data_8P3I # _model_server_result.job_id YDw2OOKMQ58HzUbLlhGK7w _model_server_result.datetime_utc '2024-11-22 00:39:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8p3i # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"T","auth_seq_id":209}' # _entry.id 8P3I # _exptl.entry_id 8P3I _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8P3I _cell.length_a 61.367 _cell.length_b 76.601 _cell.length_c 118.674 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8P3I _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 K N N ? 5 T N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 161 A CYS 110 1_555 J C05 WTK . A WTK 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.904 ? covale ? covale2 B SG CYS 161 B CYS 109 1_555 S C05 WTK . B WTK 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.905 ? metalc ? metalc1 A OG1 THR 61 A THR 10 1_555 K MG MG . A MG 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.108 ? metalc ? metalc2 A OG1 THR 79 A THR 28 1_555 K MG MG . A MG 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.165 ? metalc ? metalc3 C O3G GNP . A GNP 201 1_555 K MG MG . A MG 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.088 ? metalc ? metalc4 C O1B GNP . A GNP 201 1_555 K MG MG . A MG 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.976 ? metalc ? metalc5 K MG MG . A MG 209 1_555 U O HOH . A HOH 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.376 ? metalc ? metalc6 K MG MG . A MG 209 1_555 U O HOH . A HOH 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.174 ? metalc ? metalc7 B OG1 THR 61 B THR 9 1_555 T MG MG . B MG 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.092 ? metalc ? metalc8 B OG1 THR 79 B THR 27 1_555 T MG MG . B MG 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.133 ? metalc ? metalc9 L O3G GNP . B GNP 201 1_555 T MG MG . B MG 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.871 ? metalc ? metalc10 L O1B GNP . B GNP 201 1_555 T MG MG . B MG 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.926 ? metalc ? metalc11 T MG MG . B MG 209 1_555 V O HOH . B HOH 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? metalc ? metalc12 T MG MG . B MG 209 1_555 V O HOH . B HOH 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.13 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8P3I _atom_sites.fract_transf_matrix[1][1] 0.016295 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013055 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008426 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GNP A 1 201 201 GNP GNP . D 3 GOL A 1 202 301 GOL GOL . E 3 GOL A 1 203 401 GOL GOL . F 3 GOL A 1 204 501 GOL GOL . G 3 GOL A 1 205 601 GOL GOL . H 3 GOL A 1 206 701 GOL GOL . I 3 GOL A 1 207 801 GOL GOL . J 4 WTK A 1 208 123 WTK C13 . K 5 MG A 1 209 3 MG MG . L 2 GNP B 1 201 201 GNP GNP . M 3 GOL B 1 202 301 GOL GOL . N 3 GOL B 1 203 401 GOL GOL . O 3 GOL B 1 204 501 GOL GOL . P 3 GOL B 1 205 601 GOL GOL . Q 3 GOL B 1 206 701 GOL GOL . R 3 GOL B 1 207 801 GOL GOL . S 4 WTK B 1 208 123 WTK C13 . T 5 MG B 1 209 4 MG MG . U 6 HOH A 1 301 59 HOH HOH . U 6 HOH A 2 302 2 HOH HOH . U 6 HOH A 3 303 12 HOH HOH . U 6 HOH A 4 304 1 HOH HOH . U 6 HOH A 5 305 30 HOH HOH . U 6 HOH A 6 306 32 HOH HOH . U 6 HOH A 7 307 33 HOH HOH . U 6 HOH A 8 308 11 HOH HOH . U 6 HOH A 9 309 7 HOH HOH . U 6 HOH A 10 310 5 HOH HOH . U 6 HOH A 11 311 14 HOH HOH . U 6 HOH A 12 312 13 HOH HOH . U 6 HOH A 13 313 55 HOH HOH . U 6 HOH A 14 314 56 HOH HOH . U 6 HOH A 15 315 48 HOH HOH . U 6 HOH A 16 316 31 HOH HOH . U 6 HOH A 17 317 60 HOH HOH . U 6 HOH A 18 318 17 HOH HOH . U 6 HOH A 19 319 6 HOH HOH . U 6 HOH A 20 320 58 HOH HOH . U 6 HOH A 21 321 16 HOH HOH . U 6 HOH A 22 322 38 HOH HOH . U 6 HOH A 23 323 49 HOH HOH . U 6 HOH A 24 324 15 HOH HOH . U 6 HOH A 25 325 8 HOH HOH . U 6 HOH A 26 326 9 HOH HOH . U 6 HOH A 27 327 10 HOH HOH . U 6 HOH A 28 328 22 HOH HOH . V 6 HOH B 1 301 47 HOH HOH . V 6 HOH B 2 302 50 HOH HOH . V 6 HOH B 3 303 46 HOH HOH . V 6 HOH B 4 304 3 HOH HOH . V 6 HOH B 5 305 54 HOH HOH . V 6 HOH B 6 306 35 HOH HOH . V 6 HOH B 7 307 4 HOH HOH . V 6 HOH B 8 308 23 HOH HOH . V 6 HOH B 9 309 41 HOH HOH . V 6 HOH B 10 310 36 HOH HOH . V 6 HOH B 11 311 43 HOH HOH . V 6 HOH B 12 312 42 HOH HOH . V 6 HOH B 13 313 52 HOH HOH . V 6 HOH B 14 314 53 HOH HOH . V 6 HOH B 15 315 27 HOH HOH . V 6 HOH B 16 316 19 HOH HOH . V 6 HOH B 17 317 21 HOH HOH . V 6 HOH B 18 318 45 HOH HOH . V 6 HOH B 19 319 44 HOH HOH . V 6 HOH B 20 320 20 HOH HOH . V 6 HOH B 21 321 40 HOH HOH . V 6 HOH B 22 322 57 HOH HOH . V 6 HOH B 23 323 34 HOH HOH . V 6 HOH B 24 324 18 HOH HOH . V 6 HOH B 25 325 29 HOH HOH . V 6 HOH B 26 326 37 HOH HOH . V 6 HOH B 27 327 28 HOH HOH . V 6 HOH B 28 328 39 HOH HOH . V 6 HOH B 29 329 51 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id T _atom_site.label_entity_id 5 _atom_site.Cartn_x 20.08 _atom_site.Cartn_y 5.066 _atom_site.Cartn_z 26.215 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 45.93 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 209 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 328 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #