data_8P8E # _model_server_result.job_id R2LMumESfVQHLSH8B0j1LQ _model_server_result.datetime_utc '2024-10-10 08:22:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8p8e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1}' # _entry.id 8P8E # _exptl.entry_id 8P8E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8P8E _cell.length_a 41.796 _cell.length_b 43.201 _cell.length_c 126.181 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8P8E _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 270 n n C1 C2 PEG sing 271 n n C1 H11 PEG sing 272 n n C1 H12 PEG sing 273 n n O1 HO1 PEG sing 274 n n C2 O2 PEG sing 275 n n C2 H21 PEG sing 276 n n C2 H22 PEG sing 277 n n O2 C3 PEG sing 278 n n C3 C4 PEG sing 279 n n C3 H31 PEG sing 280 n n C3 H32 PEG sing 281 n n C4 O4 PEG sing 282 n n C4 H41 PEG sing 283 n n C4 H42 PEG sing 284 n n O4 HO4 PEG sing 285 n n # _atom_sites.entry_id 8P8E _atom_sites.fract_transf_matrix[1][1] 0.023926 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023148 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007925 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EPE EEE 1 1 1 EPE EPE . C 2 EPE EaE 1 2 2 EPE EPE . D 3 PEG GGG 1 1 1 PEG PEG . E 4 HOH WWW 1 1 1 HOH HOH . E 4 HOH WWW 2 2 2 HOH HOH . E 4 HOH WWW 3 3 3 HOH HOH . E 4 HOH WWW 4 4 4 HOH HOH . E 4 HOH WWW 5 5 5 HOH HOH . E 4 HOH WWW 6 6 6 HOH HOH . E 4 HOH WWW 7 7 7 HOH HOH . E 4 HOH WWW 8 8 8 HOH HOH . E 4 HOH WWW 9 9 9 HOH HOH . E 4 HOH WWW 10 10 10 HOH HOH . E 4 HOH WWW 11 11 11 HOH HOH . E 4 HOH WWW 12 12 12 HOH HOH . E 4 HOH WWW 13 13 13 HOH HOH . E 4 HOH WWW 14 14 14 HOH HOH . E 4 HOH WWW 15 15 15 HOH HOH . E 4 HOH WWW 16 16 16 HOH HOH . E 4 HOH WWW 17 17 17 HOH HOH . E 4 HOH WWW 18 18 18 HOH HOH . E 4 HOH WWW 19 19 19 HOH HOH . E 4 HOH WWW 20 20 20 HOH HOH . E 4 HOH WWW 21 21 21 HOH HOH . E 4 HOH WWW 22 22 22 HOH HOH . E 4 HOH WWW 23 23 23 HOH HOH . E 4 HOH WWW 24 24 24 HOH HOH . E 4 HOH WWW 25 25 25 HOH HOH . E 4 HOH WWW 26 26 26 HOH HOH . E 4 HOH WWW 27 27 27 HOH HOH . E 4 HOH WWW 28 28 28 HOH HOH . E 4 HOH WWW 29 29 29 HOH HOH . E 4 HOH WWW 30 30 30 HOH HOH . E 4 HOH WWW 31 31 31 HOH HOH . E 4 HOH WWW 32 32 32 HOH HOH . E 4 HOH WWW 33 33 33 HOH HOH . E 4 HOH WWW 34 34 34 HOH HOH . E 4 HOH WWW 35 35 35 HOH HOH . E 4 HOH WWW 36 36 36 HOH HOH . E 4 HOH WWW 37 37 37 HOH HOH . E 4 HOH WWW 38 38 38 HOH HOH . E 4 HOH WWW 39 39 39 HOH HOH . E 4 HOH WWW 40 40 40 HOH HOH . E 4 HOH WWW 41 41 41 HOH HOH . E 4 HOH WWW 42 42 42 HOH HOH . E 4 HOH WWW 43 43 43 HOH HOH . E 4 HOH WWW 44 44 44 HOH HOH . E 4 HOH WWW 45 45 45 HOH HOH . E 4 HOH WWW 46 46 46 HOH HOH . E 4 HOH WWW 47 47 47 HOH HOH . E 4 HOH WWW 48 48 48 HOH HOH . E 4 HOH WWW 49 49 49 HOH HOH . E 4 HOH WWW 50 50 50 HOH HOH . E 4 HOH WWW 51 51 51 HOH HOH . E 4 HOH WWW 52 52 52 HOH HOH . E 4 HOH WWW 53 53 53 HOH HOH . E 4 HOH WWW 54 54 54 HOH HOH . E 4 HOH WWW 55 55 55 HOH HOH . E 4 HOH WWW 56 56 56 HOH HOH . E 4 HOH WWW 57 57 57 HOH HOH . E 4 HOH WWW 58 58 58 HOH HOH . E 4 HOH WWW 59 59 59 HOH HOH . E 4 HOH WWW 60 60 60 HOH HOH . E 4 HOH WWW 61 61 61 HOH HOH . E 4 HOH WWW 62 62 62 HOH HOH . E 4 HOH WWW 63 63 63 HOH HOH . E 4 HOH WWW 64 64 64 HOH HOH . E 4 HOH WWW 65 65 65 HOH HOH . E 4 HOH WWW 66 66 66 HOH HOH . E 4 HOH WWW 67 67 67 HOH HOH . E 4 HOH WWW 68 68 68 HOH HOH . E 4 HOH WWW 69 69 69 HOH HOH . E 4 HOH WWW 70 70 70 HOH HOH . E 4 HOH WWW 71 71 71 HOH HOH . E 4 HOH WWW 72 72 72 HOH HOH . E 4 HOH WWW 73 73 73 HOH HOH . E 4 HOH WWW 74 74 74 HOH HOH . E 4 HOH WWW 75 75 75 HOH HOH . E 4 HOH WWW 76 76 76 HOH HOH . E 4 HOH WWW 77 77 77 HOH HOH . E 4 HOH WWW 78 78 78 HOH HOH . E 4 HOH WWW 79 79 79 HOH HOH . E 4 HOH WWW 80 80 80 HOH HOH . E 4 HOH WWW 81 81 81 HOH HOH . E 4 HOH WWW 82 82 82 HOH HOH . E 4 HOH WWW 83 83 83 HOH HOH . E 4 HOH WWW 84 84 84 HOH HOH . E 4 HOH WWW 85 85 85 HOH HOH . E 4 HOH WWW 86 86 86 HOH HOH . E 4 HOH WWW 87 87 87 HOH HOH . E 4 HOH WWW 88 88 88 HOH HOH . E 4 HOH WWW 89 89 89 HOH HOH . E 4 HOH WWW 90 90 90 HOH HOH . E 4 HOH WWW 91 91 91 HOH HOH . E 4 HOH WWW 92 92 92 HOH HOH . E 4 HOH WWW 93 93 93 HOH HOH . E 4 HOH WWW 94 94 94 HOH HOH . E 4 HOH WWW 95 95 95 HOH HOH . E 4 HOH WWW 96 96 96 HOH HOH . E 4 HOH WWW 97 97 97 HOH HOH . E 4 HOH WWW 98 98 98 HOH HOH . E 4 HOH WWW 99 99 99 HOH HOH . E 4 HOH WWW 100 100 100 HOH HOH . E 4 HOH WWW 101 101 101 HOH HOH . E 4 HOH WWW 102 102 102 HOH HOH . E 4 HOH WWW 103 103 103 HOH HOH . E 4 HOH WWW 104 104 104 HOH HOH . E 4 HOH WWW 105 105 105 HOH HOH . E 4 HOH WWW 106 106 106 HOH HOH . E 4 HOH WWW 107 107 107 HOH HOH . E 4 HOH WWW 108 108 108 HOH HOH . E 4 HOH WWW 109 109 109 HOH HOH . E 4 HOH WWW 110 110 110 HOH HOH . E 4 HOH WWW 111 111 111 HOH HOH . E 4 HOH WWW 112 112 112 HOH HOH . E 4 HOH WWW 113 113 113 HOH HOH . E 4 HOH WWW 114 114 114 HOH HOH . E 4 HOH