data_8PH8 # _model_server_result.job_id 0s1Vppht5iYh1xZXrclnMw _model_server_result.datetime_utc '2024-11-14 03:51:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ph8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 8PH8 # _exptl.entry_id 8PH8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8PH8 _cell.length_a 76.89 _cell.length_b 76.89 _cell.length_c 37.89 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8PH8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 AAA CYS 6 1_555 A SG CYS 127 AAA CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? disulf ? disulf2 A SG CYS 30 AAA CYS 30 1_555 A SG CYS 115 AAA CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? disulf ? disulf3 A SG CYS 64 AAA CYS 64 1_555 A SG CYS 80 AAA CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? disulf ? disulf4 A SG CYS 76 AAA CYS 76 1_555 A SG CYS 94 AAA CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? metalc ? metalc1 A NZ LYS 33 AAA LYS 33 1_555 E RU1 ZJO . AAA ZJO 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.256 ? metalc ? metalc2 A O SER 60 AAA SER 60 1_555 B NA NA . AAA NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.218 ? metalc ? metalc3 A O CYS 64 AAA CYS 64 1_555 B NA NA . AAA NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.454 ? metalc ? metalc4 A OG SER 72 AAA SER 72 1_555 B NA NA . AAA NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.531 ? metalc ? metalc5 A O ARG 73 AAA ARG 73 1_555 B NA NA . AAA NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.393 ? metalc ? metalc6 A OD1 ASP 101 AAA ASP 101 1_555 D RU1 ZJO . AAA ZJO 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.136 ? metalc ? metalc7 B NA NA . AAA NA 201 1_555 I O HOH . AAA HOH 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.45 ? metalc ? metalc8 B NA NA . AAA NA 201 1_555 I O HOH . AAA HOH 418 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.4 ? metalc ? metalc9 C O3 SIN . AAA SIN 202 1_555 D RU1 ZJO . AAA ZJO 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.179 ? metalc ? metalc10 C O4 SIN . AAA SIN 202 1_555 D RU2 ZJO . AAA ZJO 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.1 ? metalc ? metalc11 D RU1 ZJO . AAA ZJO 203 1_555 F O3 SIN . AAA SIN 205 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.026 ? metalc ? metalc12 D RU1 ZJO . AAA ZJO 203 1_555 F O3 SIN . AAA SIN 205 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.153 ? metalc ? metalc13 D RU2 ZJO . AAA ZJO 203 1_555 F O4 SIN . AAA SIN 205 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.146 ? metalc ? metalc14 D RU2 ZJO . AAA ZJO 203 1_555 F O4 SIN . AAA SIN 205 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.158 ? metalc ? metalc15 E RU1 ZJO . AAA ZJO 204 1_555 G O4 SIN . AAA SIN 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.136 ? metalc ? metalc16 E RU2 ZJO . AAA ZJO 204 1_555 G O3 SIN . AAA SIN 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? metalc ? metalc17 E RU1 ZJO . AAA ZJO 204 1_555 H O4 SIN . AAA SIN 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.309 ? metalc ? metalc18 E RU2 ZJO . AAA ZJO 204 1_555 H O3 SIN . AAA SIN 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8PH8 _atom_sites.fract_transf_matrix[1][1] 0.013006 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013006 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.026392 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA AAA 1 201 131 NA NA . C 3 SIN AAA 1 202 133 SIN SIN . D 4 ZJO AAA 1 203 1 ZJO TMB . E 4 ZJO AAA 1 204 2 ZJO TMB . F 3 SIN AAA 1 205 3 SIN SIN . G 3 SIN AAA 1 206 4 SIN SIN . H 3 SIN AAA 1 207 5 SIN SIN . I 5 HOH AAA 1 301 10 HOH HOH . I 5 HOH AAA 2 302 175 HOH HOH . I 5 HOH AAA 3 303 93 HOH HOH . I 5 HOH AAA 4 304 158 HOH HOH . I 5 HOH AAA 5 305 96 HOH HOH . I 5 HOH AAA 6 306 149 HOH HOH . I 5 HOH AAA 7 307 84 HOH HOH . I 5 HOH AAA 8 308 105 HOH HOH . I 5 HOH AAA 9 309 55 HOH HOH . I 5 HOH AAA 10 310 54 HOH HOH . I 5 HOH AAA 11 311 56 HOH HOH . I 5 HOH AAA 12 312 144 HOH HOH . I 5 HOH AAA 13 313 66 HOH HOH . I 5 HOH AAA 14 314 129 HOH HOH . I 5 HOH AAA 15 315 163 HOH HOH . I 5 HOH AAA 16 316 151 HOH HOH . I 5 HOH AAA 17 317 183 HOH HOH . I 5 HOH AAA 18 318 184 HOH HOH . I 5 HOH AAA 19 319 99 HOH HOH . I 5 HOH AAA 20 320 38 HOH HOH . I 5 HOH AAA 21 321 51 HOH HOH . I 5 HOH AAA 22 322 139 HOH HOH . I 5 HOH AAA 23 323 7 HOH HOH . I 5 HOH AAA 24 324 120 HOH HOH . I 5 HOH AAA 25 325 32 HOH HOH . I 5 HOH AAA 26 326 168 HOH HOH . I 5 HOH AAA 27 327 75 HOH HOH . I 5 HOH AAA 28 328 117 HOH HOH . I 5 HOH AAA 29 329 112 HOH HOH . I 5 HOH AAA 30 330 92 HOH HOH . I 5 HOH AAA 31 331 160 HOH HOH . I 5 HOH AAA 32 332 11 HOH HOH . I 5 HOH AAA 33 333 1 HOH HOH . I 5 HOH AAA 34 334 47 HOH HOH . I 5 HOH AAA 35 335 173 HOH HOH . I 5 HOH AAA 36 336 102 HOH HOH . I 5 HOH AAA 37 337 70 HOH HOH . I 5 HOH AAA 38 338 126 HOH HOH . I 5 HOH AAA 39 339 71 HOH HOH . I 5 HOH AAA 40 340 88 HOH HOH . I 5 HOH AAA 41 341 110 HOH HOH . I 5 HOH AAA 42 342 13 HOH HOH . I 5 HOH AAA 43 343 152 HOH HOH . I 5 HOH AAA 44 344 5 HOH HOH . I 5 HOH AAA 45 345 90 HOH HOH . I 5 HOH AAA 46 346 24 HOH HOH . I 5 HOH AAA 47 347 165 HOH HOH . I 5 HOH AAA 48 348 94 HOH HOH . I 5 HOH AAA 49 349 57 HOH HOH . I 5 HOH AAA 50 350 35 HOH HOH . I 5 HOH AAA 51 351 106 HOH HOH . I 5 HOH AAA 52 352 135 HOH HOH . I 5 HOH AAA 53 353 65 HOH HOH . I 5 HOH AAA 54 354 33 HOH HOH . I 5 HOH AAA 55 355 113 HOH HOH . I 5 HOH AAA 56 356 147 HOH HOH . I 5 HOH AAA 57 357 3 HOH HOH . I 5 HOH AAA 58 358 185 HOH HOH . I 5 HOH AAA 59 359 143 HOH HOH . I 5 HOH AAA 60 360 162 HOH HOH . I 5 HOH AAA 61 361 8 HOH HOH . I 5 HOH AAA 62 362 15 HOH HOH . I 5 HOH AAA 63 363 4 HOH HOH . I 5 HOH AAA 64 364 118 HOH HOH . I 5 HOH AAA 65 365 23 HOH HOH . I 5 HOH AAA 66 366 44 HOH HOH . I 5 HOH AAA 67 367 19 HOH HOH . I 5 HOH AAA 68 368 72 HOH HOH . I 5 HOH AAA 69 369 18 HOH HOH . I 5 HOH AAA 70 370 21 HOH HOH . I 5 HOH AAA 71 371 50 HOH HOH . I 5 HOH AAA 72 372 41 HOH HOH . I 5 HOH AAA 73 373 131 HOH HOH . I 5 HOH AAA 74 374 95 HOH HOH . I 5 HOH AAA 75 375 150 HOH HOH . I 5 HOH AAA 76 376 43 HOH HOH . I 5 HOH AAA 77 377 45 HOH HOH . I 5 HOH AAA 78 378 59 HOH HOH . I 5 HOH AAA 79 379 14 HOH HOH . I 5 HOH AAA 80 380 123 HOH HOH . I 5 HOH AAA 81 381 174 HOH HOH . I 5 HOH AAA 82 382 16 HOH HOH . I 5 HOH AAA 83 383 6 HOH HOH . I 5 HOH AAA 84 384 37 HOH HOH . I 5 HOH AAA 85 385 46 HOH HOH . I 5 HOH AAA 86 386 20 HOH HOH . I 5 HOH AAA 87 387 85 HOH HOH . I 5 HOH AAA 88 388 60 HOH HOH . I 5 HOH AAA 89 389 108 HOH HOH . I 5 HOH AAA 90 390 64 HOH