data_8P9G # _model_server_result.job_id TRfZecsmFqk8yQMnGX6oOg _model_server_result.datetime_utc '2024-10-19 03:39:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8p9g # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 8P9G # _exptl.entry_id 8P9G _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 385.419 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ~{N}-(2-aminophenyl)-4-[(~{E})-(6-methyl-7-oxidanyl-1~{H}-indol-4-yl)diazenyl]benzamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8P9G _cell.length_a 42.236 _cell.length_b 52.733 _cell.length_c 56.808 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8P9G _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C22 H19 N5 O2' _chem_comp.formula_weight 385.419 _chem_comp.id X9K _chem_comp.mon_nstd_flag . _chem_comp.name ~{N}-(2-aminophenyl)-4-[(~{E})-(6-methyl-7-oxidanyl-1~{H}-indol-4-yl)diazenyl]benzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C18 C17 X9K sing 385 n n C17 C19 X9K doub 386 n y C17 C16 X9K sing 387 n y O1 C16 X9K sing 388 n n C19 C11 X9K sing 389 n y C16 C15 X9K doub 390 n y C9 C8 X9K doub 391 n y C9 C10 X9K sing 392 n y N2 N3 X9K doub 393 n n N2 C10 X9K sing 394 n n C11 N3 X9K sing 395 n n C11 C12 X9K doub 396 n y C15 C12 X9K sing 397 n y C15 N4 X9K sing 398 n y C8 C7 X9K sing 399 n y C12 C13 X9K sing 400 n y C10 C20 X9K doub 401 n y N4 C14 X9K sing 402 n y O C X9K doub 403 n n C13 C14 X9K doub 404 n y C7 C X9K sing 405 n n C7 C21 X9K doub 406 n y C20 C21 X9K sing 407 n y C N X9K sing 408 n n N1 C6 X9K sing 409 n n N C1 X9K sing 410 n n C6 C1 X9K doub 411 n y C6 C5 X9K sing 412 n y C1 C2 X9K sing 413 n y C5 C4 X9K doub 414 n y C2 C3 X9K doub 415 n y C4 C3 X9K sing 416 n y O1 H1 X9K sing 417 n n C14 H2 X9K sing 418 n n C21 H3 X9K sing 419 n n C20 H4 X9K sing 420 n n C19 H5 X9K sing 421 n n C18 H6 X9K sing 422 n n C18 H7 X9K sing 423 n n C18 H8 X9K sing 424 n n C13 H9 X9K sing 425 n n N4 H10 X9K sing 426 n n C3 H11 X9K sing 427 n n N H12 X9K sing 428 n n C2 H13 X9K sing 429 n n N1 H14 X9K sing 430 n n N1 H15 X9K sing 431 n n C4 H16 X9K sing 432 n n C9 H17 X9K sing 433 n n C8 H18 X9K sing 434 n n C5 H19 X9K sing 435 n n # _atom_sites.entry_id 8P9G _atom_sites.fract_transf_matrix[1][1] 0.023676 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018963 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017603 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 X9K A 1 201 201 X9K 390 . C 3 EDO A 1 202 301 EDO EDO . D 3 EDO A 1 203 401 EDO EDO . E 3 EDO A 1 204 501 EDO EDO . F 4 HOH A 1 301 42 HOH HOH . F 4 HOH A 2 302 133 HOH HOH . F 4 HOH A 3 303 157 HOH HOH . F 4 HOH A 4 304 156 HOH HOH . F 4 HOH A 5 305 84 HOH HOH . F 4 HOH A 6 306 120 HOH HOH . F 4 HOH A 7 307 128 HOH HOH . F 4 HOH A 8 308 149 HOH HOH . F 4 HOH A 9 309 1 HOH HOH . F 4 HOH A 10 310 8 HOH HOH . F 4 HOH A 11 311 74 HOH HOH . F 4 HOH A 12 312 87 HOH HOH . F 4 HOH A 13 313 216 HOH HOH . F 4 HOH A 14 314 58 HOH HOH . F 4 HOH A 15 315 10 HOH HOH . F 4 HOH A 16 316 2 HOH HOH . F 4 HOH A 17 317 132 HOH HOH . F 4 HOH A 18 318 112 HOH HOH . F 4 HOH A 19 319 49 HOH HOH . F 4 HOH A 20 320 77 HOH HOH . F 4 HOH A 21 321 30 HOH HOH . F 4 HOH A 22 322 127 HOH HOH . F 4 HOH A 23 323 92 HOH HOH . F 4 HOH A 24 324 235 HOH HOH . F 4 HOH A 25 325 15 HOH HOH . F 4 HOH A 26 326 4 HOH HOH . F 4 HOH A 27 327 231 HOH HOH . F 4 HOH A 28 328 26 HOH HOH . F 4 HOH A 29 329 103 HOH HOH . F 4 HOH A 30 330 88 HOH HOH . F 4 HOH A 31 331 33 HOH HOH . F 4 HOH A 32 332 48 HOH HOH . F 4 HOH A 33 333 105 HOH HOH . F 4 HOH A 34 334 124 HOH HOH . F 4 HOH A 35 335 19 HOH HOH . F 4 HOH A 36 336 7 HOH HOH . F 4 HOH A 37 337 46 HOH HOH . F 4 HOH A 38 338 57 HOH HOH . F 4 HOH A 39 339 28 HOH HOH . F 4 HOH A 40 340 6 HOH HOH . F 4 HOH A 41 341 75 HOH HOH . F 4 HOH A 42 342 223 HOH HOH . F 4 HOH A 43 343 65 HOH HOH . F 4 HOH A 44 344 11 HOH HOH . F 4 HOH A 45 345 125 HOH HOH . F 4 HOH A 46 346 200 HOH HOH . F 4 HOH A 47 347 163 HOH HOH . F 4 HOH A 48 348 113 HOH HOH . F 4 HOH A 49 349 217 HOH HOH . F 4 HOH A 50 350 47 HOH HOH . F 4 HOH A 51 351 36 HOH HOH . F 4 HOH A 52 352 89 HOH HOH . F 4 HOH A 53 353 101 HOH HOH . F 4 HOH A 54 354 153 HOH HOH . F 4 HOH A 55 355 100 HOH HOH . F 4 HOH A 56 356 192 HOH HOH . F 4 HOH A 57 357 81 HOH HOH . F 4 HOH A 58 358 52 HOH HOH . F 4 HOH A 59 359 94 HOH HOH . F 4 HOH A 60 360 9 HOH HOH . F 4 HOH A 61 361 37 HOH HOH . F 4 HOH A 62 362 97 HOH HOH . F 4 HOH A 63 363 114 HOH HOH . F 4 HOH A 64 364 183 HOH HOH . F 4 HOH A 65 365 66 HOH HOH . F 4 HOH A 66 366 23 HOH HOH . F 4 HOH A 67 367 25 HOH HOH . F 4 HOH A 68 368 63 HOH HOH . F 4 HOH A 69 369 70 HOH HOH . F 4 HOH A 70 370 32 HOH HOH . F 4 HOH A 71 371 143 HOH HOH . F 4 HOH A 72 372 62 HOH HOH . F 4 HOH A 73 373 129 HOH HOH . F 4 HOH A 74 374 22 HOH HOH . F 4 HOH A 75 375 197 HOH HOH . F 4 HOH A 76 376 43 HOH HOH . F 4 HOH A 77 377 130 HOH HOH . F 4 HOH A 78 378 151 HOH HOH . F 4 HOH A 79 379 148 HOH HOH . F 4 HOH A 80 380 165 HOH HOH . F 4 HOH A 81 381 3 HOH HOH . F 4 HOH A 82 382 182 HOH HOH . F 4 HOH A 83 383 119 HOH HOH . F 4 HOH A 84 384 234 HOH HOH . F 4 HOH A 85 385 168 HOH HOH . F 4 HOH A 86 386 134 HOH HOH . F 4 HOH A 87 387 141 HOH HOH . F 4 HOH A 88 388 158 HOH HOH . F 4 HOH A 89 389 14 HOH HOH . F 4 HOH A 90 390 219 HOH HOH . F 4 HOH A 91 391 86 HOH HOH . F 4 HOH A 92 392 126 HOH HOH . F 4 HOH A 93 393 209 HOH HOH . F 4 HOH A 94 394 140 HOH HOH . F 4 HOH A 95 395 131 HOH HOH . F 4 HOH A 96 396 116 HOH HOH . F 4 HOH A 97 397 44 HOH HOH . F 4 HOH A 98 398 222 HOH HOH . F 4 HOH A 99 399 152 HOH HOH . F 4 HOH A 100 400 61 HOH HOH . F 4 HOH A 101 401 102 HOH HOH . F 4 HOH A 102 402 136 HOH HOH . F 4 HOH A 103 403 82 HOH HOH . F 4 HOH A 104 404 76 HOH HOH . F 4 HOH A 105 405 204 HOH HOH . F 4 HOH A 106 406 137 HOH HOH . F 4 HOH A 107 407 208 HOH HOH . F 4 HOH A 108 408 187 HOH HOH . F 4 HOH A 109 409 139 HOH HOH . F 4 HOH A 110 410 205 HOH HOH . F 4 HOH A 111 411 206 HOH HOH . F 4 HOH A 112 412 207 HOH HOH . F 4 HOH A 113 413 236 HOH HOH . F 4 HOH A 114 414 98 HOH HOH . F 4 HOH A 115 415 178 HOH HOH . F 4 HOH A 116 416 212 HOH HOH . F 4 HOH A 117 417 215 HOH HOH . F 4 HOH A 118 418 142 HOH HOH . F 4 HOH A 119 419 166 HOH HOH . F 4 HOH A 120 420 154 HOH HOH . F 4 HOH A 121 421 29 HOH HOH . F 4 HOH A 122 422 162 HOH HOH . F 4 HOH A 123 423 135 HOH HOH . F 4 HOH A 124 424 221 HOH HOH . F 4 HOH A 125 425 110 HOH HOH . F 4 HOH A 126 426 111 HOH HOH . F 4 HOH A 127 427 193 HOH HOH . F 4 HOH A 128 428 108 HOH HOH . F 4 HOH A 129 429 145 HOH HOH . F 4 HOH A 130 430 233 HOH HOH . F 4 HOH A 131 431 227 HOH HOH . F 4 HOH A 132 432 196 HOH HOH . F 4 HOH A 133 433 121 HOH HOH . F 4 HOH A 134 434 40 HOH HOH . F 4 HOH A 135 435 106 HOH HOH . F 4 HOH A 136 436 147 HOH HOH . F 4 HOH A 137 437 72 HOH HOH . F 4 HOH A 138 438 164 HOH HOH . F 4 HOH A 139 439 150 HOH HOH . F 4 HOH A 140 440 138 HOH HOH . F 4 HOH A 141 441 169 HOH HOH . F 4 HOH A 142 442 189 HOH HOH . F 4 HOH A 143 443 161 HOH HOH . F 4 HOH A 144 444 188 HOH HOH . F 4 HOH A 145 445 56 HOH HOH . F 4 HOH A 146 446 107 HOH HOH . F 4 HOH A 147 447 159 HOH HOH . F 4 HOH A 148 448 210 HOH HOH . F 4 HOH A 149 449 176 HOH HOH . F 4 HOH A 150 450 170 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 X9K . A . B 2 -14.048 16.016 -8.328 0.59 12.05 ? O1 X9K 201 A 1 HETATM 2 O O1 X9K . B . B 2 -14.016 15.963 -8.341 0.41 16.38 ? O1 X9K 201 A 1 HETATM 3 C C14 X9K . A . B 2 -17.222 15.904 -5.497 0.59 14.63 ? C14 X9K 201 A 1 HETATM 4 C C14 X9K . B . B 2 -17.249 15.958 -5.554 0.41 17.81 ? C14 X9K 201 A 1 HETATM 5 N N3 X9K . A . B 2 -17.221 11.748 -6.662 0.59 14.5 ? N3 X9K 201 A 1 HETATM 6 N N3 X9K . B . B 2 -17.127 11.717 -6.543 0.41 18.35 ? N3 X9K 201 A 1 HETATM 7 C C15 X9K . A . B 2 -15.799 15.117 -7.017 0.59 12.34 ? C15 X9K 201 A 1 HETATM 8 C C15 X9K . B . B 2 -15.804 15.12 -7.029 0.41 16.58 ? C15 X9K 201 A 1 HETATM 9 C C17 X9K . A . B 2 -14.538 13.688 -8.485 0.59 11.65 ? C17 X9K 201 A 1 HETATM 10 C C17 X9K . B . B 2 -14.541 13.645 -8.457 0.41 16.35 ? C17 X9K 201 A 1 HETATM 11 C C21 X9K . A . B 2 -19.285 8.578 -4.875 0.59 18.26 ? C21 X9K 201 A 1 HETATM 12 C C21 X9K . B . B 2 -19.243 8.596 -4.839 0.41 20.07 ? C21 X9K 201 A 1 HETATM 13 C C20 X9K . A . B 2 -18.632 9.68 -5.402 0.59 17.77 ? C20 X9K 201 A 1 HETATM 14 C C20 X9K . B . B 2 -18.591 9.691 -5.38 0.41 19.88 ? C20 X9K 201 A 1 HETATM 15 C C19 X9K . A . B 2 -15.338 12.622 -8.083 0.59 12.35 ? C19 X9K 201 A 1 HETATM 16 C C19 X9K . B . B 2 -15.36 12.598 -8.043 0.41 16.69 ? C19 X9K 201 A 1 HETATM 17 C C18 X9K . A . B 2 -13.398 13.483 -9.451 0.59 11.42 ? C18 X9K 201 A 1 HETATM 18 C C18 X9K . B . B 2 -13.402 13.407 -9.415 0.41 16.35 ? C18 X9K 201 A 1 HETATM 19 C C16 X9K . A . B 2 -14.792 14.95 -7.943 0.59 11.59 ? C16 X9K 201 A 1 HETATM 20 C C16 X9K . B . B 2 -14.784 14.919 -7.94 0.41 16.24 ? C16 X9K 201 A 1 HETATM 21 O O X9K . A . B 2 -19.944 5.084 -5.649 0.59 18.96 ? O X9K 201 A 1 HETATM 22 O O X9K . B . B 2 -20.229 5.223 -5.637 0.41 19.94 ? O X9K 201 A 1 HETATM 23 C C13 X9K . A . B 2 -17.516 14.585 -5.622 0.59 14.74 ? C13 X9K 201 A 1 HETATM 24 C C13 X9K . B . B 2 -17.555 14.639 -5.654 0.41 17.81 ? C13 X9K 201 A 1 HETATM 25 C C12 X9K . A . B 2 -16.61 14.052 -6.595 0.59 13.3 ? C12 X9K 201 A 1 HETATM 26 C C12 X9K . B . B 2 -16.636 14.073 -6.599 0.41 17.09 ? C12 X9K 201 A 1 HETATM 27 N N4 X9K . A . B 2 -16.19 16.242 -6.335 0.59 13.34 ? N4 X9K 201 A 1 HETATM 28 N N4 X9K . B . B 2 -16.195 16.264 -6.379 0.41 17.14 ? N4 X9K 201 A 1 HETATM 29 C C11 X9K . A . B 2 -16.369 12.786 -7.151 0.59 13.26 ? C11 X9K 201 A 1 HETATM 30 C C11 X9K . B . B 2 -16.4 12.794 -7.129 0.41 17.29 ? C11 X9K 201 A 1 HETATM 31 C C10 X9K . A . B 2 -17.912 9.571 -6.59 0.59 16.61 ? C10 X9K 201 A 1 HETATM 32 C C10 X9K . B . B 2 -17.887 9.572 -6.575 0.41 19.29 ? C10 X9K 201 A 1 HETATM 33 C C1 X9K . A . B 2 -20.66 5.029 -2.889 0.59 19.53 ? C1 X9K 201 A 1 HETATM 34 C C1 X9K . B . B 2 -20.481 5.019 -2.789 0.41 19.63 ? C1 X9K 201 A 1 HETATM 35 C C X9K . A . B 2 -19.843 6.096 -4.961 0.59 18.41 ? C X9K 201 A 1 HETATM 36 C C X9K . B . B 2 -19.869 6.142 -4.907 0.41 19.51 ? C X9K 201 A 1 HETATM 37 N N2 X9K . A . B 2 -17.143 10.622 -7.22 0.59 15.59 ? N2 X9K 201 A 1 HETATM 38 N N2 X9K . B . B 2 -17.159 10.647 -7.201 0.41 18.86 ? N2 X9K 201 A 1 HETATM 39 C C3 X9K . A . B 2 -20.401 3.509 -1.037 0.59 20.12 ? C3 X9K 201 A 1 HETATM 40 C C3 X9K . B . B 2 -22.204 3.422 -2.254 0.41 20.06 ? C3 X9K 201 A 1 HETATM 41 N N X9K . A . B 2 -20.195 6.133 -3.653 0.59 18.85 ? N X9K 201 A 1 HETATM 42 N N X9K . B . B 2 -19.986 6.104 -3.557 0.41 19.47 ? N X9K 201 A 1 HETATM 43 C C2 X9K . A . B 2 -19.952 4.599 -1.765 0.59 19.75 ? C2 X9K 201 A 1 HETATM 44 C C2 X9K . B . B 2 -21.762 4.504 -2.998 0.41 19.88 ? C2 X9K 201 A 1 HETATM 45 N N1 X9K . A . B 2 -22.544 4.758 -4.391 0.59 20.02 ? N1 X9K 201 A 1 HETATM 46 N N1 X9K . B . B 2 -18.378 4.951 -1.591 0.41 19.71 ? N1 X9K 201 A 1 HETATM 47 C C4 X9K . A . B 2 -21.546 2.842 -1.416 0.59 20.34 ? C4 X9K 201 A 1 HETATM 48 C C4 X9K . B . B 2 -21.386 2.849 -1.304 0.41 20.06 ? C4 X9K 201 A 1 HETATM 49 C C9 X9K . A . B 2 -17.88 8.349 -7.248 0.59 17.1 ? C9 X9K 201 A 1 HETATM 50 C C9 X9K . B . B 2 -17.858 8.343 -7.221 0.41 19.44 ? C9 X9K 201 A 1 HETATM 51 C C8 X9K . A . B 2 -18.533 7.251 -6.721 0.59 17.54 ? C8 X9K 201 A 1 HETATM 52 C C8 X9K . B . B 2 -18.512 7.251 -6.679 0.41 19.52 ? C8 X9K 201 A 1 HETATM 53 C C7 X9K . A . B 2 -19.233 7.345 -5.52 0.59 18.01 ? C7 X9K 201 A 1 HETATM 54 C C7 X9K . B . B 2 -19.208 7.36 -5.477 0.41 19.64 ? C7 X9K 201 A 1 HETATM 55 C C6 X9K . A . B 2 -21.831 4.356 -3.285 0.59 19.98 ? C6 X9K 201 A 1 HETATM 56 C C6 X9K . B . B 2 -19.641 4.447 -1.818 0.41 19.54 ? C6 X9K 201 A 1 HETATM 57 C C5 X9K . A . B 2 -22.256 3.258 -2.528 0.59 20.25 ? C5 X9K 201 A 1 HETATM 58 C C5 X9K . B . B 2 -20.117 3.355 -1.084 0.41 19.89 ? C5 X9K 201 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 58 #