WWW 115 115 115 HOH HOH . E 4 HOH WWW 116 116 116 HOH HOH . E 4 HOH WWW 117 117 117 HOH HOH . E 4 HOH WWW 118 118 118 HOH HOH . E 4 HOH WWW 119 119 119 HOH HOH . E 4 HOH WWW 120 120 120 HOH HOH . E 4 HOH WWW 121 121 121 HOH HOH . E 4 HOH WWW 122 122 122 HOH HOH . E 4 HOH WWW 123 123 123 HOH HOH . E 4 HOH WWW 124 124 124 HOH HOH . E 4 HOH WWW 125 125 125 HOH HOH . E 4 HOH WWW 126 126 126 HOH HOH . E 4 HOH WWW 127 127 127 HOH HOH . E 4 HOH WWW 128 128 128 HOH HOH . E 4 HOH WWW 129 129 129 HOH HOH . E 4 HOH WWW 130 130 130 HOH HOH . E 4 HOH WWW 131 131 131 HOH HOH . E 4 HOH WWW 132 132 132 HOH HOH . E 4 HOH WWW 133 133 133 HOH HOH . E 4 HOH WWW 134 134 134 HOH HOH . E 4 HOH WWW 135 135 135 HOH HOH . E 4 HOH WWW 136 136 136 HOH HOH . E 4 HOH WWW 137 137 137 HOH HOH . E 4 HOH WWW 138 138 138 HOH HOH . E 4 HOH WWW 139 139 139 HOH HOH . E 4 HOH WWW 140 140 140 HOH HOH . E 4 HOH WWW 141 141 141 HOH HOH . E 4 HOH WWW 142 142 142 HOH HOH . E 4 HOH WWW 143 143 143 HOH HOH . E 4 HOH WWW 144 144 144 HOH HOH . E 4 HOH WWW 145 145 145 HOH HOH . E 4 HOH WWW 146 146 146 HOH HOH . E 4 HOH WWW 147 147 147 HOH HOH . E 4 HOH WWW 148 148 148 HOH HOH . E 4 HOH WWW 149 149 149 HOH HOH . E 4 HOH WWW 150 150 150 HOH HOH . E 4 HOH WWW 151 151 151 HOH HOH . E 4 HOH WWW 152 152 152 HOH HOH . E 4 HOH WWW 153 153 153 HOH HOH . E 4 HOH WWW 154 154 154 HOH HOH . E 4 HOH WWW 155 155 155 HOH HOH . E 4 HOH WWW 156 156 156 HOH HOH . E 4 HOH WWW 157 157 157 HOH HOH . E 4 HOH WWW 158 158 158 HOH HOH . E 4 HOH WWW 159 159 159 HOH HOH . E 4 HOH WWW 160 160 160 HOH HOH . E 4 HOH WWW 161 161 161 HOH HOH . E 4 HOH WWW 162 162 162 HOH HOH . E 4 HOH WWW 163 163 163 HOH HOH . E 4 HOH WWW 164 164 164 HOH HOH . E 4 HOH WWW 165 165 165 HOH HOH . E 4 HOH WWW 166 166 166 HOH HOH . E 4 HOH WWW 167 167 167 HOH HOH . E 4 HOH WWW 168 168 168 HOH HOH . E 4 HOH WWW 169 169 169 HOH HOH . E 4 HOH WWW 170 170 170 HOH HOH . E 4 HOH WWW 171 171 171 HOH HOH . E 4 HOH WWW 172 172 172 HOH HOH . E 4 HOH WWW 173 173 173 HOH HOH . E 4 HOH WWW 174 174 174 HOH HOH . E 4 HOH WWW 175 175 175 HOH HOH . E 4 HOH WWW 176 176 176 HOH HOH . E 4 HOH WWW 177 177 177 HOH HOH . E 4 HOH WWW 178 178 178 HOH HOH . E 4 HOH WWW 179 179 179 HOH HOH . E 4 HOH WWW 180 180 180 HOH HOH . E 4 HOH WWW 181 181 181 HOH HOH . E 4 HOH WWW 182 182 182 HOH HOH . E 4 HOH WWW 183 183 183 HOH HOH . E 4 HOH WWW 184 184 184 HOH HOH . E 4 HOH WWW 185 185 185 HOH HOH . E 4 HOH WWW 186 186 186 HOH HOH . E 4 HOH WWW 187 187 187 HOH HOH . E 4 HOH WWW 188 188 188 HOH HOH . E 4 HOH WWW 189 189 189 HOH HOH . E 4 HOH WWW 190 190 190 HOH HOH . E 4 HOH WWW 191 191 191 HOH HOH . E 4 HOH WWW 192 192 192 HOH HOH . E 4 HOH WWW 193 193 193 HOH HOH . E 4 HOH WWW 194 194 194 HOH HOH . E 4 HOH WWW 195 195 195 HOH HOH . E 4 HOH WWW 196 196 196 HOH HOH . E 4 HOH WWW 197 197 197 HOH HOH . E 4 HOH WWW 198 198 198 HOH HOH . E 4 HOH WWW 199 199 199 HOH HOH . E 4 HOH WWW 200 200 200 HOH HOH . E 4 HOH WWW 201 201 201 HOH HOH . E 4 HOH WWW 202 202 202 HOH HOH . E 4 HOH WWW 203 203 203 HOH HOH . E 4 HOH WWW 204 204 204 HOH HOH . E 4 HOH WWW 205 205 205 HOH HOH . E 4 HOH WWW 206 206 206 HOH HOH . E 4 HOH WWW 207 207 207 HOH HOH . E 4 HOH WWW 208 208 208 HOH HOH . E 4 HOH WWW 209 209 209 HOH HOH . E 4 HOH WWW 210 210 210 HOH HOH . E 4 HOH WWW 211 211 211 HOH HOH . E 4 HOH WWW 212 212 212 HOH HOH . E 4 HOH WWW 213 213 213 HOH HOH . E 4 HOH WWW 214 214 214 HOH HOH . E 4 HOH WWW 215 215 215 HOH HOH . E 4 HOH WWW 216 216 216 HOH HOH . E 4 HOH WWW 217 217 217 HOH HOH . E 4 HOH WWW 218 218 218 HOH HOH . E 4 HOH WWW 219 219 219 HOH HOH . E 4 HOH WWW 220 220 220 HOH HOH . E 4 HOH WWW 221 221 221 HOH HOH . E 4 HOH WWW 222 222 222 HOH HOH . E 4 HOH WWW 223 223 223 HOH HOH . E 4 HOH WWW 224 224 224 HOH HOH . E 4 HOH WWW 225 225 225 HOH HOH . E 4 HOH WWW 226 226 226 HOH HOH . E 4 HOH WWW 227 227 227 HOH HOH . E 4 HOH WWW 228 228 228 HOH HOH . E 4 HOH WWW 229 229 229 HOH HOH . E 4 HOH WWW 230 230 230 HOH HOH . E 4 HOH WWW 231 231 231 HOH HOH . E 4 HOH WWW 232 232 232 HOH HOH . E 4 HOH WWW 233 233 233 HOH HOH . E 4 HOH WWW 234 234 234 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . D 3 12.09 0.173 -1.024 1 49.73 0 C1 PEG 1 GGG 1 HETATM 2 O O1 PEG . . . D 3 10.828 0.522 -0.472 1 65.1 0 O1 PEG 1 GGG 1 HETATM 3 C C2 PEG . . . D 3 12.534 -1.219 -0.673 1 47.17 0 C2 PEG 1 GGG 1 HETATM 4 O O2 PEG . . . D 3 12.513 -2.049 -1.834 1 46.64 0 O2 PEG 1 GGG 1 HETATM 5 C C3 PEG . . . D 3 13.267 -3.256 -1.707 1 35.41 0 C3 PEG 1 GGG 1 HETATM 6 C C4 PEG . . . D 3 12.705 -4.099 -0.616 1 35.81 0 C4 PEG 1 GGG 1 HETATM 7 O O4 PEG . . . D 3 12.847 -5.456 -0.876 1 25.29 0 O4 PEG 1 GGG 1 # _model_server_stats.io_time_ms 46 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 260 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 7 #