data_8P9B # _model_server_result.job_id dP5S4CBFk52aeJJqe1mp2w _model_server_result.datetime_utc '2024-11-14 18:47:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8p9b # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 8P9B # _exptl.entry_id 8P9B _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 408.452 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-[6-(4-morpholin-4-ylcarbonylphenyl)imidazo[1,2-a]pyridin-3-yl]benzenecarbonitrile _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8P9B _cell.length_a 105.91 _cell.length_b 105.91 _cell.length_c 71.5 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8P9B _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 230 A CYS 299 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.356 ? metalc ? metalc2 A SG CYS 242 A CYS 311 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.36 ? metalc ? metalc3 A SG CYS 245 A CYS 314 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.357 ? # _chem_comp.formula 'C25 H20 N4 O2' _chem_comp.formula_weight 408.452 _chem_comp.id X8K _chem_comp.mon_nstd_flag . _chem_comp.name 4-[6-(4-morpholin-4-ylcarbonylphenyl)imidazo[1,2-a]pyridin-3-yl]benzenecarbonitrile _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OAF CAE X8K sing 374 n n OAF CAG X8K sing 375 n n CAE CAD X8K sing 376 n n CAG CAH X8K sing 377 n n CAD NAC X8K sing 378 n n CAH NAC X8K sing 379 n n NAC CAB X8K sing 380 n n OAA CAB X8K doub 381 n n CAB CAI X8K sing 382 n n CAN CAI X8K doub 383 n y CAN CAM X8K sing 384 n y CAI CAJ X8K sing 385 n y CAM CAL X8K doub 386 n y CAJ CAK X8K doub 387 n y CAL CAK X8K sing 388 n y CAL CAO X8K sing 389 n n CAP CAO X8K sing 390 n y CAP CAQ X8K doub 391 n y CAO CAW X8K doub 392 n y CAQ CAR X8K sing 393 n y CAW NAV X8K sing 394 n y CAR NAV X8K sing 395 n y CAR NAS X8K doub 396 n y NAV CAU X8K sing 397 n y NAS CAT X8K sing 398 n y CAU CAX X8K sing 399 n n CAU CAT X8K doub 400 n y CBC CAX X8K doub 401 n y CBC CBB X8K sing 402 n y CAX CAY X8K sing 403 n y CBB CBA X8K doub 404 n y CAY CAZ X8K doub 405 n y CBA CAZ X8K sing 406 n y CBA CBD X8K sing 407 n n CBD NBE X8K trip 408 n n CAD H1 X8K sing 409 n n CAD H2 X8K sing 410 n n CAE H3 X8K sing 411 n n CAE H4 X8K sing 412 n n CAG H5 X8K sing 413 n n CAG H6 X8K sing 414 n n CAH H7 X8K sing 415 n n CAH H8 X8K sing 416 n n CAN H9 X8K sing 417 n n CAM H10 X8K sing 418 n n CAJ H11 X8K sing 419 n n CAK H12 X8K sing 420 n n CAW H13 X8K sing 421 n n CAP H14 X8K sing 422 n n CAQ H15 X8K sing 423 n n CAT H16 X8K sing 424 n n CAY H17 X8K sing 425 n n CAZ H18 X8K sing 426 n n CBB H19 X8K sing 427 n n CBC H20 X8K sing 428 n n # _atom_sites.entry_id 8P9B _atom_sites.fract_transf_matrix[1][1] 0.009442 _atom_sites.fract_transf_matrix[1][2] 0.005451 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010903 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013986 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 401 531 ZN ZN . C 3 X8K A 1 402 1 X8K DRG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAD X8K . . . C 3 -8.413 72.68 -10.674 1 131.7 0 CAD X8K 402 A 1 HETATM 2 C CAE X8K . . . C 3 -8.964 71.97 -11.899 1 137.55 0 CAE X8K 402 A 1 HETATM 3 O OAF X8K . . . C 3 -8.289 70.698 -12.081 1 139.92 0 OAF X8K 402 A 1 HETATM 4 C CAG X8K . . . C 3 -8.536 69.811 -10.956 1 134.88 0 CAG X8K 402 A 1 HETATM 5 C CAH X8K . . . C 3 -7.791 70.344 -9.719 1 129.24 0 CAH X8K 402 A 1 HETATM 6 N NAC X8K . . . C 3 -7.652 71.841 -9.707 1 114.41 0 NAC X8K 402 A 1 HETATM 7 C CAB X8K . . . C 3 -6.908 72.527 -8.828 1 97.57 0 CAB X8K 402 A 1 HETATM 8 O OAA X8K . . . C 3 -6.875 73.758 -8.893 1 117.79 0 OAA X8K 402 A 1 HETATM 9 C CAI X8K . . . C 3 -6.086 71.875 -7.899 1 78.62 0 CAI X8K 402 A 1 HETATM 10 C CAN X8K . . . C 3 -5.058 71.04 -8.336 1 70.33 0 CAN X8K 402 A 1 HETATM 11 C CAM X8K . . . C 3 -4.217 70.374 -7.446 1 66.15 0 CAM X8K 402 A 1 HETATM 12 C CAJ X8K . . . C 3 -6.216 72.085 -6.534 1 69.52 0 CAJ X8K 402 A 1 HETATM 13 C CAK X8K . . . C 3 -5.37 71.447 -5.644 1 65.97 0 CAK X8K 402 A 1 HETATM 14 C CAL X8K . . . C 3 -4.349 70.59 -6.088 1 67.85 0 CAL X8K 402 A 1 HETATM 15 C CAO X8K . . . C 3 -3.557 69.956 -5.115 1 66.12 0 CAO X8K 402 A 1 HETATM 16 C CAW X8K . . . C 3 -2.988 70.637 -4.034 1 62.9 0 CAW X8K 402 A 1 HETATM 17 N NAV X8K . . . C 3 -2.268 69.897 -3.082 1 68.01 0 NAV X8K 402 A 1 HETATM 18 C CAP X8K . . . C 3 -3.417 68.588 -5.135 1 64.29 0 CAP X8K 402 A 1 HETATM 19 C CAQ X8K . . . C 3 -2.692 67.91 -4.152 1 73.64 0 CAQ X8K 402 A 1 HETATM 20 C CAR X8K . . . C 3 -2.129 68.569 -3.143 1 74.87 0 CAR X8K 402 A 1 HETATM 21 N NAS X8K . . . C 3 -1.418 68.143 -2.096 1 71.42 0 NAS X8K 402 A 1 HETATM 22 C CAT X8K . . . C 3 -1.094 69.213 -1.386 1 70.96 0 CAT X8K 402 A 1 HETATM 23 C CAU X8K . . . C 3 -1.613 70.282 -1.991 1 69.74 0 CAU X8K 402 A 1 HETATM 24 C CAX X8K . . . C 3 -1.506 71.521 -1.517 1 73.51 0 CAX X8K 402 A 1 HETATM 25 C CAY X8K . . . C 3 -0.352 71.937 -0.863 1 79.38 0 CAY X8K 402 A 1 HETATM 26 C CAZ X8K . . . C 3 -0.281 73.231 -0.332 1 82.69 0 CAZ X8K 402 A 1 HETATM 27 C CBA X8K . . . C 3 -1.35 74.115 -0.455 1 86.94 0 CBA X8K 402 A 1 HETATM 28 C CBD X8K . . . C 3 -1.268 75.382 0.04 1 88.43 0 CBD X8K 402 A 1 HETATM 29 N NBE X8K . . . C 3 -1.167 76.283 0.406 1 90.64 0 NBE X8K 402 A 1 HETATM 30 C CBB X8K . . . C 3 -2.496 73.701 -1.085 1 75.22 0 CBB X8K 402 A 1 HETATM 31 C CBC X8K . . . C 3 -2.571 72.411 -1.592 1 76.87 0 CBC X8K 402 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 31 #