data_8PCI # _model_server_result.job_id Cy5pa9gs4H9AiHQLL1unFQ _model_server_result.datetime_utc '2024-11-22 18:31:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8pci # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 8PCI # _exptl.entry_id 8PCI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.84 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'BORATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8PCI _cell.length_a 41.84 _cell.length_b 41.84 _cell.length_c 233.28 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8PCI _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall 'P 32 2"' _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id OG _struct_conn.ptnr1_label_comp_id SER _struct_conn.ptnr1_label_seq_id 45 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id SER _struct_conn.ptnr1_auth_seq_id 70 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id B _struct_conn.ptnr2_label_comp_id BO4 _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id BO4 _struct_conn.ptnr2_auth_seq_id 301 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id B _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.417 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'B H4 O4 -1' _chem_comp.formula_weight 78.84 _chem_comp.id BO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'BORATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag B O1 BO4 sing 70 n n B O2 BO4 sing 71 n n B O3 BO4 sing 72 n n B O4 BO4 sing 73 n n O1 HO1 BO4 sing 74 n n O2 HO2 BO4 sing 75 n n O3 HO3 BO4 sing 76 n n O4 HO4 BO4 sing 77 n n # _atom_sites.entry_id 8PCI _atom_sites.fract_transf_matrix[1][1] 0.023901 _atom_sites.fract_transf_matrix[1][2] 0.013799 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.027598 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004287 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BO4 A 1 301 302 BO4 BAB . C 3 SO4 A 1 302 1 SO4 SO4 . D 4 HOH A 1 401 63 HOH HOH . D 4 HOH A 2 402 44 HOH HOH . D 4 HOH A 3 403 361 HOH HOH . D 4 HOH A 4 404 366 HOH HOH . D 4 HOH A 5 405 50 HOH HOH . D 4 HOH A 6 406 88 HOH HOH . D 4 HOH A 7 407 175 HOH HOH . D 4 HOH A 8 408 72 HOH HOH . D 4 HOH A 9 409 353 HOH HOH . D 4 HOH A 10 410 174 HOH HOH . D 4 HOH A 11 411 10 HOH HOH . D 4 HOH A 12 412 91 HOH HOH . D 4 HOH A 13 413 208 HOH HOH . D 4 HOH A 14 414 54 HOH HOH . D 4 HOH A 15 415 101 HOH HOH . D 4 HOH A 16 416 111 HOH HOH . D 4 HOH A 17 417 49 HOH HOH . D 4 HOH A 18 418 60 HOH HOH . D 4 HOH A 19 419 79 HOH HOH . D 4 HOH A 20 420 120 HOH HOH . D 4 HOH A 21 421 43 HOH HOH . D 4 HOH A 22 422 130 HOH HOH . D 4 HOH A 23 423 81 HOH HOH . D 4 HOH A 24 424 13 HOH HOH . D 4 HOH A 25 425 99 HOH HOH . D 4 HOH A 26 426 102 HOH HOH . D 4 HOH A 27 427 30 HOH HOH . D 4 HOH A 28 428 32 HOH HOH . D 4 HOH A 29 429 95 HOH HOH . D 4 HOH A 30 430 45 HOH HOH . D 4 HOH A 31 431 1 HOH HOH . D 4 HOH A 32 432 21 HOH HOH . D 4 HOH A 33 433 80 HOH HOH . D 4 HOH A 34 434 36 HOH HOH . D 4 HOH A 35 435 9 HOH HOH . D 4 HOH A 36 436 33 HOH HOH . D 4 HOH A 37 437 64 HOH HOH . D 4 HOH A 38 438 8 HOH HOH . D 4 HOH A 39 439 82 HOH HOH . D 4 HOH A 40 440 58 HOH HOH . D 4 HOH A 41 441 112 HOH HOH . D 4 HOH A 42 442 74 HOH HOH . D 4 HOH A 43 443 135 HOH HOH . D 4 HOH A 44 444 133 HOH HOH . D 4 HOH A 45 445 76 HOH HOH . D 4 HOH A 46 446 98 HOH HOH . D 4 HOH A 47 447 151 HOH HOH . D 4 HOH A 48 448 28 HOH HOH . D 4 HOH A 49 449 29 HOH HOH . D 4 HOH A 50 450 16 HOH HOH . D 4 HOH A 51 451 5 HOH HOH . D 4 HOH A 52 452 47 HOH HOH . D 4 HOH A 53 453 22 HOH HOH . D 4 HOH A 54 454 145 HOH HOH . D 4 HOH A 55 455 11 HOH HOH . D 4 HOH A 56 456 4 HOH HOH . D 4 HOH A 57 457 35 HOH HOH . D 4 HOH A 58 458 52 HOH HOH . D 4 HOH A 59 459 18 HOH HOH . D 4 HOH A 60 460 71 HOH HOH . D 4 HOH A 61 461 110 HOH HOH . D 4 HOH A 62 462 78 HOH HOH . D 4 HOH A 63 463 124 HOH HOH . D 4 HOH A 64 464 3 HOH HOH . D 4 HOH A 65 465 69 HOH HOH . D 4 HOH A 66 466 2 HOH HOH . D 4 HOH A 67 467 87 HOH HOH . D 4 HOH A 68 468 34 HOH HOH . D 4 HOH A 69 469 125 HOH HOH . D 4 HOH A 70 470 6 HOH HOH . D 4 HOH A 71 471 75 HOH HOH . D 4 HOH A 72 472 27 HOH HOH . D 4 HOH A 73 473 65 HOH HOH . D 4 HOH A 74 474 103 HOH HOH . D 4 HOH A 75 475 100 HOH HOH . D 4 HOH A 76 476 26 HOH HOH . D 4 HOH A 77 477 93 HOH HOH . D 4 HOH A 78 478 104 HOH HOH . D 4 HOH A 79 479 56 HOH HOH . D 4 HOH A 80 480 97 HOH HOH . D 4 HOH A 81 481 7 HOH HOH . D 4 HOH A 82 482 77 HOH HOH . D 4 HOH A 83 483 38 HOH HOH . D 4 HOH A 84 484 129 HOH HOH . D 4 HOH A 85 485 25 HOH HOH . D 4 HOH A 86 486 136 HOH HOH . D 4 HOH A 87 487 364 HOH HOH . D 4 HOH A 88 488 55 HOH HOH . D 4 HOH A 89 489 107 HOH HOH . D 4 HOH A 90 490 17 HOH HOH . D 4 HOH A 91 491 118 HOH HOH . D 4 HOH A 92 492 24 HOH HOH . D 4 HOH A 93 493 12 HOH HOH . D 4 HOH A 94 494 57 HOH HOH . D 4 HOH A 95 495 62 HOH HOH . D 4 HOH A 96 496 39 HOH HOH . D 4 HOH A 97 497 42 HOH HOH . D 4 HOH A 98 498 140 HOH HOH . D 4 HOH A 99 499 94 HOH HOH . D 4 HOH A 100 500 15 HOH HOH . D 4 HOH A 101 501 68 HOH HOH . D 4 HOH A 102 502 141 HOH HOH . D 4 HOH A 103 503 66 HOH HOH . D 4 HOH A 104 504 53 HOH HOH . D 4 HOH A 105 505 119 HOH HOH . D 4 HOH A 106 506 73 HOH HOH . D 4 HOH A 107 507 41 HOH HOH . D 4 HOH A 108 508 92 HOH HOH . D 4 HOH A 109 509 46 HOH HOH . D 4 HOH A 110 510 149 HOH HOH . D 4 HOH A 111 511 186 HOH HOH . D 4 HOH A 112 512 121 HOH HOH . D 4 HOH A 113 513 14 HOH HOH . D 4 HOH A 114 514 146 HOH HOH . D 4 HOH A 115 515 23 HOH HOH . D 4 HOH A 116 516 123 HOH HOH . D 4 HOH A 117 517 90 HOH HOH . D 4 HOH A 118 518 127 HOH HOH . D 4 HOH A 119 519 31 HOH HOH . D 4 HOH A 120 520 40 HOH HOH . D 4 HOH A 121 521 365 HOH HOH . D 4 HOH A 122 522 51 HOH HOH . D 4 HOH A 123 523 20 HOH HOH . D 4 HOH A 124 524 59 HOH HOH . D 4 HOH A 125 525 19 HOH HOH . D 4 HOH A 126 526 37 HOH HOH . D 4 HOH A 127 527 139 HOH HOH . D 4 HOH A 128 528 114 HOH HOH . D 4 HOH A 129 529 255 HOH HOH . D 4 HOH A 130 530 83 HOH HOH . D 4 HOH A 131 531 138 HOH HOH . D 4 HOH A 132 532 132 HOH HOH . D 4 HOH A 133 533 142 HOH HOH . D 4 HOH A 134 534 126 HOH HOH . D 4 HOH A 135 535 131 HOH HOH . D 4 HOH A 136 536 352 HOH HOH . D 4 HOH A 137 537 148 HOH HOH . D 4 HOH A 138 538 363 HOH HOH . D 4 HOH A 139 539 117 HOH HOH . D 4 HOH A 140 540 105 HOH HOH . D 4 HOH A 141 541 128 HOH HOH . D 4 HOH A 142 542 85 HOH HOH . D 4 HOH A 143 543 256 HOH HOH . D 4 HOH A 144 544 108 HOH HOH . D 4 HOH A 145 545 86 HOH HOH . D 4 HOH A 146 546 144 HOH HOH . D 4 HOH A 147 547 147 HOH HOH . D 4 HOH A 148 548 109 HOH HOH . D 4 HOH A 149 549 48 HOH HOH . D 4 HOH A 150 550 113 HOH HOH . D 4 HOH A 151 551 106 HOH HOH . D 4 HOH A 152 552 137 HOH HOH . D 4 HOH A 153 553 134 HOH HOH . D 4 HOH A 154 554 67 HOH HOH . D 4 HOH A 155 555 115 HOH HOH . D 4 HOH A 156 556 254 HOH HOH . D 4 HOH A 157 557 61 HOH HOH . D 4 HOH A 158 558 122 HOH HOH . D 4 HOH A 159 559 70 HOH HOH . D 4 HOH A 160 560 89 HOH HOH . D 4 HOH A 161 561 84 HOH HOH . D 4 HOH A 162 562 116 HOH HOH . D 4 HOH A 163 563 150 HOH HOH . D 4 HOH A 164 564 143 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 B B BO4 . B . B 2 0.821 2.943 -19.432 0.44 22.99 ? B BO4 301 A 1 HETATM 2 O O1 BO4 . B . B 2 1.665 1.931 -19.774 0.44 18.36 ? O1 BO4 301 A 1 HETATM 3 O O2 BO4 . B . B 2 0.142 3.397 -20.52 0.44 26.9 ? O2 BO4 301 A 1 HETATM 4 O O3 BO4 . B . B 2 1.466 3.963 -18.801 0.44 15.66 ? O3 BO4 301 A 1 HETATM 5 H HO1 BO4 . B . B 2 2.535 2.137 -19.474 0.44 22.05 ? HO1 BO4 301 A 1 HETATM 6 H HO2 BO4 . B . B 2 0.262 4.328 -20.597 0.44 32.3 ? HO2 BO4 301 A 1 HETATM 7 H HO3 BO4 . B . B 2 1.518 3.776 -17.881 0.44 18.82 ? HO3 BO4 301 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 7 #