH B 56 356 25 HOH HOH . L 3 HOH B 57 357 186 HOH HOH . L 3 HOH B 58 358 122 HOH HOH . L 3 HOH B 59 359 43 HOH HOH . L 3 HOH B 60 360 84 HOH HOH . L 3 HOH B 61 361 138 HOH HOH . L 3 HOH B 62 362 92 HOH HOH . L 3 HOH B 63 363 89 HOH HOH . L 3 HOH B 64 364 30 HOH HOH . L 3 HOH B 65 365 13 HOH HOH . L 3 HOH B 66 366 35 HOH HOH . L 3 HOH B 67 367 148 HOH HOH . L 3 HOH B 68 368 78 HOH HOH . L 3 HOH B 69 369 156 HOH HOH . L 3 HOH B 70 370 133 HOH HOH . L 3 HOH B 71 371 142 HOH HOH . L 3 HOH B 72 372 153 HOH HOH . L 3 HOH B 73 373 159 HOH HOH . L 3 HOH B 74 374 83 HOH HOH . L 3 HOH B 75 375 180 HOH HOH . L 3 HOH B 76 376 77 HOH HOH . L 3 HOH B 77 377 177 HOH HOH . L 3 HOH B 78 378 118 HOH HOH . L 3 HOH B 79 379 160 HOH HOH . L 3 HOH B 80 380 140 HOH HOH . L 3 HOH B 81 381 125 HOH HOH . L 3 HOH B 82 382 123 HOH HOH . L 3 HOH B 83 383 178 HOH HOH . L 3 HOH B 84 384 99 HOH HOH . L 3 HOH B 85 385 155 HOH HOH . L 3 HOH B 86 386 87 HOH HOH . L 3 HOH B 87 387 11 HOH HOH . L 3 HOH B 88 388 110 HOH HOH . L 3 HOH B 89 389 58 HOH HOH . L 3 HOH B 90 390 128 HOH HOH . L 3 HOH B 91 391 75 HOH HOH . L 3 HOH B 92 392 70 HOH HOH . L 3 HOH B 93 393 136 HOH HOH . L 3 HOH B 94 394 149 HOH HOH . L 3 HOH B 95 395 141 HOH HOH . L 3 HOH B 96 396 82 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . D 2 -33.428 26.984 36.855 1 48.07 ? C1 EDO 202 A 1 HETATM 2 O O1 EDO . . . D 2 -32.247 26.193 36.694 1 59.37 ? O1 EDO 202 A 1 HETATM 3 C C2 EDO . . . D 2 -34.553 26.029 37.235 1 49.6 ? C2 EDO 202 A 1 HETATM 4 O O2 EDO . . . D 2 -35.78 26.747 37.32 1 48.61 ? O2 EDO 202 A 1 # _model_server_stats.io_time_ms 78 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 263 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #