data_8P3C
#
_model_server_result.job_id            2XMkUFnsNkqJFpM92yKCfg 
_model_server_result.datetime_utc      '2024-10-10 22:32:53' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8p3c 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":201}' 
#
_entry.id    8P3C 
#
_exptl.entry_id    8P3C 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              556.624 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (2~{S})-1-[(4-fluorophenyl)methylsulfonyl]-~{N}-[(2~{S})-3-(4-fluorophenyl)-1-oxidanylidene-1-(pyridin-3-ylmethylamino)propan-2-yl]piperidine-2-carboxamide 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            8P3C 
_cell.length_a            77.608 
_cell.length_b            77.608 
_cell.length_c            52.995 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8P3C 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C28 H30 F2 N4 O4 S' 
_chem_comp.formula_weight    556.624 
_chem_comp.id                WRX 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (2~{S})-1-[(4-fluorophenyl)methylsulfonyl]-~{N}-[(2~{S})-3-(4-fluorophenyl)-1-oxidanylidene-1-(pyridin-3-ylmethylamino)propan-2-yl]piperidine-2-carboxamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
F1 C1 WRX sing 392 n n 
C1 C28 WRX doub 393 n y 
C1 C2 WRX sing 394 n y 
C28 C27 WRX sing 395 n y 
C2 C3 WRX doub 396 n y 
C27 C4 WRX doub 397 n y 
C3 C4 WRX sing 398 n y 
C4 C5 WRX sing 399 n n 
O1 S1 WRX doub 400 n n 
O4 S1 WRX doub 401 n n 
S1 C5 WRX sing 402 n n 
S1 N1 WRX sing 403 n n 
F2 C13 WRX sing 404 n n 
N1 C26 WRX sing 405 n n 
N1 C6 WRX sing 406 n n 
C13 C12 WRX doub 407 n y 
C13 C14 WRX sing 408 n y 
C26 C25 WRX sing 409 n n 
C12 C11 WRX sing 410 n y 
C14 C15 WRX doub 411 n y 
C25 C24 WRX sing 412 n n 
C6 C23 WRX sing 413 n n 
C6 C7 WRX sing 414 n n 
C23 C24 WRX sing 415 n n 
C11 C10 WRX doub 416 n y 
C15 C10 WRX sing 417 n y 
C7 N2 WRX sing 418 n n 
C7 O3 WRX doub 419 n n 
N2 C8 WRX sing 420 n n 
C10 C9 WRX sing 421 n n 
O2 C16 WRX doub 422 n n 
C8 C9 WRX sing 423 n n 
C8 C16 WRX sing 424 n n 
C16 N3 WRX sing 425 n n 
C19 N4 WRX doub 426 n y 
C19 C18 WRX sing 427 n y 
N4 C20 WRX sing 428 n y 
N3 C17 WRX sing 429 n n 
C17 C18 WRX sing 430 n n 
C18 C22 WRX doub 431 n y 
C20 C21 WRX doub 432 n y 
C22 C21 WRX sing 433 n y 
N3 H1 WRX sing 434 n n 
C5 H2 WRX sing 435 n n 
C5 H3 WRX sing 436 n n 
C6 H4 WRX sing 437 n n 
C8 H5 WRX sing 438 n n 
C15 H6 WRX sing 439 n n 
C17 H7 WRX sing 440 n n 
C17 H8 WRX sing 441 n n 
C20 H9 WRX sing 442 n n 
C21 H10 WRX sing 443 n n 
C22 H11 WRX sing 444 n n 
C24 H12 WRX sing 445 n n 
C24 H13 WRX sing 446 n n 
C26 H14 WRX sing 447 n n 
C26 H15 WRX sing 448 n n 
C28 H16 WRX sing 449 n n 
C2 H17 WRX sing 450 n n 
C3 H18 WRX sing 451 n n 
N2 H19 WRX sing 452 n n 
C9 H20 WRX sing 453 n n 
C9 H21 WRX sing 454 n n 
C11 H22 WRX sing 455 n n 
C12 H23 WRX sing 456 n n 
C14 H24 WRX sing 457 n n 
C19 H25 WRX sing 458 n n 
C23 H26 WRX sing 459 n n 
C23 H27 WRX sing 460 n n 
C25 H28 WRX sing 461 n n 
C25 H29 WRX sing 462 n n 
C27 H30 WRX sing 463 n n 
#
_atom_sites.entry_id                     8P3C 
_atom_sites.fract_transf_matrix[1][1]    0.012885 
_atom_sites.fract_transf_matrix[1][2]    0.007439 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014879 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01887 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 WRX B 1 201 202 WRX LIG . 
C 3 GOL B 1 202 203 GOL GOL . 
D 3 GOL B 1 203 204 GOL GOL . 
E 4 PEG B 1 204 205 PEG PEG . 
F 5 HOH B 1 301 82 HOH HOH . 
F 5 HOH B 2 302 35 HOH HOH . 
F 5 HOH B 3 303 29 HOH HOH . 
F 5 HOH B 4 304 34 HOH HOH . 
