data_8P96 # _model_server_result.job_id 6FUoh1NHhFRXJKbZNrQTPg _model_server_result.datetime_utc '2024-11-23 18:19:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8p96 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":603}' # _entry.id 8P96 # _exptl.entry_id 8P96 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8P96 _cell.length_a 94.349 _cell.length_b 94.349 _cell.length_c 444.751 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8P96 _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall 'P 65 2 (x,y,z+1/12)' _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 L N N ? 2 M N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 185 A HIS 185 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? metalc ? metalc2 A ND1 HIS 187 A HIS 187 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.301 ? metalc ? metalc3 A OD2 ASP 189 A ASP 189 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.236 ? metalc ? metalc4 A NE2 HIS 190 A HIS 190 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? metalc ? metalc5 A NE2 HIS 253 A HIS 253 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? metalc ? metalc6 A OD2 ASP 284 A ASP 284 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.535 ? metalc ? metalc7 A OD2 ASP 284 A ASP 284 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? metalc ? metalc8 A NE2 HIS 343 A HIS 343 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc9 C ZN ZN . A ZN 401 1_555 E O12 3PE . A 3PE 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.169 ? metalc ? metalc10 D ZN ZN . A ZN 402 1_555 E O14 3PE . A 3PE 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? metalc ? metalc11 B NE2 HIS 185 B HIS 185 1_555 L ZN ZN . B ZN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? metalc ? metalc12 B ND1 HIS 187 B HIS 187 1_555 L ZN ZN . B ZN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? metalc ? metalc13 B OD2 ASP 189 B ASP 189 1_555 M ZN ZN . B ZN 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.349 ? metalc ? metalc14 B NE2 HIS 190 B HIS 190 1_555 M ZN ZN . B ZN 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? metalc ? metalc15 B NE2 HIS 253 B HIS 253 1_555 L ZN ZN . B ZN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? metalc ? metalc16 B OD2 ASP 284 B ASP 284 1_555 L ZN ZN . B ZN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.602 ? metalc ? metalc17 B OD2 ASP 284 B ASP 284 1_555 M ZN ZN . B ZN 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? metalc ? metalc18 B NE2 HIS 343 B HIS 343 1_555 M ZN ZN . B ZN 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? metalc ? metalc19 L ZN ZN . B ZN 603 1_555 N O12 3PE . B 3PE 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.248 ? metalc ? metalc20 M ZN ZN . B ZN 604 1_555 N O14 3PE . B 3PE 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8P96 _atom_sites.fract_transf_matrix[1][1] 0.010599 _atom_sites.fract_transf_matrix[1][2] 0.006119 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012239 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002248 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 401 401 ZN ZN . D 2 ZN A 1 402 402 ZN ZN . E 3 3PE A 1 403 503 3PE 3PE . F 4 DXC A 1 404 602 DXC DXC . G 4 DXC A 1 405 603 DXC DXC . H 4 DXC A 1 406 605 DXC DXC . I 4 DXC A 1 407 604 DXC DXC . J 4 DXC B 1 601 601 DXC DXC . K 4 DXC B 1 602 604 DXC DXC . L 2 ZN B 1 603 401 ZN ZN . M 2 ZN B 1 604 402 ZN ZN . N 3 3PE B 1 605 503 3PE 3PE . O 4 DXC B 1 606 601 DXC DXC . P 4 DXC B 1 607 602 DXC DXC . Q 4 DXC B 1 608 603 DXC DXC . R 4 DXC B 1 609 605 DXC DXC . S 5 XBE B 1 610 100 XBE N3S . T 6 HOH A 1 501 5 HOH HOH . T 6 HOH A 2 502 37 HOH HOH . T 6 HOH A 3 503 41 HOH HOH . T 6 HOH A 4 504 50 HOH HOH . T 6 HOH A 5 505 46 HOH HOH . T 6 HOH A 6 506 34 HOH HOH . T 6 HOH A 7 507 25 HOH HOH . T 6 HOH A 8 508 28 HOH HOH . T 6 HOH A 9 509 35 HOH HOH . T 6 HOH A 10 510 17 HOH HOH . T 6 HOH A 11 511 24 HOH HOH . T 6 HOH A 12 512 45 HOH HOH . T 6 HOH A 13 513 2 HOH HOH . T 6 HOH A 14 514 10 HOH HOH . T 6 HOH A 15 515 26 HOH HOH . T 6 HOH A 16 516 16 HOH HOH . T 6 HOH A 17 517 6 HOH HOH . T 6 HOH A 18 518 29 HOH HOH . T 6 HOH A 19 519 11 HOH HOH . T 6 HOH A 20 520 44 HOH HOH . U 6 HOH B 1 701 31 HOH HOH . U 6 HOH B 2 702 4 HOH HOH . U 6 HOH B 3 703 3 HOH HOH . U 6 HOH B 4 704 47 HOH HOH . U 6 HOH B 5 705 23 HOH HOH . U 6 HOH B 6 706 13 HOH HOH . U 6 HOH B 7 707 18 HOH HOH . U 6 HOH B 8 708 8 HOH HOH . U 6 HOH B 9 709 21 HOH HOH . U 6 HOH B 10 710 36 HOH HOH . U 6 HOH B 11 711 33 HOH HOH . U 6 HOH B 12 712 40 HOH HOH . U 6 HOH B 13 713 1 HOH HOH . U 6 HOH B 14 714 27 HOH HOH . U 6 HOH B 15 715 20 HOH HOH . U 6 HOH B 16 716 42 HOH HOH . U 6 HOH B 17 717 12 HOH HOH . U 6 HOH B 18 718 15 HOH HOH . U 6 HOH B 19 719 38 HOH HOH . U 6 HOH B 20 720 9 HOH HOH . U 6 HOH B 21 721 39 HOH HOH . U 6 HOH B 22 722 48 HOH HOH . U 6 HOH B 23 723 7 HOH HOH . U 6 HOH B 24 724 32 HOH HOH . U 6 HOH B 25 725 43 HOH HOH . U 6 HOH B 26 726 22 HOH HOH . U 6 HOH B 27 727 14 HOH HOH . U 6 HOH B 28 728 19 HOH HOH . U 6 HOH B 29 729 30 HOH HOH . U 6 HOH B 30 730 49 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id L _atom_site.label_entity_id 2 _atom_site.Cartn_x -9.86 _atom_site.Cartn_y 15.866 _atom_site.Cartn_z 171.757 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 62.95 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 603 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 36 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 252 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #