data_8P3N
#
_model_server_result.job_id            2g1-dOF54MXDOK615W5o6w 
_model_server_result.datetime_utc      '2025-04-09 11:21:50' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8p3n 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":201}' 
#
_entry.id    8P3N 
#
_exptl.entry_id    8P3N 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              149.153 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            9-METHYL-9H-PURIN-6-AMINE 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          97.318 
_cell.angle_gamma         90 
_cell.entry_id            8P3N 
_cell.length_a            40.978 
_cell.length_b            59.021 
_cell.length_c            66.526 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8P3N 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C6 H7 N5' 
_chem_comp.formula_weight    149.153 
_chem_comp.id                ADZ 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              9-METHYL-9H-PURIN-6-AMINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N9 C8 ADZ sing 1 n y 
N9 C4 ADZ sing 2 n y 
N9 C1' ADZ sing 3 n n 
C8 N7 ADZ doub 4 n y 
C8 H8 ADZ sing 5 n n 
N7 C5 ADZ sing 6 n y 
C5 C6 ADZ doub 7 n y 
C5 C4 ADZ sing 8 n y 
C6 N6 ADZ sing 9 n n 
C6 N1 ADZ sing 10 n y 
N6 H6N1 ADZ sing 11 n n 
N6 H6N2 ADZ sing 12 n n 
N1 C2 ADZ doub 13 n y 
C2 N3 ADZ sing 14 n y 
C2 H2 ADZ sing 15 n n 
N3 C4 ADZ doub 16 n y 
C1' "H1'1" ADZ sing 17 n n 
C1' "H1'2" ADZ sing 18 n n 
C1' "H1'3" ADZ sing 19 n n 
#
_atom_sites.entry_id                     8P3N 
_atom_sites.fract_transf_matrix[1][1]    0.024403 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003134 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016943 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015155 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ADZ B 1 201 203 ADZ DRG . 
D 2 ADZ A 1 201 203 ADZ DRG . 
E 3 HOH B 1 301 68 HOH HOH . 
E 3 HOH B 2 302 40 HOH HOH . 
E 3 HOH B 3 303 48 HOH HOH . 
E 3 HOH B 4 304 4 HOH HOH . 
E 3 HOH B 5 305 85 HOH HOH . 
E 3 HOH B 6 306 56 HOH HOH . 
E 3 HOH B 7 307 87 HOH HOH . 
E 3 HOH B 8 308 7 HOH HOH . 
E 3 HOH B 9 309 16 HOH HOH . 
E 3 HOH B 10 310 25 HOH HOH . 
E 3 HOH B 11 311 47 HOH HOH . 
E 3 HOH B 12 312 23 HOH HOH . 
E 3 HOH B 13 313 94 HOH HOH . 
E 3 HOH B 14 314 37 HOH HOH . 
E 3 HOH B 15 315 15 HOH HOH . 
E 3 HOH B 16 316 98 HOH HOH . 
E 3 HOH B 17 317 42 HOH HOH . 
E 3 HOH B 18 318 27 HOH HOH . 
E 3 HOH B 19 319 18 HOH HOH . 
E 3 HOH B 20 320 21 HOH HOH . 
E 3 HOH B 21 321 6 HOH HOH . 
E 3 HOH B 22 322 39 HOH HOH . 
E 3 HOH B 23 323 26 HOH HOH . 
E 3 HOH B 24 324 100 HOH HOH . 
E 3 HOH B 25 325 44 HOH HOH . 
E 3 HOH B 26 326 93 HOH HOH . 
E 3 HOH B 27 327 33 HOH HOH . 
E 3 HOH B 28 328 54 HOH HOH . 
E 3 HOH B 29 329 51 HOH HOH . 
E 3 HOH B 30 330 43 HOH HOH . 
E 3 HOH B 31 331 38 HOH HOH . 
E 3 HOH B 32 332 59 HOH HOH . 
E 3 HOH B 33 333 58 HOH HOH . 
E 3 HOH B 34 334 90 HOH HOH . 
E 3 HOH B 35 335 8 HOH HOH . 
E 3 HOH B 36 336 78 HOH HOH . 
E 3 HOH B 37 337 61 HOH HOH . 
E 3 HOH B 38 338 55 HOH HOH . 
E 3 HOH B 39 339 84 HOH HOH . 
E 3 HOH B 40 340 35 HOH HOH . 
E 3 HOH B 41 341 103 HOH HOH . 
E 3 HOH B 42 342 79 HOH HOH . 
E 3 HOH B 43 343 50 HOH HOH . 
F 3 HOH A 1 301 34 HOH HOH . 
F 3 HOH A 2 302 53 HOH HOH . 
