data_8P9F
#
_model_server_result.job_id            A81pubpz7Y5VXOKko6iwTQ 
_model_server_result.datetime_utc      '2024-11-12 20:51:32' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8p9f 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":206}' 
#
_entry.id    8P9F 
#
_exptl.entry_id    8P9F 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8P9F 
_cell.length_a            42.235 
_cell.length_b            52.686 
_cell.length_c            56.866 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8P9F 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    'P 2ac 2ab' 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 E N N 
? 3 F N N 
? 3 G N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     8P9F 
_atom_sites.fract_transf_matrix[1][1]    0.023677 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01898 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.017585 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 X9O A 1 201 201 X9O 161 . 
C 3 EDO A 1 202 301 EDO EDO . 
D 3 EDO A 1 203 401 EDO EDO . 
E 3 EDO A 1 204 501 EDO EDO . 
F 3 EDO A 1 205 601 EDO EDO . 
G 3 EDO A 1 206 701 EDO EDO . 
H 4 HOH A 1 301 57 HOH HOH . 
H 4 HOH A 2 302 86 HOH HOH . 
H 4 HOH A 3 303 88 HOH HOH . 
H 4 HOH A 4 304 60 HOH HOH . 
H 4 HOH A 5 305 130 HOH HOH . 
H 4 HOH A 6 306 92 HOH HOH . 
H 4 HOH A 7 307 84 HOH HOH . 
H 4 HOH A 8 308 193 HOH HOH . 
H 4 HOH A 9 309 113 HOH HOH . 
H 4 HOH A 10 310 4 HOH HOH . 
H 4 HOH A 11 311 154 HOH HOH . 
H 4 HOH A 12 312 91 HOH HOH . 
H 4 HOH A 13 313 27 HOH HOH . 
H 4 HOH A 14 314 44 HOH HOH . 
H 4 HOH A 15 315 29 HOH HOH . 
H 4 HOH A 16 316 112 HOH HOH . 
H 4 HOH A 17 317 11 HOH HOH . 
H 4 HOH A 18 318 68 HOH HOH . 
H 4 HOH A 19 319 123 HOH HOH . 
H 4 HOH A 20 320 178 HOH HOH . 
H 4 HOH A 21 321 54 HOH HOH . 
H 4 HOH A 22 322 83 HOH HOH . 
H 4 HOH A 23 323 82 HOH HOH . 
H 4 HOH A 24 324 125 HOH HOH . 
H 4 HOH A 25 325 47 HOH HOH . 
H 4 HOH A 26 326 93 HOH HOH . 
H 4 HOH A 27 327 5 HOH HOH . 
H 4 HOH A 28 328 33 HOH HOH . 
H 4 HOH A 29 329 50 HOH HOH . 
H 4 HOH A 30 330 156 HOH HOH . 
H 4 HOH A 31 331 21 HOH HOH . 
H 4 HOH A 32 332 122 HOH HOH . 
H 4 HOH A 33 333 31 HOH HOH . 
H 4 HOH A 34 334 2 HOH HOH . 
H 4 HOH A 35 335 115 HOH HOH . 
H 4 HOH A 36 336 40 HOH HOH . 
H 4 HOH A 37 337 15 HOH HOH . 
H 4 HOH A 38 338 58 HOH HOH . 
H 4 HOH A 39 339 24 HOH HOH . 
H 4 HOH A 40 340 95 HOH HOH . 
H 4 HOH A 41 341 107 HOH HOH . 
H 4 HOH A 42 342 205 HOH HOH . 
H 4 HOH A 43 343 45 HOH HOH . 
H 4 HOH A 44 344 66 HOH HOH . 
H 4 HOH A 45 345 139 HOH HOH . 
H 4 HOH A 46 346 81 HOH HOH . 
H 4 HOH A 47 347 103 HOH HOH . 
H 4 HOH A 48 348 6 HOH HOH . 
H 4 HOH A 49 349 79 HOH HOH . 
H 4 HOH A 50 350 7 HOH HOH . 
H 4 HOH A 51 351 132 HOH HOH . 
H 4 HOH A 52 352 19 HOH HOH . 
H 4 HOH A 53 353 36 HOH HOH . 
H 4 HOH A 54 354 138 HOH HOH . 
H 4 HOH A 55 355 121 HOH HOH . 
H 4 HOH A 56 356 56 HOH HOH . 
H 4 HOH A 57 357 3 HOH HOH . 
H 4 HOH A 58 358 136 HOH HOH . 
H 4 HOH A 59 359 87 HOH HOH . 
H 4 HOH A 60 360 48 HOH HOH . 
H 4 HOH A 61 361 200 HOH HOH . 
H 4 HOH A 62 362 14 HOH HOH . 
H 4 HOH A 63 363 213 HOH HOH . 
H 4 HOH A 64 364 73 HOH HOH . 
H 4 HOH A 65 365 76 HOH HOH . 
H 4 HOH A 66 366 212 HOH HOH . 
H 4 HOH A 67 367 10 HOH HOH . 
H 4 HOH A 68 368 133 HOH HOH . 
H 4 HOH A 69 369 34 HOH HOH . 
H 4 HOH A 70 370 26 HOH HOH . 
H 4 HOH A 71 371 70 HOH HOH . 
H 4 HOH A 72 372 114 HOH HOH . 
H 4 HOH A 73 373 55 HOH HOH . 
H 4 HOH A 74 374 117 HOH HOH . 
H 4 HOH A 75 375 211 HOH HOH . 
H 4 HOH A 76 376 37 HOH HOH . 
H 4 HOH A 77 377 41 HOH HOH . 
H 4 HOH A 78 378 151 HOH HOH . 
H 4 HOH A 79 379 110 HOH HOH . 
H 4 HOH A 80 380 9 HOH HOH . 
H 4 HOH A 81 381 25 HOH HOH . 
H 4 HOH A 82 382 169 HOH HOH . 
H 4 HOH A 83 383 157 HOH HOH . 
H 4 HOH A 84 384 119 HOH HOH . 
H 4 HOH A 85 385 75 HOH HOH . 
H 4 HOH A 86 386 149 HOH HOH . 
H 4 HOH A 87 387 52 HOH HOH . 
H 4 HOH A 88 388 145 HOH HOH . 
H 4 HOH A 89 389 89 HOH HOH . 
H 4 HOH A 90 390 184 HOH HOH . 
H 4 HOH A 91 391 194 HOH HOH . 
H 4 HOH A 92 392 116 HOH HOH . 
H 4 HOH A 93 393 146 HOH HOH . 
H 4 HOH A 94 394 199 HOH HOH . 
H 4 HOH A 95 395 98 HOH HOH . 
H 4 HOH A 96 396 196 HOH HOH . 
H 4 HOH A 97 397 162 HOH HOH . 
H 4 HOH A 98 398 183 HOH HOH . 
H 4 HOH A 99 399 141 HOH HOH . 
H 4 HOH A 100 400 131 HOH HOH . 
H 4 HOH A 101 401 187 HOH HOH . 
H 4 HOH A 102 402 148 HOH HOH . 
H 4 HOH A 103 403 129 HOH HOH . 
H 4 HOH A 104 404 153 HOH HOH . 
H 4 HOH A 105 405 207 HOH HOH . 
H 4 HOH A 106 406 32 HOH HOH . 
H 4 HOH A 107 407 23 HOH HOH . 
H 4 HOH A 108 408 180 HOH HOH . 
H 4 HOH A 109 409 94 HOH HOH . 
H 4 HOH A 110 410 38 HOH HOH . 
H 4 HOH A 111 411 99 HOH HOH . 
H 4 HOH A 112 412 159 HOH HOH . 
H 4 HOH A 113 413 209 HOH HOH . 
H 4 HOH A 114 414 147 HOH HOH . 
H 4 HOH A 115 415 143 HOH HOH . 
H 4 HOH A 116 416 140 HOH HOH . 
H 4 HOH A 117 417 177 HOH HOH . 
H 4 HOH A 118 418 97 HOH HOH . 
H 4 HOH A 119 419 67 HOH HOH . 
H 4 HOH A 120 420 170 HOH HOH . 
H 4 HOH A 121 421 176 HOH HOH . 
H 4 HOH A 122 422 150 HOH HOH . 
H 4 HOH A 123 423 168 HOH HOH . 
H 4 HOH A 124 424 167 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . G 3 0.193 -1.79 -23.107 1 32.24 ? C1 EDO 206 A 1 
HETATM 2 O O1 EDO . . . G 3 0.515 -0.57 -23.788 1 29.62 ? O1 EDO 206 A 1 
HETATM 3 C C2 EDO . . . G 3 -1.153 -2.331 -23.587 1 33.61 ? C2 EDO 206 A 1 
HETATM 4 O O2 EDO . . . G 3 -1.076 -2.838 -24.928 1 34.73 ? O2 EDO 206 A 1 
#
_model_server_stats.io_time_ms              55 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           287 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           4 
#