data_8PH5
#
_model_server_result.job_id            Uhj6a5aLObSyCVyU_IyP1w 
_model_server_result.datetime_utc      '2025-01-09 05:20:13' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8ph5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":201}' 
#
_entry.id    8PH5 
#
_exptl.entry_id    8PH5 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              238.305 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8PH5 
_cell.length_a            77 
_cell.length_b            77 
_cell.length_c            39.2 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8PH5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 6 AAA CYS 6 1_555 A SG CYS 127 AAA CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? 
disulf ? disulf2 A SG CYS 30 AAA CYS 30 1_555 A SG CYS 115 AAA CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.934 ? 
disulf ? disulf3 A SG CYS 64 AAA CYS 64 1_555 A SG CYS 80 AAA CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? 
disulf ? disulf4 A SG CYS 76 AAA CYS 76 1_555 A SG CYS 94 AAA CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.954 ? 
metalc ? metalc1 A OD1 ASP 101 AAA ASP 101 1_555 C RU1 ZJK . AAA ZJK 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? 
metalc ? metalc2 A OD2 ASP 101 AAA ASP 101 1_555 C RU2 ZJK . AAA ZJK 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.123 ? 
metalc ? metalc3 A OD1 ASP 119 AAA ASP 119 1_555 D RU2 ZJK . AAA ZJK 203 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.129 ? 
metalc ? metalc4 A OD2 ASP 119 AAA ASP 119 1_555 D RU1 ZJK . AAA ZJK 203 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.916 ? 
metalc ? metalc5 C RU1 ZJK . AAA ZJK 202 1_555 E O HOH . AAA HOH 384 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.432 ? 
#
_chem_comp.formula           'C8 H18 N2 O4 S' 
_chem_comp.formula_weight    238.305 
_chem_comp.id                EPE 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     HEPES 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 EPE sing 83 n n 
N1 C6 EPE sing 84 n n 
N1 C9 EPE sing 85 n n 
C2 C3 EPE sing 86 n n 
C2 H21 EPE sing 87 n n 
C2 H22 EPE sing 88 n n 
C3 N4 EPE sing 89 n n 
C3 H31 EPE sing 90 n n 
C3 H32 EPE sing 91 n n 
N4 C5 EPE sing 92 n n 
N4 C7 EPE sing 93 n n 
C5 C6 EPE sing 94 n n 
C5 H51 EPE sing 95 n n 
C5 H52 EPE sing 96 n n 
C6 H61 EPE sing 97 n n 
C6 H62 EPE sing 98 n n 
C7 C8 EPE sing 99 n n 
C7 H71 EPE sing 100 n n 
C7 H72 EPE sing 101 n n 
C8 O8 EPE sing 102 n n 
C8 H81 EPE sing 103 n n 
C8 H82 EPE sing 104 n n 
O8 HO8 EPE sing 105 n n 
C9 C10 EPE sing 106 n n 
C9 H91 EPE sing 107 n n 
C9 H92 EPE sing 108 n n 
C10 S EPE sing 109 n n 
C10 H101 EPE sing 110 n n 
C10 H102 EPE sing 111 n n 
S O1S EPE doub 112 n n 
S O2S EPE doub 113 n n 
S O3S EPE sing 114 n n 
O3S HOS3 EPE sing 115 n n 
#
_atom_sites.entry_id                     8PH5 
_atom_sites.fract_transf_matrix[1][1]    0.012987 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012987 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.02551 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 EPE AAA 1 201 202 EPE EPE . 
C 3 ZJK AAA 1 202 1 ZJK TMB . 
D 3 ZJK AAA 1 203 2 ZJK TMB . 
E 4 HOH AAA 1 301 5 HOH HOH . 
E 4 HOH AAA 2 302 8 HOH HOH . 
E 4 HOH AAA 3 303 46 HOH HOH . 
E 4 HOH AAA 4 304 137 HOH HOH . 
E 4 HOH AAA 5 305 119 HOH HOH . 
E 4 HOH AAA 6 306 72 HOH HOH . 
E 4 HOH AAA 7 307 39 HOH HOH . 
E 4 HOH AAA 8 308 126 HOH HOH . 
E 4 HOH AAA 9 309 136 HOH HOH . 
E 4 HOH AAA 10 310 25 HOH HOH . 
E 4 HOH AAA 11 311 45 HOH HOH . 
E 4 HOH AAA 12 312 71 HOH HOH . 
E 4 HOH AAA 13 313 55 HOH HOH . 
E 4 HOH AAA 14 314 123 HOH HOH . 
E 4 HOH AAA 15 315 57 HOH HOH . 
E 4 HOH AAA 16 316 31 HOH HOH . 
E 4 HOH AAA 17 317 58 HOH HOH . 
E 4 HOH AAA 18 318 34 HOH HOH . 
E 4 HOH AAA 19 319 65 HOH HOH . 
E 4 HOH AAA 20 320 139 HOH HOH . 
E 4 HOH AAA 21 321 33 HOH HOH . 
E 4 HOH AAA 22 322 3 HOH HOH . 
E 4 HOH AAA 23 323 86 HOH HOH . 
E 4 HOH AAA 24 324 20 HOH HOH . 
E 4 HOH AAA 25 325 107 HOH HOH . 
E 4 HOH AAA 26 326 64 HOH HOH . 
E 4 HOH AAA 27 327 26 HOH HOH . 
E 4 HOH AAA 28 328 70 HOH HOH . 
E 4 HOH AAA 29 329 19 HOH HOH . 
E 4 HOH AAA 30 330 93 HOH HOH . 
E 4 HOH AAA 31 331 2 HOH HOH . 
E 4 HOH AAA 32 332 116 HOH HOH . 
E 4 HOH AAA 33 333 32 HOH HOH . 
E 4 HOH AAA 34 334 13 HOH HOH . 
E 4 HOH AAA 35 335 24 HOH HOH . 
E 4 HOH AAA 36 336 114 HOH HOH . 
E 4 HOH AAA 37 337 91 HOH HOH . 
E 4 HOH AAA 38 338 12 HOH HOH . 
E 4 HOH AAA 39 339 105 HOH HOH . 
E 4 HOH AAA 40 340 14 HOH HOH . 
E 4 HOH AAA 41 341 117 HOH HOH . 
E 4 HOH AAA 42 342 9 HOH HOH . 
E 4 HOH AAA 43 343 4 HOH HOH . 
E 4 HOH AAA 44 344 36 HOH HOH . 
E 4 HOH AAA 45 345 40 HOH HOH . 
E 4 HOH AAA 46 346 104 HOH HOH . 
E 4 HOH AAA 47 347 47 HOH HOH . 
E 4 HOH AAA 48 348 63 HOH HOH . 
E 4 HOH AAA 49 349 52 HOH HOH . 
E 4 HOH AAA 50 350 18 HOH HOH . 
E 4 HOH AAA 51 351 7 HOH HOH . 
E 4 HOH AAA 52 352 30 HOH HOH . 
E 4 HOH AAA 53 353 77 HOH HOH . 
E 4 HOH AAA 54 354 109 HOH HOH . 
E 4 HOH AAA 55 355 54 HOH HOH . 
E 4 HOH AAA 56 356 16 HOH HOH . 
E 4 HOH AAA 57 357 53 HOH HOH . 
E 4 HOH AAA 58 358 27 HOH HOH . 
E 4 HOH AAA 59 359 110 HOH HOH . 
E 4 HOH AAA 60 360 83 HOH HOH . 
E 4 HOH AAA 61 361 10 HOH HOH . 
E 4 HOH AAA 62 362 22 HOH HOH . 
E 4 HOH AAA 63 363 43 HOH HOH . 
E 4 HOH AAA 64 364 67 HOH HOH . 
E 4 HOH AAA 65 365 48 HOH HOH . 
E 4 HOH AAA 66 366 74 HOH HOH . 
E 4 HOH AAA 67 367 98 HOH HOH . 
E 4 HOH AAA 68 368 28 HOH HOH . 
E 4 HOH AAA 69 369 6 HOH HOH . 
E 4 HOH AAA 70 370 37 HOH HOH . 
E 4 HOH AAA 71 371 23 HOH HOH . 
E 4 HOH AAA 72 372 69 HOH HOH . 
E 4 HOH AAA 73 373 38 HOH HOH . 
E 4 HOH AAA 74 374 59 HOH HOH . 
E 4 HOH AAA 75 375 76 HOH HOH . 
E 4 HOH AAA 76 376 29 HOH HOH . 
E 4 HOH AAA 77 377 11 HOH HOH . 
E 4 HOH AAA 78 378 108 HOH HOH . 
E 4 HOH AAA 79 379 81 HOH HOH . 
E 4 HOH AAA 80 380 15 HOH HOH . 
E 4 HOH AAA 81 381 129 HOH HOH . 
E 4 HOH AAA 82 382 84 HOH HOH . 
E 4 HOH AAA 83 383 42 HOH HOH . 
E 4 HOH AAA 84 384 1 HOH HOH . 
E 4 HOH AAA 85 385 21 HOH HOH . 
E 4 HOH AAA 86 386 94 HOH HOH . 
E 4 HOH AAA 87 387 125 HOH HOH . 
E 4 HOH AAA 88 388 99 HOH HOH . 
E 4 HOH AAA 89 389 135 HOH HOH . 
E 4 HOH AAA 90 390 120 HOH HOH . 
E 4 HOH AAA 91 391 62 HOH HOH . 
E 4 HOH AAA 92 392 115 HOH HOH . 
E 4 HOH AAA 93 393 49 HOH HOH . 
E 4 HOH AAA 94 394 118 HOH HOH . 
E 4 HOH AAA 95 395 60 HOH HOH . 
E 4 HOH AAA 96 396 106 HOH HOH . 
E 4 HOH AAA 97 397 113 HOH HOH . 
E 4 HOH AAA 98 398 41 HOH HOH . 
E 4 HOH AAA 99 399 121 HOH HOH . 
E 4 HOH AAA 100 400 66 HOH HOH . 
E 4 HOH AAA 101 401 97 HOH HOH . 
E 4 HOH AAA 102 402 78 HOH HOH . 
E 4 HOH AAA 103 403 111 HOH HOH . 
E 4 HOH AAA 104 404 92 HOH HOH . 
E 4 HOH AAA 105 405 35 HOH HOH . 
E 4 HOH AAA 106 406 56 HOH HOH . 
E 4 HOH AAA 107 407 79 HOH HOH . 
E 4 HOH AAA 108 408 61 HOH HOH . 
E 4 HOH AAA 109 409 100 HOH HOH . 
E 4 HOH AAA 110 410 140 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 EPE . . . B 2 -9.469 -24.168 4.989 0.8 25.24 0 N1 EPE 201 AAA 1 
HETATM 2 C C2 EPE . . . B 2 -8.968 -24.736 3.721 0.8 21.77 0 C2 EPE 201 AAA 1 
HETATM 3 C C3 EPE . . . B 2 -7.452 -24.728 3.689 0.8 20.09 0 C3 EPE 201 AAA 1 
HETATM 4 N N4 EPE . . . B 2 -6.941 -23.452 4.197 0.8 20.59 0 N4 EPE 201 AAA 1 
HETATM 5 C C5 EPE . . . B 2 -7.272 -23.334 5.634 0.8 20.86 0 C5 EPE 201 AAA 1 
HETATM 6 C C6 EPE . . . B 2 -8.452 -24.182 6.027 0.8 27.01 0 C6 EPE 201 AAA 1 
HETATM 7 C C7 EPE . . . B 2 -5.485 -23.331 4.063 0.8 18.7 0 C7 EPE 201 AAA 1 
HETATM 8 C C8 EPE . . . B 2 -5.008 -23.287 2.637 0.8 17.64 0 C8 EPE 201 AAA 1 
HETATM 9 O O8 EPE . . . B 2 -4.773 -24.624 2.24 0.8 16.88 0 O8 EPE 201 AAA 1 
HETATM 10 C C9 EPE . . . B 2 -10.8 -24.568 5.484 0.8 27.83 0 C9 EPE 201 AAA 1 
HETATM 11 C C10 EPE . . . B 2 -11.611 -25.606 4.752 0.8 25.29 0 C10 EPE 201 AAA 1 
HETATM 12 S S EPE . . . B 2 -13.291 -25.624 5.352 0.8 26.99 0 S EPE 201 AAA 1 
HETATM 13 O O1S EPE . . . B 2 -13.869 -24.364 4.985 0.8 26.11 0 O1S EPE 201 AAA 1 
HETATM 14 O O2S EPE . . . B 2 -13.849 -26.799 4.74 0.8 28.96 0 O2S EPE 201 AAA 1 
HETATM 15 O O3S EPE . . . B 2 -13.243 -25.774 6.856 0.8 22.55 0 O3S EPE 201 AAA 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           27 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           318 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           15 
#