data_8P4Z # _model_server_result.job_id wayRZoXFj-x5eHvZxDavdg _model_server_result.datetime_utc '2025-03-01 01:13:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8p4z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":404}' # _entry.id 8P4Z # _exptl.entry_id 8P4Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.173 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TRIETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8P4Z _cell.length_a 188.17 _cell.length_b 188.17 _cell.length_c 188.17 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8P4Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 213 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 3 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,O 1 1 B,G,H,I,J,K,L,M,N,P 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H14 O4' _chem_comp.formula_weight 150.173 _chem_comp.id PGE _chem_comp.mon_nstd_flag . _chem_comp.name 'TRIETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PGE sing 287 n n C1 C2 PGE sing 288 n n C1 H1 PGE sing 289 n n C1 H12 PGE sing 290 n n O1 HO1 PGE sing 291 n n C2 O2 PGE sing 292 n n C2 H2 PGE sing 293 n n C2 H22 PGE sing 294 n n O2 C3 PGE sing 295 n n C3 C4 PGE sing 296 n n C3 H3 PGE sing 297 n n C3 H32 PGE sing 298 n n C4 O3 PGE sing 299 n n C4 H4 PGE sing 300 n n C4 H42 PGE sing 301 n n O4 C6 PGE sing 302 n n O4 HO4 PGE sing 303 n n C6 C5 PGE sing 304 n n C6 H6 PGE sing 305 n n C6 H62 PGE sing 306 n n C5 O3 PGE sing 307 n n C5 H5 PGE sing 308 n n C5 H52 PGE sing 309 n n # _atom_sites.entry_id 8P4Z _atom_sites.fract_transf_matrix[1][1] 0.005314 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005314 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005314 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 WZ8 A 1 401 401 WZ8 LDC . D 3 GOL A 1 402 403 GOL GOL . E 3 GOL A 1 403 404 GOL GOL . F 4 PGE A 1 404 405 PGE PGE . G 2 WZ8 B 1 401 401 WZ8 LDC . H 3 GOL B 1 402 402 GOL GOL . I 3 GOL B 1 403 405 GOL GOL . J 3 GOL B 1 404 406 GOL GOL . K 3 GOL B 1 405 408 GOL GOL . L 3 GOL B 1 406 409 GOL GOL . M 5 1PE B 1 407 410 1PE 1PE . N 3 GOL B 1 408 411 GOL GOL . O 6 HOH A 1 501 2 HOH HOH . O 6 HOH A 2 502 9 HOH HOH . O 6 HOH A 3 503 7 HOH HOH . O 6 HOH A 4 504 4 HOH HOH . P 6 HOH B 1 501 12 HOH HOH . P 6 HOH B 2 502 6 HOH HOH . P 6 HOH B 3 503 17 HOH HOH . P 6 HOH B 4 504 26 HOH HOH . P 6 HOH B 5 505 11 HOH HOH . P 6 HOH B 6 506 24 HOH HOH . P 6 HOH B 7 507 15 HOH HOH . P 6 HOH B 8 508 3 HOH HOH . P 6 HOH B 9 509 27 HOH HOH . P 6 HOH B 10 510 25 HOH HOH . P 6 HOH B 11 511 19 HOH HOH . P 6 HOH B 12 512 1 HOH HOH . P 6 HOH B 13 513 14 HOH HOH . P 6 HOH B 14 514 18 HOH HOH . P 6 HOH B 15 515 13 HOH HOH . P 6 HOH B 16 516 5 HOH HOH . P 6 HOH B 17 517 22 HOH HOH . P 6 HOH B 18 518 10 HOH HOH . P 6 HOH B 19 519 8 HOH HOH . P 6 HOH B 20 520 16 HOH HOH . P 6 HOH B 21 521 21 HOH HOH . P 6 HOH B 22 522 20 HOH HOH . P 6 HOH B 23 523 23 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGE . . . F 4 -17.098 -12.606 46.906 1 122.31 ? C1 PGE 404 A 1 HETATM 2 O O1 PGE . . . F 4 -16.16 -11.78 46.231 1 122.43 ? O1 PGE 404 A 1 HETATM 3 C C2 PGE . . . F 4 -18.374 -12.738 46.135 1 122.14 ? C2 PGE 404 A 1 HETATM 4 O O2 PGE . . . F 4 -18.189 -13.613 45.03 1 122.06 ? O2 PGE 404 A 1 HETATM 5 C C3 PGE . . . F 4 -18.444 -14.976 45.361 1 121.9 ? C3 PGE 404 A 1 HETATM 6 C C4 PGE . . . F 4 -19.153 -15.686 44.249 1 121.49 ? C4 PGE 404 A 1 HETATM 7 O O4 PGE . . . F 4 -22.834 -14.848 41.383 1 119.42 ? O4 PGE 404 A 1 HETATM 8 C C6 PGE . . . F 4 -22.29 -15.402 42.565 1 119.75 ? C6 PGE 404 A 1 HETATM 9 C C5 PGE . . . F 4 -20.847 -15.035 42.723 1 120.32 ? C5 PGE 404 A 1 HETATM 10 O O3 PGE . . . F 4 -20.471 -15.172 44.088 1 121.01 ? O3 PGE 404 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 10 #