data_8P9F # _model_server_result.job_id WAw4zIVAY8xpcP34SY3qaQ _model_server_result.datetime_utc '2024-11-12 20:52:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8p9f # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 8P9F # _exptl.entry_id 8P9F _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 363.413 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ~{N}-(2-aminophenyl)-4-[2-(2-azanyl-5-methyl-4-oxidanyl-phenyl)hydrazinyl]benzamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8P9F _cell.length_a 42.235 _cell.length_b 52.686 _cell.length_c 56.866 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8P9F _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C20 H21 N5 O2' _chem_comp.formula_weight 363.413 _chem_comp.id X9O _chem_comp.mon_nstd_flag . _chem_comp.name ~{N}-(2-aminophenyl)-4-[2-(2-azanyl-5-methyl-4-oxidanyl-phenyl)hydrazinyl]benzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C16 C15 X9O sing 385 n n O1 C14 X9O sing 386 n n C15 C14 X9O doub 387 n y C15 C17 X9O sing 388 n y C14 C13 X9O sing 389 n y C17 C11 X9O doub 390 n y N2 N3 X9O sing 391 n n N2 C10 X9O sing 392 n n C9 C8 X9O doub 393 n y C9 C10 X9O sing 394 n y C13 C12 X9O doub 395 n y C11 C12 X9O sing 396 n y C11 N3 X9O sing 397 n n C12 N4 X9O sing 398 n n C8 C7 X9O sing 399 n y C10 C18 X9O doub 400 n y O C X9O doub 401 n n C7 C19 X9O doub 402 n y C7 C X9O sing 403 n n C18 C19 X9O sing 404 n y C N X9O sing 405 n n N C1 X9O sing 406 n n C2 C1 X9O doub 407 n y C2 C3 X9O sing 408 n y C1 C6 X9O sing 409 n y C3 C4 X9O doub 410 n y C6 N1 X9O sing 411 n n C6 C5 X9O doub 412 n y C4 C5 X9O sing 413 n y C2 H1 X9O sing 414 n n C3 H2 X9O sing 415 n n N4 H3 X9O sing 416 n n N4 H4 X9O sing 417 n n C5 H5 X9O sing 418 n n C8 H6 X9O sing 419 n n C9 H7 X9O sing 420 n n C16 H8 X9O sing 421 n n C16 H9 X9O sing 422 n n C16 H10 X9O sing 423 n n C19 H11 X9O sing 424 n n C18 H12 X9O sing 425 n n C17 H13 X9O sing 426 n n N H14 X9O sing 427 n n C13 H15 X9O sing 428 n n C4 H16 X9O sing 429 n n N1 H17 X9O sing 430 n n N1 H18 X9O sing 431 n n N2 H19 X9O sing 432 n n N3 H20 X9O sing 433 n n O1 H21 X9O sing 434 n n # _atom_sites.entry_id 8P9F _atom_sites.fract_transf_matrix[1][1] 0.023677 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01898 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017585 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 X9O A 1 201 201 X9O 161 . C 3 EDO A 1 202 301 EDO EDO . D 3 EDO A 1 203 401 EDO EDO . E 3 EDO A 1 204 501 EDO EDO . F 3 EDO A 1 205 601 EDO EDO . G 3 EDO A 1 206 701 EDO EDO . H 4 HOH A 1 301 57 HOH HOH . H 4 HOH A 2 302 86 HOH HOH . H 4 HOH A 3 303 88 HOH HOH . H 4 HOH A 4 304 60 HOH HOH . H 4 HOH A 5 305 130 HOH HOH . H 4 HOH A 6 306 92 HOH HOH . H 4 HOH A 7 307 84 HOH HOH . H 4 HOH A 8 308 193 HOH HOH . H 4 HOH A 9 309 113 HOH HOH . H 4 HOH A 10 310 4 HOH HOH . H 4 HOH A 11 311 154 HOH HOH . H 4 HOH A 12 312 91 HOH HOH . H 4 HOH A 13 313 27 HOH HOH . H 4 HOH A 14 314 44 HOH HOH . H 4 HOH A 15 315 29 HOH HOH . H 4 HOH A 16 316 112 HOH HOH . H 4 HOH A 17 317 11 HOH HOH . H 4 HOH A 18 318 68 HOH HOH . H 4 HOH A 19 319 123 HOH HOH . H 4 HOH A 20 320 178 HOH HOH . H 4 HOH A 21 321 54 HOH HOH . H 4 HOH A 22 322 83 HOH HOH . H 4 HOH A 23 323 82 HOH HOH . H 4 HOH A 24 324 125 HOH HOH . H 4 HOH A 25 325 47 HOH HOH . H 4 HOH A 26 326 93 HOH HOH . H 4 HOH A 27 327 5 HOH HOH . H 4 HOH A 28 328 33 HOH HOH . H 4 HOH A 29 329 50 HOH HOH . H 4 HOH A 30 330 156 HOH HOH . H 4 HOH A 31 331 21 HOH HOH . H 4 HOH A 32 332 122 HOH HOH . H 4 HOH A 33 333 31 HOH HOH . H 4 HOH A 34 334 2 HOH HOH . H 4 HOH A 35 335 115 HOH HOH . H 4 HOH A 36 336 40 HOH HOH . H 4 HOH A 37 337 15 HOH HOH . H 4 HOH A 38 338 58 HOH HOH . H 4 HOH A 39 339 24 HOH HOH . H 4 HOH A 40 340 95 HOH HOH . H 4 HOH A 41 341 107 HOH HOH . H 4 HOH A 42 342 205 HOH HOH . H 4 HOH A 43 343 45 HOH HOH . H 4 HOH A 44 344 66 HOH HOH . H 4 HOH A 45 345 139 HOH HOH . H 4 HOH A 46 346 81 HOH HOH . H 4 HOH A 47 347 103 HOH HOH . H 4 HOH A 48 348 6 HOH HOH . H 4 HOH A 49 349 79 HOH HOH . H 4 HOH A 50 350 7 HOH HOH . H 4 HOH A 51 351 132 HOH HOH . H 4 HOH A 52 352 19 HOH HOH . H 4 HOH A 53 353 36 HOH HOH . H 4 HOH A 54 354 138 HOH HOH . H 4 HOH A 55 355 121 HOH HOH . H 4 HOH A 56 356 56 HOH HOH . H 4 HOH A 57 357 3 HOH HOH . H 4 HOH A 58 358 136 HOH HOH . H 4 HOH A 59 359 87 HOH HOH . H 4 HOH A 60 360 48 HOH HOH . H 4 HOH A 61 361 200 HOH HOH . H 4 HOH A 62 362 14 HOH HOH . H 4 HOH A 63 363 213 HOH HOH . H 4 HOH A 64 364 73 HOH HOH . H 4 HOH A 65 365 76 HOH HOH . H 4 HOH A 66 366 212 HOH HOH . H 4 HOH A 67 367 10 HOH HOH . H 4 HOH A 68 368 133 HOH HOH . H 4 HOH A 69 369 34 HOH HOH . H 4 HOH A 70 370 26 HOH HOH . H 4 HOH A 71 371 70 HOH HOH . H 4 HOH A 72 372 114 HOH HOH . H 4 HOH A 73 373 55 HOH HOH . H 4 HOH A 74 374 117 HOH HOH . H 4 HOH A 75 375 211 HOH HOH . H 4 HOH A 76 376 37 HOH HOH . H 4 HOH A 77 377 41 HOH HOH . H 4 HOH A 78 378 151 HOH HOH . H 4 HOH A 79 379 110 HOH HOH . H 4 HOH A 80 380 9 HOH HOH . H 4 HOH A 81 381 25 HOH HOH . H 4 HOH A 82 382 169 HOH HOH . H 4 HOH A 83 383 157 HOH HOH . H 4 HOH A 84 384 119 HOH HOH . H 4 HOH A 85 385 75 HOH HOH . H 4 HOH A 86 386 149 HOH HOH . H 4 HOH A 87 387 52 HOH HOH . H 4 HOH A 88 388 145 HOH HOH . H 4 HOH A 89 389 89 HOH HOH . H 4 HOH A 90 390 184 HOH HOH . H 4 HOH A 91 391 194 HOH HOH . H 4 HOH A 92 392 116 HOH HOH . H 4 HOH A 93 393 146 HOH HOH . H 4 HOH A 94 394 199 HOH HOH . H 4 HOH A 95 395 98 HOH HOH . H 4 HOH A 96 396 196 HOH HOH . H 4 HOH A 97 397 162 HOH HOH . H 4 HOH A 98 398 183 HOH HOH . H 4 HOH A 99 399 141 HOH HOH . H 4 HOH A 100 400 131 HOH HOH . H 4 HOH A 101 401 187 HOH HOH . H 4 HOH A 102 402 148 HOH HOH . H 4 HOH A 103 403 129 HOH HOH . H 4 HOH A 104 404 153 HOH HOH . H 4 HOH A 105 405 207 HOH HOH . H 4 HOH A 106 406 32 HOH HOH . H 4 HOH A 107 407 23 HOH HOH . H 4 HOH A 108 408 180 HOH HOH . H 4 HOH A 109 409 94 HOH HOH . H 4 HOH A 110 410 38 HOH HOH . H 4 HOH A 111 411 99 HOH HOH . H 4 HOH A 112 412 159 HOH HOH . H 4 HOH A 113 413 209 HOH HOH . H 4 HOH A 114 414 147 HOH HOH . H 4 HOH A 115 415 143 HOH HOH . H 4 HOH A 116 416 140 HOH HOH . H 4 HOH A 117 417 177 HOH HOH . H 4 HOH A 118 418 97 HOH HOH . H 4 HOH A 119 419 67 HOH HOH . H 4 HOH A 120 420 170 HOH HOH . H 4 HOH A 121 421 176 HOH HOH . H 4 HOH A 122 422 150 HOH HOH . H 4 HOH A 123 423 168 HOH HOH . H 4 HOH A 124 424 167 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 X9O . A . B 2 -20.499 5.234 -2.871 0.48 21.9 ? C1 X9O 201 A 1 HETATM 2 C C1 X9O . B . B 2 -20.599 5.201 -2.998 0.53 27.51 ? C1 X9O 201 A 1 HETATM 3 C C2 X9O . A . B 2 -21.811 4.782 -3.027 0.48 21.89 ? C2 X9O 201 A 1 HETATM 4 C C2 X9O . B . B 2 -19.883 4.754 -1.886 0.53 26.95 ? C2 X9O 201 A 1 HETATM 5 C C3 X9O . A . B 2 -22.274 3.712 -2.275 0.48 22.28 ? C3 X9O 201 A 1 HETATM 6 C C3 X9O . B . B 2 -20.362 3.697 -1.127 0.53 27.55 ? C3 X9O 201 A 1 HETATM 7 N N4 X9O . A . B 2 -17.583 14.456 -5.984 0.48 20.36 ? N4 X9O 201 A 1 HETATM 8 N N4 X9O . B . B 2 -17.599 14.431 -5.967 0.53 25.14 ? N4 X9O 201 A 1 HETATM 9 C C5 X9O . A . B 2 -20.145 3.526 -1.205 0.48 22.66 ? C5 X9O 201 A 1 HETATM 10 C C5 X9O . B . B 2 -22.266 3.515 -2.561 0.53 28.06 ? C5 X9O 201 A 1 HETATM 11 C C6 X9O . A . B 2 -19.646 4.606 -1.946 0.48 22.02 ? C6 X9O 201 A 1 HETATM 12 C C6 X9O . B . B 2 -21.81 4.579 -3.35 0.53 27.96 ? C6 X9O 201 A 1 HETATM 13 C C7 X9O . A . B 2 -19.157 7.487 -5.603 0.48 18.98 ? C7 X9O 201 A 1 HETATM 14 C C7 X9O . B . B 2 -19.128 7.439 -5.676 0.53 25.2 ? C7 X9O 201 A 1 HETATM 15 C C8 X9O . A . B 2 -18.437 7.345 -6.786 0.48 17.88 ? C8 X9O 201 A 1 HETATM 16 C C8 X9O . B . B 2 -18.45 7.34 -6.887 0.53 24.27 ? C8 X9O 201 A 1 HETATM 17 C C11 X9O . A . B 2 -16.317 12.872 -7.297 0.48 18.19 ? C11 X9O 201 A 1 HETATM 18 C C11 X9O . B . B 2 -16.317 12.868 -7.289 0.53 24.18 ? C11 X9O 201 A 1 HETATM 19 C C10 X9O . A . B 2 -17.785 9.66 -6.717 0.48 17.97 ? C10 X9O 201 A 1 HETATM 20 C C10 X9O . B . B 2 -17.793 9.651 -6.757 0.53 24.19 ? C10 X9O 201 A 1 HETATM 21 C C9 X9O . A . B 2 -17.754 8.416 -7.333 0.48 17.5 ? C9 X9O 201 A 1 HETATM 22 C C9 X9O . B . B 2 -17.787 8.431 -7.42 0.53 23.74 ? C9 X9O 201 A 1 HETATM 23 C C12 X9O . A . B 2 -16.551 14.189 -6.854 0.48 18.29 ? C12 X9O 201 A 1 HETATM 24 C C12 X9O . B . B 2 -16.563 14.18 -6.837 0.53 23.76 ? C12 X9O 201 A 1 HETATM 25 C C15 X9O . A . B 2 -14.43 13.649 -8.626 0.48 16 ? C15 X9O 201 A 1 HETATM 26 C C15 X9O . B . B 2 -14.418 13.667 -8.588 0.53 22.67 ? C15 X9O 201 A 1 HETATM 27 C C16 X9O . A . B 2 -13.273 13.358 -9.547 0.48 15.34 ? C16 X9O 201 A 1 HETATM 28 C C16 X9O . B . B 2 -13.258 13.392 -9.511 0.53 22.58 ? C16 X9O 201 A 1 HETATM 29 C C19 X9O . A . B 2 -19.205 8.741 -5 0.48 18.91 ? C19 X9O 201 A 1 HETATM 30 C C19 X9O . B . B 2 -19.144 8.668 -5.022 0.53 24.81 ? C19 X9O 201 A 1 HETATM 31 C C18 X9O . A . B 2 -18.529 9.817 -5.552 0.48 18.61 ? C18 X9O 201 A 1 HETATM 32 C C18 X9O . B . B 2 -18.484 9.762 -5.556 0.53 24.53 ? C18 X9O 201 A 1 HETATM 33 C C17 X9O . A . B 2 -15.258 12.624 -8.174 0.48 17.48 ? C17 X9O 201 A 1 HETATM 34 C C17 X9O . B . B 2 -15.246 12.634 -8.155 0.53 23.73 ? C17 X9O 201 A 1 HETATM 35 N N X9O . A . B 2 -19.993 6.308 -3.654 0.48 20.91 ? N X9O 201 A 1 HETATM 36 N N X9O . B . B 2 -20.107 6.273 -3.79 0.53 26.89 ? N X9O 201 A 1 HETATM 37 C C X9O . A . B 2 -19.795 6.275 -4.996 0.48 19.76 ? C X9O 201 A 1 HETATM 38 C C X9O . B . B 2 -19.776 6.216 -5.105 0.53 26.16 ? C X9O 201 A 1 HETATM 39 O O X9O . A . B 2 -20.08 5.297 -5.686 0.48 20.2 ? O X9O 201 A 1 HETATM 40 O O X9O . B . B 2 -19.963 5.218 -5.797 0.53 26.38 ? O X9O 201 A 1 HETATM 41 C C13 X9O . A . B 2 -15.724 15.217 -7.307 0.48 18.04 ? C13 X9O 201 A 1 HETATM 42 C C13 X9O . B . B 2 -15.737 15.217 -7.272 0.53 23.66 ? C13 X9O 201 A 1 HETATM 43 C C14 X9O . A . B 2 -14.687 14.947 -8.18 0.48 16.4 ? C14 X9O 201 A 1 HETATM 44 C C14 X9O . B . B 2 -14.686 14.959 -8.132 0.53 22.64 ? C14 X9O 201 A 1 HETATM 45 C C4 X9O . A . B 2 -21.445 3.087 -1.371 0.48 22.6 ? C4 X9O 201 A 1 HETATM 46 C C4 X9O . B . B 2 -21.546 3.083 -1.461 0.53 27.94 ? C4 X9O 201 A 1 HETATM 47 N N1 X9O . A . B 2 -18.353 5.046 -1.761 0.48 22.73 ? N1 X9O 201 A 1 HETATM 48 N N1 X9O . B . B 2 -22.528 4.992 -4.449 0.53 28.36 ? N1 X9O 201 A 1 HETATM 49 N N2 X9O . A . B 2 -17.04 10.708 -7.346 0.48 18.05 ? N2 X9O 201 A 1 HETATM 50 N N2 X9O . B . B 2 -17.065 10.726 -7.369 0.53 24.66 ? N2 X9O 201 A 1 HETATM 51 N N3 X9O . A . B 2 -17.151 11.837 -6.79 0.48 17.91 ? N3 X9O 201 A 1 HETATM 52 N N3 X9O . B . B 2 -17.109 11.818 -6.747 0.53 24.42 ? N3 X9O 201 A 1 HETATM 53 O O1 X9O . A . B 2 -13.898 15.951 -8.633 0.48 16.63 ? O1 X9O 201 A 1 HETATM 54 O O1 X9O . B . B 2 -13.891 15.976 -8.547 0.53 22.31 ? O1 X9O 201 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 328 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 54 #