F 3 HOH A 3 303 91 HOH HOH . 
F 3 HOH A 4 304 19 HOH HOH . 
F 3 HOH A 5 305 95 HOH HOH . 
F 3 HOH A 6 306 13 HOH HOH . 
F 3 HOH A 7 307 5 HOH HOH . 
F 3 HOH A 8 308 17 HOH HOH . 
F 3 HOH A 9 309 11 HOH HOH . 
F 3 HOH A 10 310 14 HOH HOH . 
F 3 HOH A 11 311 74 HOH HOH . 
F 3 HOH A 12 312 12 HOH HOH . 
F 3 HOH A 13 313 49 HOH HOH . 
F 3 HOH A 14 314 97 HOH HOH . 
F 3 HOH A 15 315 57 HOH HOH . 
F 3 HOH A 16 316 41 HOH HOH . 
F 3 HOH A 17 317 75 HOH HOH . 
F 3 HOH A 18 318 9 HOH HOH . 
F 3 HOH A 19 319 2 HOH HOH . 
F 3 HOH A 20 320 76 HOH HOH . 
F 3 HOH A 21 321 31 HOH HOH . 
F 3 HOH A 22 322 28 HOH HOH . 
F 3 HOH A 23 323 45 HOH HOH . 
F 3 HOH A 24 324 96 HOH HOH . 
F 3 HOH A 25 325 36 HOH HOH . 
F 3 HOH A 26 326 88 HOH HOH . 
F 3 HOH A 27 327 67 HOH HOH . 
F 3 HOH A 28 328 69 HOH HOH . 
F 3 HOH A 29 329 99 HOH HOH . 
F 3 HOH A 30 330 73 HOH HOH . 
F 3 HOH A 31 331 102 HOH HOH . 
F 3 HOH A 32 332 101 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N9 ADZ . . . D 2 -0.75 -15.452 -3.36 1 31.97 0 N9 ADZ 201 A 1 
HETATM 2 C C8 ADZ . . . D 2 0.523 -15.684 -3.79 1 30.57 0 C8 ADZ 201 A 1 
HETATM 3 N N7 ADZ . . . D 2 1.049 -14.693 -4.496 1 29.49 0 N7 ADZ 201 A 1 
HETATM 4 C C5 ADZ . . . D 2 0.008 -13.782 -4.532 1 30.75 0 C5 ADZ 201 A 1 
HETATM 5 C C6 ADZ . . . D 2 -0.051 -12.537 -5.129 1 26.54 0 C6 ADZ 201 A 1 
HETATM 6 N N6 ADZ . . . D 2 1.036 -12.1 -5.796 1 25.74 0 N6 ADZ 201 A 1 
HETATM 7 N N1 ADZ . . . D 2 -1.197 -11.808 -4.952 1 24.96 0 N1 ADZ 201 A 1 
HETATM 8 C C2 ADZ . . . D 2 -2.243 -12.357 -4.314 1 27.81 0 C2 ADZ 201 A 1 
HETATM 9 N N3 ADZ . . . D 2 -2.325 -13.58 -3.763 1 29.59 0 N3 ADZ 201 A 1 
HETATM 10 C C4 ADZ . . . D 2 -1.136 -14.234 -3.895 1 31.35 0 C4 ADZ 201 A 1 
HETATM 11 C C1' ADZ . . . D 2 -1.551 -16.399 -2.569 1 37.65 0 C1' ADZ 201 A 1 
HETATM 12 H H8 ADZ . . . D 2 0.993 -16.481 -3.582 1 30.65 0 H8 ADZ 201 A 1 
HETATM 13 H H6N1 ADZ . . . D 2 1.752 -12.604 -5.842 1 25.97 0 H6N1 ADZ 201 A 1 
HETATM 14 H H6N2 ADZ . . . D 2 1.021 -11.312 -6.182 1 25.96 0 H6N2 ADZ 201 A 1 
HETATM 15 H H2 ADZ . . . D 2 -3.028 -11.832 -4.278 1 27.91 0 H2 ADZ 201 A 1 
HETATM 16 H "H1'1" ADZ . . . D 2 -2.444 -16.046 -2.451 1 36.07 0 "H1'1" ADZ 201 A 1 
HETATM 17 H "H1'2" ADZ . . . D 2 -1.137 -16.527 -1.703 1 35.76 0 "H1'2" ADZ 201 A 1 
HETATM 18 H "H1'3" ADZ . . . D 2 -1.598 -17.248 -3.032 1 36.08 0 "H1'3" ADZ 201 A 1 
#
_model_server_stats.io_time_ms              20 
_model_server_stats.parse_time_ms           20 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           258 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           18 
#