HOH . I 5 HOH AAA 91 391 76 HOH HOH . I 5 HOH AAA 92 392 148 HOH HOH . I 5 HOH AAA 93 393 166 HOH HOH . I 5 HOH AAA 94 394 62 HOH HOH . I 5 HOH AAA 95 395 39 HOH HOH . I 5 HOH AAA 96 396 128 HOH HOH . I 5 HOH AAA 97 397 180 HOH HOH . I 5 HOH AAA 98 398 155 HOH HOH . I 5 HOH AAA 99 399 12 HOH HOH . I 5 HOH AAA 100 400 17 HOH HOH . I 5 HOH AAA 101 401 27 HOH HOH . I 5 HOH AAA 102 402 42 HOH HOH . I 5 HOH AAA 103 403 156 HOH HOH . I 5 HOH AAA 104 404 2 HOH HOH . I 5 HOH AAA 105 405 9 HOH HOH . I 5 HOH AAA 106 406 134 HOH HOH . I 5 HOH AAA 107 407 127 HOH HOH . I 5 HOH AAA 108 408 114 HOH HOH . I 5 HOH AAA 109 409 30 HOH HOH . I 5 HOH AAA 110 410 87 HOH HOH . I 5 HOH AAA 111 411 63 HOH HOH . I 5 HOH AAA 112 412 97 HOH HOH . I 5 HOH AAA 113 413 170 HOH HOH . I 5 HOH AAA 114 414 157 HOH HOH . I 5 HOH AAA 115 415 69 HOH HOH . I 5 HOH AAA 116 416 82 HOH HOH . I 5 HOH AAA 117 417 26 HOH HOH . I 5 HOH AAA 118 418 25 HOH HOH . I 5 HOH AAA 119 419 98 HOH HOH . I 5 HOH AAA 120 420 53 HOH HOH . I 5 HOH AAA 121 421 164 HOH HOH . I 5 HOH AAA 122 422 79 HOH HOH . I 5 HOH AAA 123 423 146 HOH HOH . I 5 HOH AAA 124 424 132 HOH HOH . I 5 HOH AAA 125 425 101 HOH HOH . I 5 HOH AAA 126 426 61 HOH HOH . I 5 HOH AAA 127 427 167 HOH HOH . I 5 HOH AAA 128 428 81 HOH HOH . I 5 HOH AAA 129 429 178 HOH HOH . I 5 HOH AAA 130 430 31 HOH HOH . I 5 HOH AAA 131 431 100 HOH HOH . I 5 HOH AAA 132 432 176 HOH HOH . I 5 HOH AAA 133 433 103 HOH HOH . I 5 HOH AAA 134 434 28 HOH HOH . I 5 HOH AAA 135 435 107 HOH HOH . I 5 HOH AAA 136 436 121 HOH HOH . I 5 HOH AAA 137 437 181 HOH HOH . I 5 HOH AAA 138 438 104 HOH HOH . I 5 HOH AAA 139 439 161 HOH HOH . I 5 HOH AAA 140 440 172 HOH HOH . I 5 HOH AAA 141 441 78 HOH HOH . I 5 HOH AAA 142 442 182 HOH HOH . I 5 HOH AAA 143 443 142 HOH HOH . I 5 HOH AAA 144 444 115 HOH HOH . I 5 HOH AAA 145 445 73 HOH HOH . I 5 HOH AAA 146 446 119 HOH HOH . I 5 HOH AAA 147 447 36 HOH HOH . I 5 HOH AAA 148 448 124 HOH HOH . I 5 HOH AAA 149 449 91 HOH HOH . I 5 HOH AAA 150 450 86 HOH HOH . I 5 HOH AAA 151 451 58 HOH HOH . I 5 HOH AAA 152 452 179 HOH HOH . I 5 HOH AAA 153 453 169 HOH HOH . I 5 HOH AAA 154 454 138 HOH HOH . I 5 HOH AAA 155 455 177 HOH HOH . I 5 HOH AAA 156 456 125 HOH HOH . I 5 HOH AAA 157 457 133 HOH HOH . I 5 HOH AAA 158 458 145 HOH HOH . I 5 HOH AAA 159 459 77 HOH HOH . I 5 HOH AAA 160 460 186 HOH HOH . I 5 HOH AAA 161 461 68 HOH HOH . I 5 HOH AAA 162 462 40 HOH HOH . I 5 HOH AAA 163 463 171 HOH HOH . I 5 HOH AAA 164 464 80 HOH HOH . I 5 HOH AAA 165 465 48 HOH HOH . I 5 HOH AAA 166 466 122 HOH HOH . I 5 HOH AAA 167 467 111 HOH HOH . I 5 HOH AAA 168 468 153 HOH HOH . I 5 HOH AAA 169 469 140 HOH HOH . I 5 HOH AAA 170 470 137 HOH HOH . I 5 HOH AAA 171 471 136 HOH HOH . I 5 HOH AAA 172 472 154 HOH HOH . I 5 HOH AAA 173 473 141 HOH HOH . I 5 HOH AAA 174 474 49 HOH HOH . I 5 HOH AAA 175 475 52 HOH HOH . I 5 HOH AAA 176 476 159 HOH HOH . I 5 HOH AAA 177 477 116 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x -7.099 _atom_site.Cartn_y -13.481 _atom_site.Cartn_z 12.891 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 20.01 _atom_site.pdbx_formal_charge 0 _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 201 _atom_site.auth_asym_id AAA _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #