data_8P3W
#
_model_server_result.job_id            O33XS3C5qZpXxGJttevVCw 
_model_server_result.datetime_utc      '2024-10-18 12:26:33' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8p3w 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"Q","auth_seq_id":1002}' 
#
_entry.id    8P3W 
#
_exptl.entry_id    8P3W 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              356.54 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8P3W 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8P3W 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    octameric 
_pdbx_struct_assembly.oligomeric_count      8 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 J N N 
? 4 L N N 
? 4 O N N 
? 4 Q N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 E SG CYS 39 E CYS 40 1_555 E SG CYS 67 E CYS 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? 
disulf ? disulf2 E SG CYS 66 E CYS 67 1_555 E SG CYS 76 E CYS 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? 
disulf ? disulf3 F SG CYS 39 F CYS 40 1_555 F SG CYS 67 F CYS 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf4 F SG CYS 66 F CYS 67 1_555 F SG CYS 76 F CYS 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf5 G SG CYS 39 G CYS 40 1_555 G SG CYS 67 G CYS 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? 
disulf ? disulf6 G SG CYS 66 G CYS 67 1_555 G SG CYS 76 G CYS 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? 
disulf ? disulf7 H SG CYS 39 H CYS 40 1_555 H SG CYS 67 H CYS 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf8 H SG CYS 66 H CYS 67 1_555 H SG CYS 76 H CYS 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
#
_chem_comp.formula           'C21 H40 O4' 
_chem_comp.formula_weight    356.54 
_chem_comp.id                OLC 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     1-Oleoyl-R-glycerol 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C18 C17 OLC sing 237 n n 
C10 C9 OLC doub 238 n n 
C10 C11 OLC sing 239 n n 
C9 C8 OLC sing 240 n n 
C17 C16 OLC sing 241 z n 
C11 C12 OLC sing 242 n n 
C8 C7 OLC sing 243 n n 
C24 C22 OLC sing 244 n n 
C24 O25 OLC sing 245 n n 
C16 C15 OLC sing 246 n n 
C12 C13 OLC sing 247 n n 
C7 C6 OLC sing 248 n n 
C15 C14 OLC sing 249 n n 
C13 C14 OLC sing 250 n n 
C6 C5 OLC sing 251 n n 
C5 C4 OLC sing 252 n n 
C4 C3 OLC sing 253 n n 
C3 C2 OLC sing 254 n n 
C2 C1 OLC sing 255 n n 
C21 C22 OLC sing 256 n n 
C21 O20 OLC sing 257 n n 
C1 O19 OLC doub 258 n n 
C1 O20 OLC sing 259 n n 
C22 O23 OLC sing 260 n n 
C18 H18 OLC sing 261 n n 
C18 H18A OLC sing 262 n n 
C18 H18B OLC sing 263 n n 
C10 H10 OLC sing 264 n n 
C9 H9 OLC sing 265 n n 
C17 H17 OLC sing 266 n n 
C17 H17A OLC sing 267 n n 
C11 H11 OLC sing 268 n n 
C11 H11A OLC sing 269 n n 
C8 H8 OLC sing 270 n n 
C8 H8A OLC sing 271 n n 
C24 H24 OLC sing 272 n n 
C24 H24A OLC sing 273 n n 
C16 H16 OLC sing 274 n n 
C16 H16A OLC sing 275 n n 
C12 H12 OLC sing 276 n n 
C12 H12A OLC sing 277 n n 
C7 H7 OLC sing 278 n n 
C7 H7A OLC sing 279 n n 
C15 H15 OLC sing 280 n n 
C15 H15A OLC sing 281 n n 
C13 H13 OLC sing 282 n n 
C13 H13A OLC sing 283 n n 
C6 H6 OLC sing 284 n n 
C6 H6A OLC sing 285 n n 
C14 H14 OLC sing 286 n n 
C14 H14A OLC sing 287 n n 
C5 H5 OLC sing 288 n n 
C5 H5A OLC sing 289 n n 
C4 H4 OLC sing 290 n n 
C4 H4A OLC sing 291 n n 
C3 H3 OLC sing 292 n n 
C3 H3A OLC sing 293 n n 
C2 H2 OLC sing 294 n n 
C2 H2A OLC sing 295 n n 
C21 H21 OLC sing 296 n n 
C21 H21A OLC sing 297 n n 
C22 H22 OLC sing 298 n n 
O25 HO25 OLC sing 299 n n 
O23 HO23 OLC sing 300 n n 
#
_atom_sites.entry_id                     8P3W 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 3 PLM A 1 1001 1001 PLM PLM . 
J 4 OLC A 1 1002 1101 OLC OLC . 
K 3 PLM B 1 1001 1001 PLM PLM . 
L 4 OLC B 1 1002 1101 OLC OLC . 
M 5 POV B 1 1003 1201 POV POV . 
N 3 PLM C 1 1001 1001 PLM PLM . 
O 4 OLC C 1 1002 1101 OLC OLC . 
P 3 PLM D 1 1001 1001 PLM PLM . 
Q 4 OLC D 1 1002 1101 OLC OLC . 
R 5 POV D 1 1003 1201 POV POV . 
S 5 POV E 1 1201 1201 POV POV . 
T 5 POV F 1 1301 1301 POV POV . 
U 5 POV G 1 1201 1201 POV POV . 
V 5 POV H 1 1301 1301 POV POV . 
W 6 HOH A 1 1101 21 HOH HOH . 
W 6 HOH A 2 1102 3 HOH HOH . 
W 6 HOH A 3 1103 5 HOH HOH . 
X 6 HOH B 1 1101 22 HOH HOH . 
X 6 HOH B 2 1102 16 HOH HOH . 
X 6 HOH B 3 1103 20 HOH HOH . 
X 6 HOH B 4 1104 8 HOH HOH . 
X 6 HOH B 5 1105 11 HOH HOH . 
X 6 HOH B 6 1106 12 HOH HOH . 
X 6 HOH B 7 1107 17 HOH HOH . 
X 6 HOH B 8 1108 14 HOH HOH . 
X 6 HOH B 9 1109 24 HOH HOH . 
Y 6 HOH C 1 1101 14 HOH HOH . 
Y 6 HOH C 2 1102 21 HOH HOH . 
Y 6 HOH C 3 1103 8 HOH HOH . 
Y 6 HOH C 4 1104 2 HOH HOH . 
Y 6 HOH C 5 1105 15 HOH HOH . 
Y 6 HOH C 6 1106 3 HOH HOH . 
Z 6 HOH D 1 1101 22 HOH HOH . 
Z 6 HOH D 2 1102 20 HOH HOH . 
Z 6 HOH D 3 1103 16 HOH HOH . 
Z 6 HOH D 4 1104 12 HOH HOH . 
Z 6 HOH D 5 1105 2 HOH HOH . 
Z 6 HOH D 6 1106 11 HOH HOH . 
Z 6 HOH D 7 1107 15 HOH HOH . 
Z 6 HOH D 8 1108 17 HOH HOH . 
Z 6 HOH D 9 1109 25 HOH HOH . 
AA 6 HOH E 1 1301 23 HOH HOH . 
BA 6 HOH F 1 1401 18 HOH HOH . 
BA 6 HOH F 2 1402 19 HOH HOH . 
CA 6 HOH G 1 1301 23 HOH HOH . 
DA 6 HOH H 1 1401 18 HOH HOH . 
DA 6 HOH H 2 1402 19 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C18 OLC . . . Q 4 149.725 163.451 199.465 1 118.52 ? C18 OLC 1002 D 1 
HETATM 2 C C10 OLC . . . Q 4 150.544 167.92 192.144 1 103.78 ? C10 OLC 1002 D 1 
HETATM 3 C C9 OLC . . . Q 4 150.418 168.338 190.903 1 85.37 ? C9 OLC 1002 D 1 
HETATM 4 C C17 OLC . . . Q 4 149.901 164.565 198.46 1 103.53 ? C17 OLC 1002 D 1 
HETATM 5 C C11 OLC . . . Q 4 149.548 167.313 193.082 1 108.22 ? C11 OLC 1002 D 1 
HETATM 6 C C8 OLC . . . Q 4 149.754 167.682 189.729 1 88.64 ? C8 OLC 1002 D 1 
HETATM 7 C C24 OLC . . . Q 4 143.867 168.358 178.611 1 125 ? C24 OLC 1002 D 1 
HETATM 8 C C16 OLC . . . Q 4 148.712 165.456 198.228 1 89.85 ? C16 OLC 1002 D 1 
HETATM 9 C C12 OLC . . . Q 4 149.229 168.248 194.182 1 105.12 ? C12 OLC 1002 D 1 
HETATM 10 C C7 OLC . . . Q 4 148.59 168.465 189.191 1 80.32 ? C7 OLC 1002 D 1 
HETATM 11 C C15 OLC . . . Q 4 148.583 165.853 196.78 1 93.7 ? C15 OLC 1002 D 1 
HETATM 12 C C13 OLC . . . Q 4 148.191 167.744 195.156 1 99.12 ? C13 OLC 1002 D 1 
HETATM 13 C C6 OLC . . . Q 4 148.745 168.952 187.756 1 97.07 ? C6 OLC 1002 D 1 
HETATM 14 C C14 OLC . . . Q 4 148.748 167.33 196.502 1 90.34 ? C14 OLC 1002 D 1 
HETATM 15 C C5 OLC . . . Q 4 147.98 168.126 186.744 1 106.88 ? C5 OLC 1002 D 1 
HETATM 16 C C4 OLC . . . Q 4 146.638 168.731 186.408 1 104.93 ? C4 OLC 1002 D 1 
HETATM 17 C C3 OLC . . . Q 4 145.751 167.834 185.562 1 122.02 ? C3 OLC 1002 D 1 
HETATM 18 C C2 OLC . . . Q 4 144.959 168.589 184.548 1 119.98 ? C2 OLC 1002 D 1 
HETATM 19 C C21 OLC . . . Q 4 144.908 168.265 180.923 1 100.47 ? C21 OLC 1002 D 1 
HETATM 20 C C1 OLC . . . Q 4 145.547 168.49 183.175 1 99.36 ? C1 OLC 1002 D 1 
HETATM 21 C C22 OLC . . . Q 4 143.648 168.426 180.108 1 120.47 ? C22 OLC 1002 D 1 
HETATM 22 O O19 OLC . . . Q 4 146.681 168.153 182.965 1 118 ? O19 OLC 1002 D 1 
HETATM 23 O O25 OLC . . . Q 4 143.493 167.09 178.075 1 114.15 ? O25 OLC 1002 D 1 
HETATM 24 O O23 OLC . . . Q 4 142.726 167.425 180.532 1 131.19 ? O23 OLC 1002 D 1 
HETATM 25 O O20 OLC . . . Q 4 144.679 168.832 182.229 1 87.68 ? O20 OLC 1002 D 1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    24 
_model_server_stats.query_time_ms           342 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           25 
#