F 5 HOH B 5 305 105 HOH HOH . 
F 5 HOH B 6 306 2 HOH HOH . 
F 5 HOH B 7 307 104 HOH HOH . 
F 5 HOH B 8 308 93 HOH HOH . 
F 5 HOH B 9 309 86 HOH HOH . 
F 5 HOH B 10 310 59 HOH HOH . 
F 5 HOH B 11 311 56 HOH HOH . 
F 5 HOH B 12 312 36 HOH HOH . 
F 5 HOH B 13 313 13 HOH HOH . 
F 5 HOH B 14 314 108 HOH HOH . 
F 5 HOH B 15 315 110 HOH HOH . 
F 5 HOH B 16 316 57 HOH HOH . 
F 5 HOH B 17 317 33 HOH HOH . 
F 5 HOH B 18 318 31 HOH HOH . 
F 5 HOH B 19 319 45 HOH HOH . 
F 5 HOH B 20 320 18 HOH HOH . 
F 5 HOH B 21 321 17 HOH HOH . 
F 5 HOH B 22 322 21 HOH HOH . 
F 5 HOH B 23 323 14 HOH HOH . 
F 5 HOH B 24 324 84 HOH HOH . 
F 5 HOH B 25 325 68 HOH HOH . 
F 5 HOH B 26 326 79 HOH HOH . 
F 5 HOH B 27 327 22 HOH HOH . 
F 5 HOH B 28 328 65 HOH HOH . 
F 5 HOH B 29 329 27 HOH HOH . 
F 5 HOH B 30 330 8 HOH HOH . 
F 5 HOH B 31 331 74 HOH HOH . 
F 5 HOH B 32 332 5 HOH HOH . 
F 5 HOH B 33 333 66 HOH HOH . 
F 5 HOH B 34 334 12 HOH HOH . 
F 5 HOH B 35 335 3 HOH HOH . 
F 5 HOH B 36 336 62 HOH HOH . 
F 5 HOH B 37 337 10 HOH HOH . 
F 5 HOH B 38 338 9 HOH HOH . 
F 5 HOH B 39 339 23 HOH HOH . 
F 5 HOH B 40 340 25 HOH HOH . 
F 5 HOH B 41 341 95 HOH HOH . 
F 5 HOH B 42 342 50 HOH HOH . 
F 5 HOH B 43 343 53 HOH HOH . 
F 5 HOH B 44 344 43 HOH HOH . 
F 5 HOH B 45 345 101 HOH HOH . 
F 5 HOH B 46 346 109 HOH HOH . 
F 5 HOH B 47 347 11 HOH HOH . 
F 5 HOH B 48 348 55 HOH HOH . 
F 5 HOH B 49 349 52 HOH HOH . 
F 5 HOH B 50 350 89 HOH HOH . 
F 5 HOH B 51 351 16 HOH HOH . 
F 5 HOH B 52 352 88 HOH HOH . 
F 5 HOH B 53 353 80 HOH HOH . 
F 5 HOH B 54 354 106 HOH HOH . 
F 5 HOH B 55 355 58 HOH HOH . 
F 5 HOH B 56 356 54 HOH HOH . 
F 5 HOH B 57 357 49 HOH HOH . 
F 5 HOH B 58 358 85 HOH HOH . 
F 5 HOH B 59 359 40 HOH HOH . 
F 5 HOH B 60 360 51 HOH HOH . 
F 5 HOH B 61 361 69 HOH HOH . 
F 5 HOH B 62 362 32 HOH HOH . 
F 5 HOH B 63 363 30 HOH HOH . 
F 5 HOH B 64 364 47 HOH HOH . 
F 5 HOH B 65 365 6 HOH HOH . 
F 5 HOH B 66 366 48 HOH HOH . 
F 5 HOH B 67 367 103 HOH HOH . 
F 5 HOH B 68 368 111 HOH HOH . 
F 5 HOH B 69 369 15 HOH HOH . 
F 5 HOH B 70 370 71 HOH HOH . 
F 5 HOH B 71 371 102 HOH HOH . 
F 5 HOH B 72 372 72 HOH HOH . 
F 5 HOH B 73 373 70 HOH HOH . 
F 5 HOH B 74 374 87 HOH HOH . 
F 5 HOH B 75 375 91 HOH HOH . 
F 5 HOH B 76 376 67 HOH HOH . 
F 5 HOH B 77 377 28 HOH HOH . 
F 5 HOH B 78 378 38 HOH HOH . 
F 5 HOH B 79 379 92 HOH HOH . 
F 5 HOH B 80 380 99 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 WRX . . . B 2 -19.043 28.973 -0.628 1 27.09 ? N1 WRX 201 B 1 
HETATM 2 N N3 WRX . . . B 2 -18.946 32.739 4.557 1 27.39 ? N3 WRX 201 B 1 
HETATM 3 C C4 WRX . . . B 2 -17.274 31.488 -3.249 1 25.51 ? C4 WRX 201 B 1 
HETATM 4 C C5 WRX . . . B 2 -17.673 30.919 -1.921 1 27.01 ? C5 WRX 201 B 1 
HETATM 5 C C6 WRX . . . B 2 -20.154 29.316 0.275 1 34.98 ? C6 WRX 201 B 1 
HETATM 6 C C7 WRX . . . B 2 -19.831 30.109 1.559 1 35.01 ? C7 WRX 201 B 1 
HETATM 7 C C8 WRX . . . B 2 -18.106 31.054 3.009 1 26.18 ? C8 WRX 201 B 1 
HETATM 8 C C10 WRX . . . B 2 -15.826 31.249 1.834 1 28.53 ? C10 WRX 201 B 1 
HETATM 9 C C13 WRX . . . B 2 -14.441 31.679 -0.506 1 35.08 ? C13 WRX 201 B 1 
HETATM 10 C C15 WRX . . . B 2 -15.707 32.523 1.295 1 32.34 ? C15 WRX 201 B 1 
HETATM 11 C C17 WRX . . . B 2 -19.288 34.085 4.989 1 28.27 ? C17 WRX 201 B 1 
HETATM 12 C C20 WRX . . . B 2 -23.442 34.792 5.319 1 26.6 ? C20 WRX 201 B 1 
HETATM 13 C C21 WRX . . . B 2 -22.797 34.251 6.394 1 26.35 ? C21 WRX 201 B 1 
HETATM 14 C C22 WRX . . . B 2 -21.446 34.008 6.3 1 28.65 ? C22 WRX 201 B 1 
HETATM 15 C C24 WRX . . . B 2 -20.008 26.988 1.175 1 28.31 ? C24 WRX 201 B 1 
HETATM 16 C C26 WRX . . . B 2 -18.115 27.943 -0.149 1 27.06 ? C26 WRX 201 B 1 
HETATM 17 C C28 WRX . . . B 2 -15.829 31.483 -5.178 1 29.59 ? C28 WRX 201 B 1 
HETATM 18 F F1 WRX . . . B 2 -16.166 33.061 -6.874 1 34.86 ? F1 WRX 201 B 1 
HETATM 19 C C1 WRX . . . B 2 -16.533 32.54 -5.674 1 30.18 ? C1 WRX 201 B 1 
HETATM 20 C C2 WRX . . . B 2 -17.585 33.1 -5.016 1 27.77 ? C2 WRX 201 B 1 
HETATM 21 C C3 WRX . . . B 2 -17.955 32.56 -3.794 1 26.84 ? C3 WRX 201 B 1 
HETATM 22 S S1 WRX . . . B 2 -18.912 29.64 -2.078 1 26.03 ? S1 WRX 201 B 1 
HETATM 23 O O1 WRX . . . B 2 -18.382 28.658 -2.977 1 27.99 ? O1 WRX 201 B 1 
HETATM 24 N N2 WRX . . . B 2 -18.577 30.552 1.729 1 29.18 ? N2 WRX 201 B 1 
HETATM 25 C C9 WRX . . . B 2 -16.576 31.017 3.122 1 27.76 ? C9 WRX 201 B 1 
HETATM 26 C C11 WRX . . . B 2 -15.216 30.199 1.161 1 26.96 ? C11 WRX 201 B 1 
HETATM 27 C C12 WRX . . . B 2 -14.521 30.407 -0.02 1 33.16 ? C12 WRX 201 B 1 
HETATM 28 F F2 WRX . . . B 2 -13.762 31.892 -1.663 1 36.16 ? F2 WRX 201 B 1 
HETATM 29 C C14 WRX . . . B 2 -15.014 32.746 0.116 1 34.63 ? C14 WRX 201 B 1 
HETATM 30 C C16 WRX . . . B 2 -18.633 32.457 3.294 1 29.23 ? C16 WRX 201 B 1 
HETATM 31 C C18 WRX . . . B 2 -20.771 34.319 5.141 1 26.8 ? C18 WRX 201 B 1 
HETATM 32 C C19 WRX . . . B 2 -21.506 34.863 4.118 1 29.21 ? C19 WRX 201 B 1 
HETATM 33 N N4 WRX . . . B 2 -22.822 35.103 4.182 1 30.39 ? N4 WRX 201 B 1 
HETATM 34 O O2 WRX . . . B 2 -18.768 33.268 2.382 1 25.42 ? O2 WRX 201 B 1 
HETATM 35 O O3 WRX . . . B 2 -20.708 30.329 2.395 1 25.04 ? O3 WRX 201 B 1 
HETATM 36 C C23 WRX . . . B 2 -20.933 28.051 0.601 1 26.67 ? C23 WRX 201 B 1 
HETATM 37 C C25 WRX . . . B 2 -18.881 26.682 0.207 1 25.54 ? C25 WRX 201 B 1 
HETATM 38 O O4 WRX . . . B 2 -20.138 30.309 -2.392 1 25.77 ? O4 WRX 201 B 1 
HETATM 39 C C27 WRX . . . B 2 -16.21 30.958 -3.953 1 29.36 ? C27 WRX 201 B 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           273 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           39 
#