data_8PC0 # _model_server_result.job_id P080Vxcxrgh8eItwmq6Ewg _model_server_result.datetime_utc '2024-11-14 04:35:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8pc0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1101}' # _entry.id 8PC0 # _exptl.entry_id 8PC0 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 39.098 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'POTASSIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _pdbx_entity_branch.entity_id 3 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 3 2 1 GAL ASO C1 O1 . O4 HO4 . sing 2 ? 3 3 2 SIA GAL C2 O2 . O6 HO6 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 3 n C ASO 1 B 1 ASO B 1 BGC 3 n C GAL 2 B 2 GAL B 2 GAL 3 n C SIA 3 B 3 SIA B 3 SIA # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 C O4 ASO . B ASO 1 1_555 C C1 GAL . B GAL 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.472 ? covale ? covale2 C O6 GAL . B GAL 2 1_555 C C2 SIA . B SIA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.426 ? metalc ? metalc1 A O THR 832 A THR 831 1_555 D K K . A K 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.828 ? metalc ? metalc2 A O ARG 835 A ARG 834 1_555 D K K . A K 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.762 ? metalc ? metalc3 A OD1 ASP 837 A ASP 836 1_555 D K K . A K 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.923 ? metalc ? metalc4 A OD2 ASP 837 A ASP 836 1_555 D K K . A K 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.935 ? metalc ? metalc5 A O GLY 840 A GLY 839 1_555 D K K . A K 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.912 ? metalc ? metalc6 D K K . A K 1101 1_555 F O HOH . A HOH 1238 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.828 ? metalc ? metalc7 D K K . A K 1101 1_555 F O HOH . A HOH 1262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.024 ? # _chem_comp.formula 'K 1' _chem_comp.formula_weight 39.098 _chem_comp.id K _chem_comp.mon_nstd_flag . _chem_comp.name 'POTASSIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8PC0 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 K A 1 1101 1001 K K . E 5 PO4 A 1 1102 1002 PO4 PO4 . F 6 HOH A 1 1201 1101 HOH HOH . F 6 HOH A 2 1202 1102 HOH HOH . F 6 HOH A 3 1203 1103 HOH HOH . F 6 HOH A 4 1204 1104 HOH HOH . F 6 HOH A 5 1205 1105 HOH HOH . F 6 HOH A 6 1206 1106 HOH HOH . F 6 HOH A 7 1207 1107 HOH HOH . F 6 HOH A 8 1208 1109 HOH HOH . F 6 HOH A 9 1209 1110 HOH HOH . F 6 HOH A 10 1210 1111 HOH HOH . F 6 HOH A 11 1211 1112 HOH HOH . F 6 HOH A 12 1212 1113 HOH HOH . F 6 HOH A 13 1213 1114 HOH HOH . F 6 HOH A 14 1214 1115 HOH HOH . F 6 HOH A 15 1215 1116 HOH HOH . F 6 HOH A 16 1216 1117 HOH HOH . F 6 HOH A 17 1217 1118 HOH HOH . F 6 HOH A 18 1218 1119 HOH HOH . F 6 HOH A 19 1219 1120 HOH HOH . F 6 HOH A 20 1220 1121 HOH HOH . F 6 HOH A 21 1221 1122 HOH HOH . F 6 HOH A 22 1222 1123 HOH HOH . F 6 HOH A 23 1223 1124 HOH HOH . F 6 HOH A 24 1224 1125 HOH HOH . F 6 HOH A 25 1225 1108 HOH HOH . F 6 HOH A 26 1226 1126 HOH HOH . F 6 HOH A 27 1227 1127 HOH HOH . F 6 HOH A 28 1228 1128 HOH HOH . F 6 HOH A 29 1229 1130 HOH HOH . F 6 HOH A 30 1230 1129 HOH HOH . F 6 HOH A 31 1231 1131 HOH HOH . F 6 HOH A 32 1232 1132 HOH HOH . F 6 HOH A 33 1233 1133 HOH HOH . F 6 HOH A 34 1234 1134 HOH HOH . F 6 HOH A 35 1235 1135 HOH HOH . F 6 HOH A 36 1236 1136 HOH HOH . F 6 HOH A 37 1237 1141 HOH HOH . F 6 HOH A 38 1238 1138 HOH HOH . F 6 HOH A 39 1239 1139 HOH HOH . F 6 HOH A 40 1240 1142 HOH HOH . F 6 HOH A 41 1241 1145 HOH HOH . F 6 HOH A 42 1242 1137 HOH HOH . F 6 HOH A 43 1243 1143 HOH HOH . F 6 HOH A 44 1244 1144 HOH HOH . F 6 HOH A 45 1245 1140 HOH HOH . F 6 HOH A 46 1246 1146 HOH HOH . F 6 HOH A 47 1247 1147 HOH HOH . F 6 HOH A 48 1248 1148 HOH HOH . F 6 HOH A 49 1249 1149 HOH HOH . F 6 HOH A 50 1250 1150 HOH HOH . F 6 HOH A 51 1251 1151 HOH HOH . F 6 HOH A 52 1252 1152 HOH HOH . F 6 HOH A 53 1253 1153 HOH HOH . F 6 HOH A 54 1254 1155 HOH HOH . F 6 HOH A 55 1255 1154 HOH HOH . F 6 HOH A 56 1256 1156 HOH HOH . F 6 HOH A 57 1257 1158 HOH HOH . F 6 HOH A 58 1258 1159 HOH HOH . F 6 HOH A 59 1259 1160 HOH HOH . F 6 HOH A 60 1260 1157 HOH HOH . F 6 HOH A 61 1261 1161 HOH HOH . F 6 HOH A 62 1262 1162 HOH HOH . F 6 HOH A 63 1263 1164 HOH HOH . F 6 HOH A 64 1264 1166 HOH HOH . F 6 HOH A 65 1265 1165 HOH HOH . F 6 HOH A 66 1266 1167 HOH HOH . F 6 HOH A 67 1267 1168 HOH HOH . F 6 HOH A 68 1268 1163 HOH HOH . F 6 HOH A 69 1269 1169 HOH HOH . F 6 HOH A 70 1270 1170 HOH HOH . F 6 HOH A 71 1271 1171 HOH HOH . F 6 HOH A 72 1272 1172 HOH HOH . F 6 HOH A 73 1273 1175 HOH HOH . F 6 HOH A 74 1274 1173 HOH HOH . F 6 HOH A 75 1275 1174 HOH HOH . F 6 HOH A 76 1276 1176 HOH HOH . F 6 HOH A 77 1277 1177 HOH HOH . F 6 HOH A 78 1278 1178 HOH HOH . F 6 HOH A 79 1279 1179 HOH HOH . F 6 HOH A 80 1280 1180 HOH HOH . F 6 HOH A 81 1281 1181 HOH HOH . F 6 HOH A 82 1282 1182 HOH HOH . F 6 HOH A 83 1283 1183 HOH HOH . F 6 HOH A 84 1284 1184 HOH HOH . F 6 HOH A 85 1285 1185 HOH HOH . F 6 HOH A 86 1286 1186 HOH HOH . F 6 HOH A 87 1287 1187 HOH HOH . F 6 HOH A 88 1288 1188 HOH HOH . F 6 HOH A 89 1289 1189 HOH HOH . F 6 HOH A 90 1290 1190 HOH HOH . F 6 HOH A 91 1291 1191 HOH HOH . F 6 HOH A 92 1292 1192 HOH HOH . F 6 HOH A 93 1293 1193 HOH HOH . F 6 HOH A 94 1294 1194 HOH HOH . F 6 HOH A 95 1295 1195 HOH HOH . F 6 HOH A 96 1296 1196 HOH HOH . F 6 HOH A 97 1297 1197 HOH HOH . F 6 HOH A 98 1298 1198 HOH HOH . F 6 HOH A 99 1299 1199 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol K _atom_site.label_atom_id K _atom_site.label_comp_id K _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x 196.21 _atom_site.Cartn_y 187.518 _atom_site.Cartn_z 157.16 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 50.58 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id K _atom_site.auth_comp_id K _atom_site.auth_seq_id 1101 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 47 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 33 _model_server_stats.query_time_ms 339 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #