data_8PCJ # _model_server_result.job_id lgcFgxb3oydeTNfvMjIByQ _model_server_result.datetime_utc '2024-11-22 12:32:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8pcj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 8PCJ # _exptl.entry_id 8PCJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.84 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'BORATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8PCJ _cell.length_a 41.84 _cell.length_b 41.84 _cell.length_c 233.28 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8PCJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall 'P 32 2"' _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id OG _struct_conn.ptnr1_label_comp_id SER _struct_conn.ptnr1_label_seq_id 45 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id SER _struct_conn.ptnr1_auth_seq_id 70 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id B _struct_conn.ptnr2_label_comp_id BO4 _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id BO4 _struct_conn.ptnr2_auth_seq_id 301 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id B _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.44 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'B H4 O4 -1' _chem_comp.formula_weight 78.84 _chem_comp.id BO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'BORATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag B O1 BO4 sing 70 n n B O2 BO4 sing 71 n n B O3 BO4 sing 72 n n B O4 BO4 sing 73 n n O1 HO1 BO4 sing 74 n n O2 HO2 BO4 sing 75 n n O3 HO3 BO4 sing 76 n n O4 HO4 BO4 sing 77 n n # _atom_sites.entry_id 8PCJ _atom_sites.fract_transf_matrix[1][1] 0.023901 _atom_sites.fract_transf_matrix[1][2] 0.013799 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.027598 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004287 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BO4 A 1 301 302 BO4 BAB . C 3 SO4 A 1 302 1 SO4 SO4 . D 4 HOH A 1 401 224 HOH HOH . D 4 HOH A 2 402 337 HOH HOH . D 4 HOH A 3 403 44 HOH HOH . D 4 HOH A 4 404 118 HOH HOH . D 4 HOH A 5 405 318 HOH HOH . D 4 HOH A 6 406 50 HOH HOH . D 4 HOH A 7 407 175 HOH HOH . D 4 HOH A 8 408 69 HOH HOH . D 4 HOH A 9 409 153 HOH HOH . D 4 HOH A 10 410 361 HOH HOH . D 4 HOH A 11 411 43 HOH HOH . D 4 HOH A 12 412 328 HOH HOH . D 4 HOH A 13 413 351 HOH HOH . D 4 HOH A 14 414 238 HOH HOH . D 4 HOH A 15 415 80 HOH HOH . D 4 HOH A 16 416 353 HOH HOH . D 4 HOH A 17 417 174 HOH HOH . D 4 HOH A 18 418 65 HOH HOH . D 4 HOH A 19 419 251 HOH HOH . D 4 HOH A 20 420 173 HOH HOH . D 4 HOH A 21 421 10 HOH HOH . D 4 HOH A 22 422 181 HOH HOH . D 4 HOH A 23 423 214 HOH HOH . D 4 HOH A 24 424 303 HOH HOH . D 4 HOH A 25 425 53 HOH HOH . D 4 HOH A 26 426 348 HOH HOH . D 4 HOH A 27 427 191 HOH HOH . D 4 HOH A 28 428 207 HOH HOH . D 4 HOH A 29 429 30 HOH HOH . D 4 HOH A 30 430 57 HOH HOH . D 4 HOH A 31 431 92 HOH HOH . D 4 HOH A 32 432 232 HOH HOH . D 4 HOH A 33 433 309 HOH HOH . D 4 HOH A 34 434 70 HOH HOH . D 4 HOH A 35 435 46 HOH HOH . D 4 HOH A 36 436 82 HOH HOH . D 4 HOH A 37 437 33 HOH HOH . D 4 HOH A 38 438 241 HOH HOH . D 4 HOH A 39 439 252 HOH HOH . D 4 HOH A 40 440 32 HOH HOH . D 4 HOH A 41 441 220 HOH HOH . D 4 HOH A 42 442 36 HOH HOH . D 4 HOH A 43 443 210 HOH HOH . D 4 HOH A 44 444 21 HOH HOH . D 4 HOH A 45 445 219 HOH HOH . D 4 HOH A 46 446 48 HOH HOH . D 4 HOH A 47 447 1 HOH HOH . D 4 HOH A 48 448 110 HOH HOH . D 4 HOH A 49 449 18 HOH HOH . D 4 HOH A 50 450 95 HOH HOH . D 4 HOH A 51 451 63 HOH HOH . D 4 HOH A 52 452 8 HOH HOH . D 4 HOH A 53 453 198 HOH HOH . D 4 HOH A 54 454 182 HOH HOH . D 4 HOH A 55 455 51 HOH HOH . D 4 HOH A 56 456 6 HOH HOH . D 4 HOH A 57 457 178 HOH HOH . D 4 HOH A 58 458 13 HOH HOH . D 4 HOH A 59 459 281 HOH HOH . D 4 HOH A 60 460 45 HOH HOH . D 4 HOH A 61 461 5 HOH HOH . D 4 HOH A 62 462 16 HOH HOH . D 4 HOH A 63 463 4 HOH HOH . D 4 HOH A 64 464 179 HOH HOH . D 4 HOH A 65 465 35 HOH HOH . D 4 HOH A 66 466 3 HOH HOH . D 4 HOH A 67 467 79 HOH HOH . D 4 HOH A 68 468 94 HOH HOH . D 4 HOH A 69 469 185 HOH HOH . D 4 HOH A 70 470 28 HOH HOH . D 4 HOH A 71 471 76 HOH HOH . D 4 HOH A 72 472 2 HOH HOH . D 4 HOH A 73 473 148 HOH HOH . D 4 HOH A 74 474 258 HOH HOH . D 4 HOH A 75 475 84 HOH HOH . D 4 HOH A 76 476 22 HOH HOH . D 4 HOH A 77 477 11 HOH HOH . D 4 HOH A 78 478 177 HOH HOH . D 4 HOH A 79 479 159 HOH HOH . D 4 HOH A 80 480 7 HOH HOH . D 4 HOH A 81 481 93 HOH HOH . D 4 HOH A 82 482 9 HOH HOH . D 4 HOH A 83 483 71 HOH HOH . D 4 HOH A 84 484 25 HOH HOH . D 4 HOH A 85 485 336 HOH HOH . D 4 HOH A 86 486 176 HOH HOH . D 4 HOH A 87 487 183 HOH HOH . D 4 HOH A 88 488 87 HOH HOH . D 4 HOH A 89 489 83 HOH HOH . D 4 HOH A 90 490 273 HOH HOH . D 4 HOH A 91 491 12 HOH HOH . D 4 HOH A 92 492 29 HOH HOH . D 4 HOH A 93 493 208 HOH HOH . D 4 HOH A 94 494 338 HOH HOH . D 4 HOH A 95 495 34 HOH HOH . D 4 HOH A 96 496 154 HOH HOH . D 4 HOH A 97 497 347 HOH HOH . D 4 HOH A 98 498 58 HOH HOH . D 4 HOH A 99 499 15 HOH HOH . D 4 HOH A 100 500 60 HOH HOH . D 4 HOH A 101 501 216 HOH HOH . D 4 HOH A 102 502 274 HOH HOH . D 4 HOH A 103 503 72 HOH HOH . D 4 HOH A 104 504 156 HOH HOH . D 4 HOH A 105 505 26 HOH HOH . D 4 HOH A 106 506 213 HOH HOH . D 4 HOH A 107 507 38 HOH HOH . D 4 HOH A 108 508 180 HOH HOH . D 4 HOH A 109 509 67 HOH HOH . D 4 HOH A 110 510 39 HOH HOH . D 4 HOH A 111 511 55 HOH HOH . D 4 HOH A 112 512 27 HOH HOH . D 4 HOH A 113 513 61 HOH HOH . D 4 HOH A 114 514 310 HOH HOH . D 4 HOH A 115 515 349 HOH HOH . D 4 HOH A 116 516 85 HOH HOH . D 4 HOH A 117 517 41 HOH HOH . D 4 HOH A 118 518 344 HOH HOH . D 4 HOH A 119 519 255 HOH HOH . D 4 HOH A 120 520 247 HOH HOH . D 4 HOH A 121 521 280 HOH HOH . D 4 HOH A 122 522 42 HOH HOH . D 4 HOH A 123 523 289 HOH HOH . D 4 HOH A 124 524 261 HOH HOH . D 4 HOH A 125 525 165 HOH HOH . D 4 HOH A 126 526 206 HOH HOH . D 4 HOH A 127 527 276 HOH HOH . D 4 HOH A 128 528 81 HOH HOH . D 4 HOH A 129 529 259 HOH HOH . D 4 HOH A 130 530 164 HOH HOH . D 4 HOH A 131 531 272 HOH HOH . D 4 HOH A 132 532 17 HOH HOH . D 4 HOH A 133 533 24 HOH HOH . D 4 HOH A 134 534 47 HOH HOH . D 4 HOH A 135 535 278 HOH HOH . D 4 HOH A 136 536 56 HOH HOH . D 4 HOH A 137 537 122 HOH HOH . D 4 HOH A 138 538 203 HOH HOH . D 4 HOH A 139 539 186 HOH HOH . D 4 HOH A 140 540 194 HOH HOH . D 4 HOH A 141 541 64 HOH HOH . D 4 HOH A 142 542 184 HOH HOH . D 4 HOH A 143 543 226 HOH HOH . D 4 HOH A 144 544 327 HOH HOH . D 4 HOH A 145 545 257 HOH HOH . D 4 HOH A 146 546 31 HOH HOH . D 4 HOH A 147 547 187 HOH HOH . D 4 HOH A 148 548 23 HOH HOH . D 4 HOH A 149 549 74 HOH HOH . D 4 HOH A 150 550 151 HOH HOH . D 4 HOH A 151 551 147 HOH HOH . D 4 HOH A 152 552 19 HOH HOH . D 4 HOH A 153 553 266 HOH HOH . D 4 HOH A 154 554 14 HOH HOH . D 4 HOH A 155 555 99 HOH HOH . D 4 HOH A 156 556 283 HOH HOH . D 4 HOH A 157 557 37 HOH HOH . D 4 HOH A 158 558 133 HOH HOH . D 4 HOH A 159 559 342 HOH HOH . D 4 HOH A 160 560 54 HOH HOH . D 4 HOH A 161 561 288 HOH HOH . D 4 HOH A 162 562 253 HOH HOH . D 4 HOH A 163 563 20 HOH HOH . D 4 HOH A 164 564 123 HOH HOH . D 4 HOH A 165 565 40 HOH HOH . D 4 HOH A 166 566 352 HOH HOH . D 4 HOH A 167 567 275 HOH HOH . D 4 HOH A 168 568 242 HOH HOH . D 4 HOH A 169 569 317 HOH HOH . D 4 HOH A 170 570 117 HOH HOH . D 4 HOH A 171 571 330 HOH HOH . D 4 HOH A 172 572 201 HOH HOH . D 4 HOH A 173 573 233 HOH HOH . D 4 HOH A 174 574 199 HOH HOH . D 4 HOH A 175 575 262 HOH HOH . D 4 HOH A 176 576 135 HOH HOH . D 4 HOH A 177 577 264 HOH HOH . D 4 HOH A 178 578 315 HOH HOH . D 4 HOH A 179 579 196 HOH HOH . D 4 HOH A 180 580 113 HOH HOH . D 4 HOH A 181 581 363 HOH HOH . D 4 HOH A 182 582 248 HOH HOH . D 4 HOH A 183 583 256 HOH HOH . D 4 HOH A 184 584 234 HOH HOH . D 4 HOH A 185 585 149 HOH HOH . D 4 HOH A 186 586 279 HOH HOH . D 4 HOH A 187 587 296 HOH HOH . D 4 HOH A 188 588 209 HOH HOH . D 4 HOH A 189 589 265 HOH HOH . D 4 HOH A 190 590 246 HOH HOH . D 4 HOH A 191 591 350 HOH HOH . D 4 HOH A 192 592 227 HOH HOH . D 4 HOH A 193 593 228 HOH HOH . D 4 HOH A 194 594 114 HOH HOH . D 4 HOH A 195 595 260 HOH HOH . D 4 HOH A 196 596 287 HOH HOH . D 4 HOH A 197 597 200 HOH HOH . D 4 HOH A 198 598 190 HOH HOH . D 4 HOH A 199 599 300 HOH HOH . D 4 HOH A 200 600 311 HOH HOH . D 4 HOH A 201 601 305 HOH HOH . D 4 HOH A 202 602 229 HOH HOH . D 4 HOH A 203 603 109 HOH HOH . D 4 HOH A 204 604 341 HOH HOH . D 4 HOH A 205 605 271 HOH HOH . D 4 HOH A 206 606 197 HOH HOH . D 4 HOH A 207 607 155 HOH HOH . D 4 HOH A 208 608 225 HOH HOH . D 4 HOH A 209 609 105 HOH HOH . D 4 HOH A 210 610 293 HOH HOH . D 4 HOH A 211 611 211 HOH HOH . D 4 HOH A 212 612 221 HOH HOH . D 4 HOH A 213 613 230 HOH HOH . D 4 HOH A 214 614 218 HOH HOH . D 4 HOH A 215 615 326 HOH HOH . D 4 HOH A 216 616 204 HOH HOH . D 4 HOH A 217 617 49 HOH HOH . D 4 HOH A 218 618 205 HOH HOH . D 4 HOH A 219 619 335 HOH HOH . D 4 HOH A 220 620 193 HOH HOH . D 4 HOH A 221 621 215 HOH HOH . D 4 HOH A 222 622 239 HOH HOH . D 4 HOH A 223 623 73 HOH HOH . D 4 HOH A 224 624 301 HOH HOH . D 4 HOH A 225 625 254 HOH HOH . D 4 HOH A 226 626 322 HOH HOH . D 4 HOH A 227 627 334 HOH HOH . D 4 HOH A 228 628 236 HOH HOH . D 4 HOH A 229 629 160 HOH HOH . D 4 HOH A 230 630 286 HOH HOH . D 4 HOH A 231 631 291 HOH HOH . D 4 HOH A 232 632 294 HOH HOH . D 4 HOH A 233 633 78 HOH HOH . D 4 HOH A 234 634 195 HOH HOH . D 4 HOH A 235 635 66 HOH HOH . D 4 HOH A 236 636 282 HOH HOH . D 4 HOH A 237 637 267 HOH HOH . D 4 HOH A 238 638 189 HOH HOH . D 4 HOH A 239 639 127 HOH HOH . D 4 HOH A 240 640 104 HOH HOH . D 4 HOH A 241 641 304 HOH HOH . D 4 HOH A 242 642 152 HOH HOH . D 4 HOH A 243 643 240 HOH HOH . D 4 HOH A 244 644 212 HOH HOH . D 4 HOH A 245 645 298 HOH HOH . D 4 HOH A 246 646 188 HOH HOH . D 4 HOH A 247 647 299 HOH HOH . D 4 HOH A 248 648 314 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 B B BO4 . B . B 2 0.863 2.982 -19.433 0.53 36.18 ? B BO4 301 A 1 HETATM 2 O O1 BO4 . B . B 2 1.678 1.933 -19.671 0.53 25.1 ? O1 BO4 301 A 1 HETATM 3 O O2 BO4 . B . B 2 0.312 3.37 -20.602 0.53 31.94 ? O2 BO4 301 A 1 HETATM 4 O O3 BO4 . B . B 2 1.492 4.009 -18.798 0.53 17.49 ? O3 BO4 301 A 1 HETATM 5 H HO1 BO4 . B . B 2 2.527 2.106 -19.297 0.53 30.12 ? HO1 BO4 301 A 1 HETATM 6 H HO2 BO4 . B . B 2 0.295 4.311 -20.645 0.53 38.32 ? HO2 BO4 301 A 1 HETATM 7 H HO3 BO4 . B . B 2 1.599 3.787 -17.89 0.53 20.98 ? HO3 BO4 301 A 1 # _model_server_stats.io_time_ms 132 _model_server_stats.parse_time_ms 35 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 7 #