data_8PC7
#
_model_server_result.job_id            wCi9SZhZpOAlP_kx69-OFw 
_model_server_result.datetime_utc      '2025-01-17 15:15:33' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8pc7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"N","auth_seq_id":402}' 
#
_entry.id    8PC7 
#
_exptl.entry_id    8PC7 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              336.323 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'hexyl-[2-(3-oxidanylpyridin-2-yl)pyridin-3-yl]oxy-phosphinic acid' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          111.93 
_cell.angle_gamma         90 
_cell.entry_id            8PC7 
_cell.length_a            56.755 
_cell.length_b            189.39 
_cell.length_c            75.954 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8PC7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,F,O 1 1 
B,G,H,P 1 2 
C,I,J,K,L,Q 2 1 
D,M,N,R 2 3 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 1_455 x-1,y,z 1 0 0 0 1 0 0 0 1 -56.755 0 0 
3 'crystal symmetry operation' 1_655 x+1,y,z 1 0 0 0 1 0 0 0 1 56.755 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 H N N 
? 3 L N N 
? 3 N N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A OG SER 211 A SER 192 1_555 F P01 ZK8 . A ZK8 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.63 ? 
covale ? covale2 B OG SER 211 B SER 192 1_555 H P01 ZK8 . B ZK8 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.629 ? 
covale ? covale3 C OG SER 211 C SER 192 1_555 L P01 ZK8 . C ZK8 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.663 ? 
covale ? covale4 D OG SER 211 D SER 192 1_555 N P01 ZK8 . D ZK8 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.634 ? 
#
_chem_comp.formula           'C16 H21 N2 O4 P' 
_chem_comp.formula_weight    336.323 
_chem_comp.id                ZK8 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'hexyl-[2-(3-oxidanylpyridin-2-yl)pyridin-3-yl]oxy-phosphinic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C05 C06 ZK8 sing 405 n n 
C05 C04 ZK8 sing 406 n n 
O01 P01 ZK8 sing 407 n n 
C02 C01 ZK8 sing 408 n n 
C02 C03 ZK8 sing 409 n n 
C01 P01 ZK8 sing 410 n n 
C03 C04 ZK8 sing 411 n n 
O02 C14 ZK8 sing 412 n n 
P01 O03 ZK8 sing 413 n n 
C14 C15 ZK8 doub 414 n y 
C14 C13 ZK8 sing 415 n y 
O03 C07 ZK8 sing 416 n n 
C15 C16 ZK8 sing 417 n y 
C07 C12 ZK8 doub 418 n y 
C07 C08 ZK8 sing 419 n y 
C12 C11 ZK8 sing 420 n y 
C13 C08 ZK8 sing 421 n n 
C13 N02 ZK8 doub 422 n y 
C16 C17 ZK8 doub 423 n y 
C08 N01 ZK8 doub 424 n y 
C11 C10 ZK8 doub 425 n y 
N01 C10 ZK8 sing 426 n y 
N02 C17 ZK8 sing 427 n y 
C10 H1 ZK8 sing 428 n n 
C11 H2 ZK8 sing 429 n n 
C12 H3 ZK8 sing 430 n n 
C15 H4 ZK8 sing 431 n n 
C16 H5 ZK8 sing 432 n n 
C17 H6 ZK8 sing 433 n n 
C01 H7 ZK8 sing 434 n n 
C01 H8 ZK8 sing 435 n n 
O01 H9 ZK8 sing 436 n n 
C02 H10 ZK8 sing 437 n n 
C02 H11 ZK8 sing 438 n n 
O02 H12 ZK8 sing 439 n n 
C03 H13 ZK8 sing 440 n n 
C03 H14 ZK8 sing 441 n n 
C04 H15 ZK8 sing 442 n n 
C04 H16 ZK8 sing 443 n n 
C05 H17 ZK8 sing 444 n n 
C05 H18 ZK8 sing 445 n n 
C06 H19 ZK8 sing 446 n n 
C06 H20 ZK8 sing 447 n n 
C06 H21 ZK8 sing 448 n n 
P01 O1 ZK8 doub 449 n n 
#
_atom_sites.entry_id                     8PC7 
_atom_sites.fract_transf_matrix[1][1]    0.01762 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.007092 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00528 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014192 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 PEG A 1 401 401 PEG PEG . 
F 3 ZK8 A 1 402 192 ZK8 141 . 
G 2 PEG B 1 401 401 PEG PEG . 
H 3 ZK8 B 1 402 192 ZK8 141 . 
I 2 PEG C 1 401 401 PEG PEG . 
J 4 GOL C 1 402 501 GOL GOL . 
K 4 GOL C 1 403 601 GOL GOL . 
L 3 ZK8 C 1 404 192 ZK8 141 . 
M 4 GOL D 1 401 401 GOL GOL . 
N 3 ZK8 D 1 402 192 ZK8 141 . 
O 5 HOH A 1 501 1 HOH HOH . 
O 5 HOH A 2 502 11 HOH HOH . 
O 5 HOH A 3 503 78 HOH HOH . 
O 5 HOH A 4 504 47 HOH HOH . 
O 5 HOH A 5 505 41 HOH HOH . 
O 5 HOH A 6 506 82 HOH HOH . 
O 5 HOH A 7 507 38 HOH HOH . 
O 5 HOH A 8 508 31 HOH HOH . 
O 5 HOH A 9 509 9 HOH HOH . 
O 5 HOH A 10 510 21 HOH HOH . 
O 5 HOH A 11 511 3 HOH HOH . 
O 5 HOH A 12 512 7 HOH HOH . 
O 5 HOH A 13 513 15 HOH HOH . 
O 5 HOH A 14 514 2 HOH HOH . 
O 5 HOH A 15 515 5 HOH HOH . 
O 5 HOH A 16 516 35 HOH HOH . 
O 5 HOH A 17 517 46 HOH HOH . 
O 5 HOH A 18 518 30 HOH HOH . 
O 5 HOH A 19 519 37 HOH HOH . 
O 5 HOH A 20 520 34 HOH HOH . 
O 5 HOH A 21 521 12 HOH HOH . 
O 5 HOH A 22 522 77 HOH HOH . 
O 5 HOH A 23 523 43 HOH HOH . 
O 5 HOH A 24 524 121 HOH HOH . 
O 5 HOH A 25 525 76 HOH HOH . 
O 5 HOH A 26 526 42 HOH HOH . 
O 5 HOH A 27 527 20 HOH HOH . 
O 5 HOH A 28 528 40 HOH HOH . 
O 5 HOH A 29 529 32 HOH HOH . 
O 5 HOH A 30 530 124 HOH HOH . 
O 5 HOH A 31 531 80 HOH HOH . 
O 5 HOH A 32 532 33 HOH HOH . 
O 5 HOH A 33 533 45 HOH HOH . 
O 5 HOH A 34 534 29 HOH HOH . 
O 5 HOH A 35 535 25 HOH HOH . 
O 5 HOH A 36 536 22 HOH HOH . 
O 5 HOH A 37 537 102 HOH HOH . 
O 5 HOH A 38 538 81 HOH HOH . 
O 5 HOH A 39 539 79 HOH HOH . 
O 5 HOH A 40 540 83 HOH HOH . 
O 5 HOH A 41 541 36 HOH HOH . 
O 5 HOH A 42 542 39 HOH HOH . 
P 5 HOH B 1 501 84 HOH HOH . 
P 5 HOH B 2 502 89 HOH HOH . 
P 5 HOH B 3 503 8 HOH HOH . 
P 5 HOH B 4 504 44 HOH HOH . 
P 5 HOH B 5 505 86 HOH HOH . 
P 5 HOH B 6 506 13 HOH HOH . 
P 5 HOH B 7 507 51 HOH HOH . 
P 5 HOH B 8 508 48 HOH HOH . 
P 5 HOH B 9 509 4 HOH HOH . 
P 5 HOH B 10 510 88 HOH HOH . 
P 5 HOH B 11 511 52 HOH HOH . 
P 5 HOH B 12 512 28 HOH HOH . 
P 5 HOH B 13 513 6 HOH HOH . 
P 5 HOH B 14 514 50 HOH HOH . 
P 5 HOH B 15 515 10 HOH HOH . 
P 5 HOH B 16 516 23 HOH HOH . 
P 5 HOH B 17 517 19 HOH HOH . 
P 5 HOH B 18 518 74 HOH HOH . 
P 5 HOH B 19 519 14 HOH HOH . 
P 5 HOH B 20 520 103 HOH HOH . 
P 5 HOH B 21 521 75 HOH HOH . 
P 5 HOH B 22 522 104 HOH HOH . 
P 5 HOH B 23 523 24 HOH HOH . 
P 5 HOH B 24 524 49 HOH HOH . 
P 5 HOH B 25 525 105 HOH HOH . 
P 5 HOH B 26 526 27 HOH HOH . 
P 5 HOH B 27 527 26 HOH HOH . 
P 5 HOH B 28 528 85 HOH HOH . 
P 5 HOH B 29 529 90 HOH HOH . 
P 5 HOH B 30 530 18 HOH HOH . 
Q 5 HOH C 1 501 94 HOH HOH . 
Q 5 HOH C 2 502 17 HOH HOH . 
Q 5 HOH C 3 503 55 HOH HOH . 
Q 5 HOH C 4 504 53 HOH HOH . 
Q 5 HOH C 5 505 59 HOH HOH . 
Q 5 HOH C 6 506 60 HOH HOH . 
Q 5 HOH C 7 507 72 HOH HOH . 
Q 5 HOH C 8 508 63 HOH HOH . 
Q 5 HOH C 9 509 111 HOH HOH . 
Q 5 HOH C 10 510 87 HOH HOH . 
Q 5 HOH C 11 511 58 HOH HOH . 
Q 5 HOH C 12 512 107 HOH HOH . 
Q 5 HOH C 13 513 97 HOH HOH . 
Q 5 HOH C 14 514 73 HOH HOH . 
Q 5 HOH C 15 515 56 HOH HOH . 
Q 5 HOH C 16 516 95 HOH HOH . 
Q 5 HOH C 17 517 93 HOH HOH . 
Q 5 HOH C 18 518 62 HOH HOH . 
Q 5 HOH C 19 519 110 HOH HOH . 
Q 5 HOH C 20 520 106 HOH HOH . 
Q 5 HOH C 21 521 57 HOH HOH . 
Q 5 HOH C 22 522 109 HOH HOH . 
Q 5 HOH C 23 523 64 HOH HOH . 
Q 5 HOH C 24 524 54 HOH HOH . 
Q 5 HOH C 25 525 108 HOH HOH . 
Q 5 HOH C 26 526 96 HOH HOH . 
R 5 HOH D 1 501 101 HOH HOH . 
R 5 HOH D 2 502 68 HOH HOH . 
R 5 HOH D 3 503 16 HOH HOH . 
R 5 HOH D 4 504 118 HOH HOH . 
R 5 HOH D 5 505 100 HOH HOH . 
R 5 HOH D 6 506 70 HOH HOH . 
R 5 HOH D 7 507 114 HOH HOH . 
R 5 HOH D 8 508 67 HOH HOH . 
R 5 HOH D 9 509 69 HOH HOH . 
R 5 HOH D 10 510 113 HOH HOH . 
R 5 HOH D 11 511 119 HOH HOH . 
R 5 HOH D 12 512 98 HOH HOH . 
R 5 HOH D 13 513 117 HOH HOH . 
R 5 HOH D 14 514 65 HOH HOH . 
R 5 HOH D 15 515 71 HOH HOH . 
R 5 HOH D 16 516 115 HOH HOH . 
R 5 HOH D 17 517 66 HOH HOH . 
R 5 HOH D 18 518 112 HOH HOH . 
R 5 HOH D 19 519 123 HOH HOH . 
R 5 HOH D 20 520 122 HOH HOH . 
R 5 HOH D 21 521 116 HOH HOH . 
R 5 HOH D 22 522 99 HOH HOH . 
R 5 HOH D 23 523 61 HOH HOH . 
R 5 HOH D 24 524 91 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C10 ZK8 . . . N 3 -63.456 -43.272 83.63 1 57.04 ? C10 ZK8 402 D 1 
HETATM 2 C C11 ZK8 . . . N 3 -62.338 -43.362 84.387 1 54.72 ? C11 ZK8 402 D 1 
HETATM 3 C C12 ZK8 . . . N 3 -61.983 -42.289 85.19 1 54.59 ? C12 ZK8 402 D 1 
HETATM 4 C C13 ZK8 . . . N 3 -65.043 -39.98 84.271 1 60.69 ? C13 ZK8 402 D 1 
HETATM 5 C C14 ZK8 . . . N 3 -65.536 -39.192 85.38 1 63.48 ? C14 ZK8 402 D 1 
HETATM 6 C C15 ZK8 . . . N 3 -66.477 -38.146 85.136 1 63.11 ? C15 ZK8 402 D 1 
HETATM 7 C C16 ZK8 . . . N 3 -66.895 -37.924 83.84 1 62.17 ? C16 ZK8 402 D 1 
HETATM 8 C C17 ZK8 . . . N 3 -66.4 -38.69 82.859 1 59.97 ? C17 ZK8 402 D 1 
HETATM 9 P P01 ZK8 . . . N 3 -61.488 -40.008 87.367 1 42.24 ? P01 ZK8 402 D 1 
HETATM 10 C C01 ZK8 . . . N 3 -61.355 -38.282 88.003 1 43.69 ? C01 ZK8 402 D 1 
HETATM 11 C C07 ZK8 . . . N 3 -62.828 -41.132 85.236 1 53.24 ? C07 ZK8 402 D 1 
HETATM 12 N N01 ZK8 . . . N 3 -64.21 -42.216 83.664 1 58.48 ? N01 ZK8 402 D 1 
HETATM 13 C C02 ZK8 . . . N 3 -62.508 -37.403 87.513 1 45.77 ? C02 ZK8 402 D 1 
HETATM 14 C C08 ZK8 . . . N 3 -64.015 -41.123 84.389 1 56.77 ? C08 ZK8 402 D 1 
HETATM 15 N N02 ZK8 . . . N 3 -65.544 -39.625 83.09 1 61.16 ? N02 ZK8 402 D 1 
HETATM 16 O O02 ZK8 . . . N 3 -65.099 -39.459 86.686 1 65.22 ? O02 ZK8 402 D 1 
HETATM 17 C C03 ZK8 . . . N 3 -63.269 -36.737 88.665 1 47.18 ? C03 ZK8 402 D 1 
HETATM 18 O O03 ZK8 . . . N 3 -62.493 -40.022 86.054 1 49.02 ? O03 ZK8 402 D 1 
HETATM 19 C C04 ZK8 . . . N 3 -64.557 -37.459 89.024 1 47.37 ? C04 ZK8 402 D 1 
HETATM 20 C C05 ZK8 . . . N 3 -65.674 -36.483 89.343 1 47.6 ? C05 ZK8 402 D 1 
HETATM 21 C C06 ZK8 . . . N 3 -66.884 -37.304 89.776 1 48.25 ? C06 ZK8 402 D 1 
HETATM 22 O O1 ZK8 . . . N 3 -61.963 -40.933 88.405 1 45.24 ? O1 ZK8 402 D 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           17 
_model_server_stats.create_model_time_ms    25 
_model_server_stats.query_time_ms           236 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           22 
#