data_8PB8
#
_model_server_result.job_id            '_Fby6pt6icOgBHp2QDjhmw' 
_model_server_result.datetime_utc      '2024-11-22 05:22:21' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8pb8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":402}' 
#
_entry.id    8PB8 
#
_exptl.entry_id    8PB8 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              282.331 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'HEXAETHYLENE GLYCOL' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8PB8 
_cell.length_a            62.2 
_cell.length_b            62.2 
_cell.length_c            154.83 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8PB8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        78 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 G N N 
#
_chem_comp.formula           'C12 H26 O7' 
_chem_comp.formula_weight    282.331 
_chem_comp.id                P6G 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'HEXAETHYLENE GLYCOL' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'POLYETHYLENE GLYCOL PEG400' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O1 C2 P6G sing 237 n n 
O1 H1 P6G sing 238 n n 
C2 C3 P6G sing 239 n n 
C2 H21 P6G sing 240 n n 
C2 H22 P6G sing 241 n n 
C3 O4 P6G sing 242 n n 
C3 H31 P6G sing 243 n n 
C3 H32 P6G sing 244 n n 
O4 C5 P6G sing 245 n n 
C5 C6 P6G sing 246 n n 
C5 H51 P6G sing 247 n n 
C5 H52 P6G sing 248 n n 
C6 O7 P6G sing 249 n n 
C6 H61 P6G sing 250 n n 
C6 H62 P6G sing 251 n n 
O7 C8 P6G sing 252 n n 
C8 C9 P6G sing 253 n n 
C8 H81 P6G sing 254 n n 
C8 H82 P6G sing 255 n n 
C9 O10 P6G sing 256 n n 
C9 H91 P6G sing 257 n n 
C9 H92 P6G sing 258 n n 
O10 C11 P6G sing 259 n n 
C11 C12 P6G sing 260 n n 
C11 H111 P6G sing 261 n n 
C11 H112 P6G sing 262 n n 
C12 O13 P6G sing 263 n n 
C12 H121 P6G sing 264 n n 
C12 H122 P6G sing 265 n n 
O13 C14 P6G sing 266 n n 
C14 C15 P6G sing 267 n n 
C14 H141 P6G sing 268 n n 
C14 H142 P6G sing 269 n n 
C15 O16 P6G sing 270 n n 
C15 H151 P6G sing 271 n n 
C15 H152 P6G sing 272 n n 
O16 C17 P6G sing 273 n n 
C17 C18 P6G sing 274 n n 
C17 H171 P6G sing 275 n n 
C17 H172 P6G sing 276 n n 
C18 O19 P6G sing 277 n n 
C18 H181 P6G sing 278 n n 
C18 H182 P6G sing 279 n n 
O19 H19 P6G sing 280 n n 
#
_atom_sites.entry_id                     8PB8 
_atom_sites.fract_transf_matrix[1][1]    0.016077 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016077 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006459 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 SAH A 1 401 401 SAH SAH . 
D 3 P6G A 1 402 501 P6G P6G . 
E 4 CL A 1 403 1 CL CL . 
F 2 SAH B 1 401 401 SAH SAH . 
G 3 P6G B 1 402 501 P6G P6G . 
H 5 HOH A 1 501 5 HOH HOH . 
H 5 HOH A 2 502 3 HOH HOH . 
H 5 HOH A 3 503 2 HOH HOH . 
H 5 HOH A 4 504 14 HOH HOH . 
H 5 HOH A 5 505 15 HOH HOH . 
H 5 HOH A 6 506 7 HOH HOH . 
H 5 HOH A 7 507 4 HOH HOH . 
H 5 HOH A 8 508 13 HOH HOH . 
H 5 HOH A 9 509 17 HOH HOH . 
H 5 HOH A 10 510 6 HOH HOH . 
H 5 HOH A 11 511 16 HOH HOH . 
I 5 HOH B 1 501 21 HOH HOH . 
I 5 HOH B 2 502 8 HOH HOH . 
I 5 HOH B 3 503 9 HOH HOH . 
I 5 HOH B 4 504 18 HOH HOH . 
I 5 HOH B 5 505 10 HOH HOH . 
I 5 HOH B 6 506 19 HOH HOH . 
I 5 HOH B 7 507 20 HOH HOH . 
I 5 HOH B 8 508 11 HOH HOH . 
I 5 HOH B 9 509 1 HOH HOH . 
I 5 HOH B 10 510 12 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O1 P6G . . . D 3 19.51 -5.999 11.561 1 63.66 ? O1 P6G 402 A 1 
HETATM 2 C C2 P6G . . . D 3 18.291 -5.327 11.835 1 70.52 ? C2 P6G 402 A 1 
HETATM 3 C C3 P6G . . . D 3 17.777 -4.61 10.624 1 65.32 ? C3 P6G 402 A 1 
HETATM 4 O O4 P6G . . . D 3 16.357 -4.648 10.607 1 68.23 ? O4 P6G 402 A 1 
HETATM 5 C C5 P6G . . . D 3 15.842 -5.405 9.521 1 62.84 ? C5 P6G 402 A 1 
HETATM 6 C C6 P6G . . . D 3 15.285 -6.701 10.01 1 65.33 ? C6 P6G 402 A 1 
HETATM 7 O O7 P6G . . . D 3 13.87 -6.611 10.129 1 62.48 ? O7 P6G 402 A 1 
HETATM 8 C C8 P6G . . . D 3 13.373 -7.235 11.304 1 63.74 ? C8 P6G 402 A 1 
HETATM 9 C C9 P6G . . . D 3 11.892 -7.422 11.211 1 67.97 ? C9 P6G 402 A 1 
HETATM 10 O O10 P6G . . . D 3 11.209 -6.173 11.161 1 64.78 ? O10 P6G 402 A 1 
HETATM 11 C C11 P6G . . . D 3 11.323 -5.426 12.365 1 62.2 ? C11 P6G 402 A 1 
HETATM 12 C C12 P6G . . . D 3 9.985 -5.273 13.01 1 61.6 ? C12 P6G 402 A 1 
HETATM 13 O O13 P6G . . . D 3 10.131 -5.187 14.422 1 59.64 ? O13 P6G 402 A 1 
HETATM 14 C C14 P6G . . . D 3 10.382 -6.445 15.036 1 54.35 ? C14 P6G 402 A 1 
HETATM 15 C C15 P6G . . . D 3 9.097 -7.146 15.331 1 62.51 ? C15 P6G 402 A 1 
HETATM 16 O O16 P6G . . . D 3 9.168 -8.495 14.89 1 64.78 ? O16 P6G 402 A 1 
HETATM 17 H H1 P6G . . . D 3 20.149 -5.779 12.079 1 76.39 ? H1 P6G 402 A 1 
HETATM 18 H H21 P6G . . . D 3 18.439 -4.683 12.544 1 84.62 ? H21 P6G 402 A 1 
HETATM 19 H H22 P6G . . . D 3 17.63 -5.977 12.121 1 84.62 ? H22 P6G 402 A 1 
HETATM 20 H H31 P6G . . . D 3 18.12 -5.04 9.826 1 78.39 ? H31 P6G 402 A 1 
HETATM 21 H H32 P6G . . . D 3 18.074 -3.687 10.647 1 78.39 ? H32 P6G 402 A 1 
HETATM 22 H H51 P6G . . . D 3 15.139 -4.899 9.084 1 75.41 ? H51 P6G 402 A 1 
HETATM 23 H H52 P6G . . . D 3 16.555 -5.582 8.888 1 75.41 ? H52 P6G 402 A 1 
HETATM 24 H H61 P6G . . . D 3 15.668 -6.908 10.877 1 78.39 ? H61 P6G 402 A 1 
HETATM 25 H H62 P6G . . . D 3 15.51 -7.404 9.382 1 78.39 ? H62 P6G 402 A 1 
HETATM 26 H H81 P6G . . . D 3 13.798 -8.101 11.409 1 76.48 ? H81 P6G 402 A 1 
HETATM 27 H H82 P6G . . . D 3 13.578 -6.679 12.072 1 76.48 ? H82 P6G 402 A 1 
HETATM 28 H H91 P6G . . . D 3 11.588 -7.917 11.988 1 81.56 ? H91 P6G 402 A 1 
HETATM 29 H H92 P6G . . . D 3 11.687 -7.925 10.408 1 81.56 ? H92 P6G 402 A 1 
HETATM 30 H H111 P6G . . . D 3 11.683 -4.548 12.163 1 74.63 ? H111 P6G 402 A 1 
HETATM 31 H H112 P6G . . . D 3 11.921 -5.888 12.973 1 74.63 ? H112 P6G 402 A 1 
HETATM 32 H H121 P6G . . . D 3 9.433 -6.041 12.79 1 73.92 ? H121 P6G 402 A 1 
HETATM 33 H H122 P6G . . . D 3 9.56 -4.466 12.681 1 73.92 ? H122 P6G 402 A 1 
HETATM 34 H H141 P6G . . . D 3 10.914 -6.992 14.438 1 65.21 ? H141 P6G 402 A 1 
HETATM 35 H H142 P6G . . . D 3 10.867 -6.305 15.864 1 65.21 ? H142 P6G 402 A 1 
HETATM 36 H H151 P6G . . . D 3 8.933 -7.129 16.287 1 75.02 ? H151 P6G 402 A 1 
HETATM 37 H H152 P6G . . . D 3 8.372 -6.696 14.87 1 75.02 ? H152 P6G 402 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           29 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           382 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           37 
#