data_8PCB # _model_server_result.job_id 5L8QoYrcQCv1K6UhQgO9PA _model_server_result.datetime_utc '2024-11-23 23:07:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8pcb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 8PCB # _exptl.entry_id 8PCB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.84 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'BORATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8PCB _cell.length_a 41.84 _cell.length_b 41.84 _cell.length_c 233.28 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8PCB _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall 'P 32 2"' _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id OG _struct_conn.ptnr1_label_comp_id SER _struct_conn.ptnr1_label_seq_id 45 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id SER _struct_conn.ptnr1_auth_seq_id 70 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id B _struct_conn.ptnr2_label_comp_id BO4 _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id BO4 _struct_conn.ptnr2_auth_seq_id 301 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id B _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.423 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'B H4 O4 -1' _chem_comp.formula_weight 78.84 _chem_comp.id BO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'BORATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag B O1 BO4 sing 70 n n B O2 BO4 sing 71 n n B O3 BO4 sing 72 n n B O4 BO4 sing 73 n n O1 HO1 BO4 sing 74 n n O2 HO2 BO4 sing 75 n n O3 HO3 BO4 sing 76 n n O4 HO4 BO4 sing 77 n n # _atom_sites.entry_id 8PCB _atom_sites.fract_transf_matrix[1][1] 0.023901 _atom_sites.fract_transf_matrix[1][2] 0.013799 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.027598 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004287 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BO4 A 1 301 302 BO4 BAB . C 3 SO4 A 1 302 1 SO4 SO4 . D 4 HOH A 1 401 44 HOH HOH . D 4 HOH A 2 402 363 HOH HOH . D 4 HOH A 3 403 337 HOH HOH . D 4 HOH A 4 404 175 HOH HOH . D 4 HOH A 5 405 361 HOH HOH . D 4 HOH A 6 406 153 HOH HOH . D 4 HOH A 7 407 351 HOH HOH . D 4 HOH A 8 408 69 HOH HOH . D 4 HOH A 9 409 118 HOH HOH . D 4 HOH A 10 410 328 HOH HOH . D 4 HOH A 11 411 353 HOH HOH . D 4 HOH A 12 412 10 HOH HOH . D 4 HOH A 13 413 50 HOH HOH . D 4 HOH A 14 414 57 HOH HOH . D 4 HOH A 15 415 238 HOH HOH . D 4 HOH A 16 416 318 HOH HOH . D 4 HOH A 17 417 181 HOH HOH . D 4 HOH A 18 418 208 HOH HOH . D 4 HOH A 19 419 214 HOH HOH . D 4 HOH A 20 420 65 HOH HOH . D 4 HOH A 21 421 48 HOH HOH . D 4 HOH A 22 422 92 HOH HOH . D 4 HOH A 23 423 303 HOH HOH . D 4 HOH A 24 424 338 HOH HOH . D 4 HOH A 25 425 309 HOH HOH . D 4 HOH A 26 426 252 HOH HOH . D 4 HOH A 27 427 224 HOH HOH . D 4 HOH A 28 428 251 HOH HOH . D 4 HOH A 29 429 174 HOH HOH . D 4 HOH A 30 430 80 HOH HOH . D 4 HOH A 31 431 53 HOH HOH . D 4 HOH A 32 432 207 HOH HOH . D 4 HOH A 33 433 148 HOH HOH . D 4 HOH A 34 434 16 HOH HOH . D 4 HOH A 35 435 241 HOH HOH . D 4 HOH A 36 436 179 HOH HOH . D 4 HOH A 37 437 28 HOH HOH . D 4 HOH A 38 438 110 HOH HOH . D 4 HOH A 39 439 22 HOH HOH . D 4 HOH A 40 440 18 HOH HOH . D 4 HOH A 41 441 7 HOH HOH . D 4 HOH A 42 442 36 HOH HOH . D 4 HOH A 43 443 178 HOH HOH . D 4 HOH A 44 444 35 HOH HOH . D 4 HOH A 45 445 30 HOH HOH . D 4 HOH A 46 446 340 HOH HOH . D 4 HOH A 47 447 46 HOH HOH . D 4 HOH A 48 448 191 HOH HOH . D 4 HOH A 49 449 45 HOH HOH . D 4 HOH A 50 450 21 HOH HOH . D 4 HOH A 51 451 95 HOH HOH . D 4 HOH A 52 452 198 HOH HOH . D 4 HOH A 53 453 159 HOH HOH . D 4 HOH A 54 454 82 HOH HOH . D 4 HOH A 55 455 9 HOH HOH . D 4 HOH A 56 456 63 HOH HOH . D 4 HOH A 57 457 5 HOH HOH . D 4 HOH A 58 458 2 HOH HOH . D 4 HOH A 59 459 32 HOH HOH . D 4 HOH A 60 460 220 HOH HOH . D 4 HOH A 61 461 8 HOH HOH . D 4 HOH A 62 462 232 HOH HOH . D 4 HOH A 63 463 70 HOH HOH . D 4 HOH A 64 464 216 HOH HOH . D 4 HOH A 65 465 51 HOH HOH . D 4 HOH A 66 466 3 HOH HOH . D 4 HOH A 67 467 94 HOH HOH . D 4 HOH A 68 468 71 HOH HOH . D 4 HOH A 69 469 76 HOH HOH . D 4 HOH A 70 470 25 HOH HOH . D 4 HOH A 71 471 278 HOH HOH . D 4 HOH A 72 472 13 HOH HOH . D 4 HOH A 73 473 93 HOH HOH . D 4 HOH A 74 474 1 HOH HOH . D 4 HOH A 75 475 4 HOH HOH . D 4 HOH A 76 476 83 HOH HOH . D 4 HOH A 77 477 213 HOH HOH . D 4 HOH A 78 478 12 HOH HOH . D 4 HOH A 79 479 38 HOH HOH . D 4 HOH A 80 480 274 HOH HOH . D 4 HOH A 81 481 310 HOH HOH . D 4 HOH A 82 482 11 HOH HOH . D 4 HOH A 83 483 344 HOH HOH . D 4 HOH A 84 484 176 HOH HOH . D 4 HOH A 85 485 147 HOH HOH . D 4 HOH A 86 486 72 HOH HOH . D 4 HOH A 87 487 15 HOH HOH . D 4 HOH A 88 488 283 HOH HOH . D 4 HOH A 89 489 206 HOH HOH . D 4 HOH A 90 490 29 HOH HOH . D 4 HOH A 91 491 6 HOH HOH . D 4 HOH A 92 492 60 HOH HOH . D 4 HOH A 93 493 33 HOH HOH . D 4 HOH A 94 494 26 HOH HOH . D 4 HOH A 95 495 182 HOH HOH . D 4 HOH A 96 496 185 HOH HOH . D 4 HOH A 97 497 261 HOH HOH . D 4 HOH A 98 498 41 HOH HOH . D 4 HOH A 99 499 164 HOH HOH . D 4 HOH A 100 500 347 HOH HOH . D 4 HOH A 101 501 258 HOH HOH . D 4 HOH A 102 502 79 HOH HOH . D 4 HOH A 103 503 183 HOH HOH . D 4 HOH A 104 504 24 HOH HOH . D 4 HOH A 105 505 87 HOH HOH . D 4 HOH A 106 506 276 HOH HOH . D 4 HOH A 107 507 67 HOH HOH . D 4 HOH A 108 508 34 HOH HOH . D 4 HOH A 109 509 27 HOH HOH . D 4 HOH A 110 510 122 HOH HOH . D 4 HOH A 111 511 58 HOH HOH . D 4 HOH A 112 512 173 HOH HOH . D 4 HOH A 113 513 154 HOH HOH . D 4 HOH A 114 514 289 HOH HOH . D 4 HOH A 115 515 84 HOH HOH . D 4 HOH A 116 516 177 HOH HOH . D 4 HOH A 117 517 226 HOH HOH . D 4 HOH A 118 518 194 HOH HOH . D 4 HOH A 119 519 39 HOH HOH . D 4 HOH A 120 520 55 HOH HOH . D 4 HOH A 121 521 81 HOH HOH . D 4 HOH A 122 522 280 HOH HOH . D 4 HOH A 123 523 47 HOH HOH . D 4 HOH A 124 524 74 HOH HOH . D 4 HOH A 125 525 56 HOH HOH . D 4 HOH A 126 526 165 HOH HOH . D 4 HOH A 127 527 99 HOH HOH . D 4 HOH A 128 528 273 HOH HOH . D 4 HOH A 129 529 255 HOH HOH . D 4 HOH A 130 530 17 HOH HOH . D 4 HOH A 131 531 180 HOH HOH . D 4 HOH A 132 532 61 HOH HOH . D 4 HOH A 133 533 186 HOH HOH . D 4 HOH A 134 534 253 HOH HOH . D 4 HOH A 135 535 23 HOH HOH . D 4 HOH A 136 536 242 HOH HOH . D 4 HOH A 137 537 272 HOH HOH . D 4 HOH A 138 538 259 HOH HOH . D 4 HOH A 139 539 42 HOH HOH . D 4 HOH A 140 540 247 HOH HOH . D 4 HOH A 141 541 266 HOH HOH . D 4 HOH A 142 542 85 HOH HOH . D 4 HOH A 143 543 327 HOH HOH . D 4 HOH A 144 544 156 HOH HOH . D 4 HOH A 145 545 233 HOH HOH . D 4 HOH A 146 546 64 HOH HOH . D 4 HOH A 147 547 54 HOH HOH . D 4 HOH A 148 548 19 HOH HOH . D 4 HOH A 149 549 260 HOH HOH . D 4 HOH A 150 550 336 HOH HOH . D 4 HOH A 151 551 37 HOH HOH . D 4 HOH A 152 552 257 HOH HOH . D 4 HOH A 153 553 201 HOH HOH . D 4 HOH A 154 554 203 HOH HOH . D 4 HOH A 155 555 14 HOH HOH . D 4 HOH A 156 556 151 HOH HOH . D 4 HOH A 157 557 187 HOH HOH . D 4 HOH A 158 558 330 HOH HOH . D 4 HOH A 159 559 31 HOH HOH . D 4 HOH A 160 560 20 HOH HOH . D 4 HOH A 161 561 133 HOH HOH . D 4 HOH A 162 562 184 HOH HOH . D 4 HOH A 163 563 123 HOH HOH . D 4 HOH A 164 564 196 HOH HOH . D 4 HOH A 165 565 264 HOH HOH . D 4 HOH A 166 566 135 HOH HOH . D 4 HOH A 167 567 296 HOH HOH . D 4 HOH A 168 568 40 HOH HOH . D 4 HOH A 169 569 117 HOH HOH . D 4 HOH A 170 570 234 HOH HOH . D 4 HOH A 171 571 113 HOH HOH . D 4 HOH A 172 572 350 HOH HOH . D 4 HOH A 173 573 199 HOH HOH . D 4 HOH A 174 574 317 HOH HOH . D 4 HOH A 175 575 288 HOH HOH . D 4 HOH A 176 576 352 HOH HOH . D 4 HOH A 177 577 149 HOH HOH . D 4 HOH A 178 578 262 HOH HOH . D 4 HOH A 179 579 275 HOH HOH . D 4 HOH A 180 580 228 HOH HOH . D 4 HOH A 181 581 315 HOH HOH . D 4 HOH A 182 582 279 HOH HOH . D 4 HOH A 183 583 287 HOH HOH . D 4 HOH A 184 584 155 HOH HOH . D 4 HOH A 185 585 265 HOH HOH . D 4 HOH A 186 586 256 HOH HOH . D 4 HOH A 187 587 341 HOH HOH . D 4 HOH A 188 588 305 HOH HOH . D 4 HOH A 189 589 246 HOH HOH . D 4 HOH A 190 590 190 HOH HOH . D 4 HOH A 191 591 114 HOH HOH . D 4 HOH A 192 592 200 HOH HOH . D 4 HOH A 193 593 229 HOH HOH . D 4 HOH A 194 594 227 HOH HOH . D 4 HOH A 195 595 197 HOH HOH . D 4 HOH A 196 596 211 HOH HOH . D 4 HOH A 197 597 335 HOH HOH . D 4 HOH A 198 598 311 HOH HOH . D 4 HOH A 199 599 205 HOH HOH . D 4 HOH A 200 600 105 HOH HOH . D 4 HOH A 201 601 326 HOH HOH . D 4 HOH A 202 602 204 HOH HOH . D 4 HOH A 203 603 225 HOH HOH . D 4 HOH A 204 604 293 HOH HOH . D 4 HOH A 205 605 218 HOH HOH . D 4 HOH A 206 606 109 HOH HOH . D 4 HOH A 207 607 254 HOH HOH . D 4 HOH A 208 608 221 HOH HOH . D 4 HOH A 209 609 49 HOH HOH . D 4 HOH A 210 610 73 HOH HOH . D 4 HOH A 211 611 160 HOH HOH . D 4 HOH A 212 612 193 HOH HOH . D 4 HOH A 213 613 334 HOH HOH . D 4 HOH A 214 614 215 HOH HOH . D 4 HOH A 215 615 239 HOH HOH . D 4 HOH A 216 616 301 HOH HOH . D 4 HOH A 217 617 104 HOH HOH . D 4 HOH A 218 618 286 HOH HOH . D 4 HOH A 219 619 195 HOH HOH . D 4 HOH A 220 620 78 HOH HOH . D 4 HOH A 221 621 282 HOH HOH . D 4 HOH A 222 622 66 HOH HOH . D 4 HOH A 223 623 236 HOH HOH . D 4 HOH A 224 624 127 HOH HOH . D 4 HOH A 225 625 291 HOH HOH . D 4 HOH A 226 626 240 HOH HOH . D 4 HOH A 227 627 304 HOH HOH . D 4 HOH A 228 628 152 HOH HOH . D 4 HOH A 229 629 298 HOH HOH . D 4 HOH A 230 630 189 HOH HOH . D 4 HOH A 231 631 212 HOH HOH . D 4 HOH A 232 632 188 HOH HOH . D 4 HOH A 233 633 299 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 B B BO4 . B . B 2 0.892 2.901 -19.441 0.35 40.15 ? B BO4 301 A 1 HETATM 2 O O1 BO4 . B . B 2 1.71 1.902 -19.817 0.35 38.91 ? O1 BO4 301 A 1 HETATM 3 O O2 BO4 . B . B 2 0.316 3.446 -20.526 0.35 42.95 ? O2 BO4 301 A 1 HETATM 4 O O3 BO4 . B . B 2 1.584 3.842 -18.775 0.35 37.57 ? O3 BO4 301 A 1 HETATM 5 H HO1 BO4 . B . B 2 2.563 2.03 -19.436 0.35 46.65 ? HO1 BO4 301 A 1 HETATM 6 H HO2 BO4 . B . B 2 0.346 4.385 -20.46 0.35 51.5 ? HO2 BO4 301 A 1 HETATM 7 H HO3 BO4 . B . B 2 1.486 3.709 -17.846 0.35 45.05 ? HO3 BO4 301 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 7 #