data_8P3J # _model_server_result.job_id HAUPr9xDAue6_Zg48KQg1A _model_server_result.datetime_utc '2024-11-22 08:49:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8p3j # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":205}' # _entry.id 8P3J # _exptl.entry_id 8P3J _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8P3J _cell.length_a 62.436 _cell.length_b 75.828 _cell.length_c 118.53 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8P3J _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 G N N ? 5 M N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG1 THR 61 A THR 23 1_555 G MG MG . A MG 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? metalc ? metalc2 A OG1 THR 79 A THR 41 1_555 G MG MG . A MG 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.24 ? metalc ? metalc3 E O1G GNP . A GNP 203 1_555 G MG MG . A MG 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.909 ? metalc ? metalc4 E O2B GNP . A GNP 203 1_555 G MG MG . A MG 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.001 ? metalc ? metalc5 G MG MG . A MG 205 1_555 N O HOH . A HOH 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.372 ? metalc ? metalc6 G MG MG . A MG 205 1_555 N O HOH . A HOH 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.151 ? metalc ? metalc7 B OG1 THR 61 B THR 23 1_555 M MG MG . B MG 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? metalc ? metalc8 B OG1 THR 79 B THR 41 1_555 M MG MG . B MG 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? metalc ? metalc9 I O1G GNP . B GNP 202 1_555 M MG MG . B MG 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? metalc ? metalc10 I O1B GNP . B GNP 202 1_555 M MG MG . B MG 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.97 ? metalc ? metalc11 M MG MG . B MG 206 1_555 O O HOH . B HOH 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.117 ? metalc ? metalc12 M MG MG . B MG 206 1_555 O O HOH . B HOH 312 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.93 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8P3J _atom_sites.fract_transf_matrix[1][1] 0.016016 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013188 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008437 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 WT6 A 1 201 201 WT6 C01 . D 2 WT6 A 1 202 301 WT6 C01 . E 3 GNP A 1 203 401 GNP GNP . F 4 GOL A 1 204 501 GOL GOL . G 5 MG A 1 205 4 MG MG . H 2 WT6 B 1 201 201 WT6 C01 . I 3 GNP B 1 202 301 GNP GNP . J 2 WT6 B 1 203 401 WT6 C01 . K 4 GOL B 1 204 501 GOL GOL . L 4 GOL B 1 205 601 GOL GOL . M 5 MG B 1 206 3 MG MG . N 6 HOH A 1 301 16 HOH HOH . N 6 HOH A 2 302 79 HOH HOH . N 6 HOH A 3 303 9 HOH HOH . N 6 HOH A 4 304 29 HOH HOH . N 6 HOH A 5 305 64 HOH HOH . N 6 HOH A 6 306 55 HOH HOH . N 6 HOH A 7 307 8 HOH HOH . N 6 HOH A 8 308 59 HOH HOH . N 6 HOH A 9 309 67 HOH HOH . N 6 HOH A 10 310 75 HOH HOH . N 6 HOH A 11 311 21 HOH HOH . N 6 HOH A 12 312 96 HOH HOH . N 6 HOH A 13 313 56 HOH HOH . N 6 HOH A 14 314 31 HOH HOH . N 6 HOH A 15 315 88 HOH HOH . N 6 HOH A 16 316 30 HOH HOH . N 6 HOH A 17 317 77 HOH HOH . N 6 HOH A 18 318 17 HOH HOH . N 6 HOH A 19 319 86 HOH HOH . N 6 HOH A 20 320 62 HOH HOH . N 6 HOH A 21 321 50 HOH HOH . N 6 HOH A 22 322 4 HOH HOH . N 6 HOH A 23 323 53 HOH HOH . N 6 HOH A 24 324 23 HOH HOH . N 6 HOH A 25 325 92 HOH HOH . N 6 HOH A 26 326 12 HOH HOH . N 6 HOH A 27 327 93 HOH HOH . N 6 HOH A 28 328 60 HOH HOH . N 6 HOH A 29 329 66 HOH HOH . N 6 HOH A 30 330 15 HOH HOH . N 6 HOH A 31 331 58 HOH HOH . N 6 HOH A 32 332 83 HOH HOH . N 6 HOH A 33 333 70 HOH HOH . N 6 HOH A 34 334 80 HOH HOH . N 6 HOH A 35 335 34 HOH HOH . N 6 HOH A 36 336 65 HOH HOH . N 6 HOH A 37 337 63 HOH HOH . N 6 HOH A 38 338 72 HOH HOH . N 6 HOH A 39 339 76 HOH HOH . N 6 HOH A 40 340 87 HOH HOH . N 6 HOH A 41 341 89 HOH HOH . N 6 HOH A 42 342 52 HOH HOH . N 6 HOH A 43 343 101 HOH HOH . N 6 HOH A 44 344 27 HOH HOH . N 6 HOH A 45 345 103 HOH HOH . N 6 HOH A 46 346 97 HOH HOH . N 6 HOH A 47 347 73 HOH HOH . N 6 HOH A 48 348 102 HOH HOH . N 6 HOH A 49 349 74 HOH HOH . N 6 HOH A 50 350 26 HOH HOH . N 6 HOH A 51 351 71 HOH HOH . N 6 HOH A 52 352 54 HOH HOH . N 6 HOH A 53 353 90 HOH HOH . N 6 HOH A 54 354 94 HOH HOH . N 6 HOH A 55 355 98 HOH HOH . N 6 HOH A 56 356 57 HOH HOH . N 6 HOH A 57 357 48 HOH HOH . N 6 HOH A 58 358 61 HOH HOH . N 6 HOH A 59 359 81 HOH HOH . N 6 HOH A 60 360 49 HOH HOH . N 6 HOH A 61 361 78 HOH HOH . N 6 HOH A 62 362 82 HOH HOH . N 6 HOH A 63 363 51 HOH HOH . N 6 HOH A 64 364 47 HOH HOH . N 6 HOH A 65 365 69 HOH HOH . N 6 HOH A 66 366 68 HOH HOH . N 6 HOH A 67 367 84 HOH HOH . N 6 HOH A 68 368 85 HOH HOH . O 6 HOH B 1 301 22 HOH HOH . O 6 HOH B 2 302 25 HOH HOH . O 6 HOH B 3 303 6 HOH HOH . O 6 HOH B 4 304 20 HOH HOH . O 6 HOH B 5 305 38 HOH HOH . O 6 HOH B 6 306 13 HOH HOH . O 6 HOH B 7 307 18 HOH HOH . O 6 HOH B 8 308 41 HOH HOH . O 6 HOH B 9 309 42 HOH HOH . O 6 HOH B 10 310 10 HOH HOH . O 6 HOH B 11 311 5 HOH HOH . O 6 HOH B 12 312 7 HOH HOH . O 6 HOH B 13 313 1 HOH HOH . O 6 HOH B 14 314 99 HOH HOH . O 6 HOH B 15 315 35 HOH HOH . O 6 HOH B 16 316 45 HOH HOH . O 6 HOH B 17 317 2 HOH HOH . O 6 HOH B 18 318 100 HOH HOH . O 6 HOH B 19 319 46 HOH HOH . O 6 HOH B 20 320 36 HOH HOH . O 6 HOH B 21 321 91 HOH HOH . O 6 HOH B 22 322 43 HOH HOH . O 6 HOH B 23 323 24 HOH HOH . O 6 HOH B 24 324 33 HOH HOH . O 6 HOH B 25 325 32 HOH HOH . O 6 HOH B 26 326 37 HOH HOH . O 6 HOH B 27 327 44 HOH HOH . O 6 HOH B 28 328 39 HOH HOH . O 6 HOH B 29 329 95 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 5 _atom_site.Cartn_x 13.641 _atom_site.Cartn_y -6.687 _atom_site.Cartn_z -3.324 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 21.11 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 205 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #