data_8PC4
#
_model_server_result.job_id            oLIP4fr3F3KTXYVIvH7FLg 
_model_server_result.datetime_utc      '2024-11-14 04:03:02' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8pc4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":401}' 
#
_entry.id    8PC4 
#
_exptl.entry_id    8PC4 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            8PC4 
_cell.length_a            94.389 
_cell.length_b            94.389 
_cell.length_c            442.325 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8PC4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        179 
_symmetry.space_group_name_Hall    'P 65 2 (x,y,z+1/12)' 
_symmetry.space_group_name_H-M     'P 65 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 N N N 
? 2 O N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 185 A HIS 185 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.286 ? 
metalc ? metalc2 A ND1 HIS 187 A HIS 187 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? 
metalc ? metalc3 A OD2 ASP 189 A ASP 189 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? 
metalc ? metalc4 A NE2 HIS 190 A HIS 190 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.248 ? 
metalc ? metalc5 A NE2 HIS 253 A HIS 253 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? 
metalc ? metalc6 A OD2 ASP 284 A ASP 284 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? 
metalc ? metalc7 A OD2 ASP 284 A ASP 284 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? 
metalc ? metalc8 A NE2 HIS 343 A HIS 343 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.349 ? 
metalc ? metalc9 C ZN ZN . A ZN 401 1_555 E O12 3PE . A 3PE 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? 
metalc ? metalc10 D ZN ZN . A ZN 402 1_555 E O14 3PE . A 3PE 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.239 ? 
metalc ? metalc11 B NE2 HIS 185 B HIS 185 1_555 N ZN ZN . B ZN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.258 ? 
metalc ? metalc12 B ND1 HIS 187 B HIS 187 1_555 N ZN ZN . B ZN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? 
metalc ? metalc13 B OD2 ASP 189 B ASP 189 1_555 O ZN ZN . B ZN 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.158 ? 
metalc ? metalc14 B NE2 HIS 190 B HIS 190 1_555 O ZN ZN . B ZN 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.301 ? 
metalc ? metalc15 B NE2 HIS 253 B HIS 253 1_555 N ZN ZN . B ZN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? 
metalc ? metalc16 B OD2 ASP 284 B ASP 284 1_555 N ZN ZN . B ZN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.538 ? 
metalc ? metalc17 B OD2 ASP 284 B ASP 284 1_555 O ZN ZN . B ZN 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.1 ? 
metalc ? metalc18 B NE2 HIS 343 B HIS 343 1_555 O ZN ZN . B ZN 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? 
metalc ? metalc19 N ZN ZN . B ZN 603 1_555 P O12 3PE . B 3PE 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.972 ? 
metalc ? metalc20 O ZN ZN . B ZN 604 1_555 P O14 3PE . B 3PE 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.91 ? 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     8PC4 
_atom_sites.fract_transf_matrix[1][1]    0.010594 
_atom_sites.fract_transf_matrix[1][2]    0.006117 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012233 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.002261 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ZN A 1 401 401 ZN ZN . 
D 2 ZN A 1 402 402 ZN ZN . 
E 3 3PE A 1 403 503 3PE 3PE . 
F 4 DXC A 1 404 602 DXC DXC . 
G 4 DXC A 1 405 603 DXC DXC . 
H 4 DXC A 1 406 605 DXC DXC . 
I 4 DXC A 1 407 601 DXC DXC . 
J 4 DXC A 1 408 602 DXC DXC . 
K 4 DXC A 1 409 604 DXC DXC . 
L 4 DXC B 1 601 601 DXC DXC . 
M 4 DXC B 1 602 604 DXC DXC . 
N 2 ZN B 1 603 401 ZN ZN . 
O 2 ZN B 1 604 402 ZN ZN . 
P 3 3PE B 1 605 503 3PE 3PE . 
Q 4 DXC B 1 606 603 DXC DXC . 
R 4 DXC B 1 607 605 DXC DXC . 
S 5 HCZ B 1 608 100 HCZ HCZ . 
T 6 HOH A 1 501 19 HOH HOH . 
T 6 HOH A 2 502 27 HOH HOH . 
T 6 HOH A 3 503 4 HOH HOH . 
T 6 HOH A 4 504 31 HOH HOH . 
T 6 HOH A 5 505 26 HOH HOH . 
T 6 HOH A 6 506 15 HOH HOH . 
T 6 HOH A 7 507 35 HOH HOH . 
T 6 HOH A 8 508 22 HOH HOH . 
T 6 HOH A 9 509 11 HOH HOH . 
T 6 HOH A 10 510 38 HOH HOH . 
T 6 HOH A 11 511 9 HOH HOH . 
T 6 HOH A 12 512 20 HOH HOH . 
T 6 HOH A 13 513 30 HOH HOH . 
T 6 HOH A 14 514 14 HOH HOH . 
T 6 HOH A 15 515 29 HOH HOH . 
T 6 HOH A 16 516 10 HOH HOH . 
U 6 HOH B 1 701 2 HOH HOH . 
U 6 HOH B 2 702 36 HOH HOH . 
U 6 HOH B 3 703 8 HOH HOH . 
U 6 HOH B 4 704 3 HOH HOH . 
U 6 HOH B 5 705 16 HOH HOH . 
U 6 HOH B 6 706 5 HOH HOH . 
U 6 HOH B 7 707 23 HOH HOH . 
U 6 HOH B 8 708 18 HOH HOH . 
U 6 HOH B 9 709 37 HOH HOH . 
U 6 HOH B 10 710 6 HOH HOH . 
U 6 HOH B 11 711 28 HOH HOH . 
U 6 HOH B 12 712 7 HOH HOH . 
U 6 HOH B 13 713 24 HOH HOH . 
U 6 HOH B 14 714 13 HOH HOH . 
U 6 HOH B 15 715 34 HOH HOH . 
U 6 HOH B 16 716 17 HOH HOH . 
U 6 HOH B 17 717 25 HOH HOH . 
U 6 HOH B 18 718 33 HOH HOH . 
U 6 HOH B 19 719 12 HOH HOH . 
U 6 HOH B 20 720 1 HOH HOH . 
U 6 HOH B 21 721 32 HOH HOH . 
U 6 HOH B 22 722 21 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         C 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               11.225 
_atom_site.Cartn_y               23.833 
_atom_site.Cartn_z               202.248 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        85.54 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           401 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           19 
_model_server_stats.create_model_time_ms    16 
_model_server_stats.query_time_ms           221 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           1 
#