data_8PHW
#
_model_server_result.job_id            lh22R_hnQy92zgMP2Mr0bQ 
_model_server_result.datetime_utc      '2024-11-17 20:42:55' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8phw 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":301}' 
#
_entry.id    8PHW 
#
_exptl.entry_id    8PHW 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              486.726 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CHOLESTEROL HEMISUCCINATE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8PHW 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8PHW 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 430 A CYS 430 1_555 A SG CYS 530 A CYS 530 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf2 A SG CYS 465 A CYS 465 1_555 A SG CYS 485 A CYS 485 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf3 A SG CYS 474 A CYS 474 1_555 A SG CYS 524 A CYS 524 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf4 A SG CYS 599 A CYS 599 1_555 A SG CYS 613 A CYS 613 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf5 B SG CYS 25 H CYS 25 1_555 B SG CYS 99 H CYS 99 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
disulf ? disulf6 C SG CYS 24 L CYS 24 1_555 C SG CYS 89 L CYS 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
#
_chem_comp.formula           'C31 H50 O4' 
_chem_comp.formula_weight    486.726 
_chem_comp.id                Y01 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CHOLESTEROL HEMISUCCINATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAA CBA Y01 sing 423 n n 
CBA CAB Y01 sing 424 n n 
CBA CAN Y01 sing 425 n n 
CAN CAJ Y01 sing 426 n n 
CAJ CAO Y01 sing 427 n n 
CAO CBB Y01 sing 428 n n 
CBB CAC Y01 sing 429 n n 
CBB CBE Y01 sing 430 n n 
CBE CAP Y01 sing 431 n n 
CBE CBI Y01 sing 432 n n 
CAP CAQ Y01 sing 433 n n 
CAQ CBG Y01 sing 434 n n 
CBG CBI Y01 sing 435 n n 
CBG CBD Y01 sing 436 n n 
CBI CAE Y01 sing 437 n n 
CBI CAU Y01 sing 438 n n 
CAU CAS Y01 sing 439 n n 
CAS CBF Y01 sing 440 n n 
CBF CBD Y01 sing 441 n n 
CBF CBH Y01 sing 442 n n 
CBD CAK Y01 sing 443 n n 
CAK CAI Y01 sing 444 n n 
CAI CAZ Y01 doub 445 n n 
CAZ CAV Y01 sing 446 n n 
CAZ CBH Y01 sing 447 n n 
CAV CBC Y01 sing 448 n n 
CBH CAD Y01 sing 449 n n 
CBH CAT Y01 sing 450 n n 
CAT CAR Y01 sing 451 n n 
CAR CBC Y01 sing 452 n n 
CBC OAW Y01 sing 453 n n 
OAW CAY Y01 sing 454 n n 
CAY OAG Y01 doub 455 n n 
CAY CAM Y01 sing 456 n n 
CAM CAL Y01 sing 457 n n 
CAL CAX Y01 sing 458 n n 
CAX OAH Y01 sing 459 n n 
CAX OAF Y01 doub 460 n n 
CAA HAA1 Y01 sing 461 n n 
CAA HAA2 Y01 sing 462 n n 
CAA HAA3 Y01 sing 463 n n 
CBA HBA Y01 sing 464 n n 
CAB HAB1 Y01 sing 465 n n 
CAB HAB2 Y01 sing 466 n n 
CAB HAB3 Y01 sing 467 n n 
CAN HAN1 Y01 sing 468 n n 
CAN HAN2 Y01 sing 469 n n 
CAJ HAJ1 Y01 sing 470 n n 
CAJ HAJ2 Y01 sing 471 n n 
CAO HAO1 Y01 sing 472 n n 
CAO HAO2 Y01 sing 473 n n 
CBB HBB Y01 sing 474 n n 
CAC HAC1 Y01 sing 475 n n 
CAC HAC2 Y01 sing 476 n n 
CAC HAC3 Y01 sing 477 n n 
CBE HBE Y01 sing 478 n n 
CAP HAP1 Y01 sing 479 n n 
CAP HAP2 Y01 sing 480 n n 
CAQ HAQ1 Y01 sing 481 n n 
CAQ HAQ2 Y01 sing 482 n n 
CBG HBG Y01 sing 483 n n 
CBD HBD Y01 sing 484 n n 
CAE HAE1 Y01 sing 485 n n 
CAE HAE2 Y01 sing 486 n n 
CAE HAE3 Y01 sing 487 n n 
CAU HAU1 Y01 sing 488 n n 
CAU HAU2 Y01 sing 489 n n 
CAS HAS1 Y01 sing 490 n n 
CAS HAS2 Y01 sing 491 n n 
CBF HBF Y01 sing 492 n n 
CAK HAK1 Y01 sing 493 n n 
CAK HAK2 Y01 sing 494 n n 
CAI HAI Y01 sing 495 n n 
CAV HAV1 Y01 sing 496 n n 
CAV HAV2 Y01 sing 497 n n 
CBC HBC Y01 sing 498 n n 
CAD HAD1 Y01 sing 499 n n 
CAD HAD2 Y01 sing 500 n n 
CAD HAD3 Y01 sing 501 n n 
CAT HAT1 Y01 sing 502 n n 
CAT HAT2 Y01 sing 503 n n 
CAR HAR1 Y01 sing 504 n n 
CAR HAR2 Y01 sing 505 n n 
CAM HAM1 Y01 sing 506 n n 
CAM HAM2 Y01 sing 507 n n 
CAL HAL1 Y01 sing 508 n n 
CAL HAL2 Y01 sing 509 n n 
OAH HAH Y01 sing 510 n n 
#
_atom_sites.entry_id                     8PHW 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 FY5 A 1 701 2 FY5 FY5 . 
E 5 Y01 H 1 301 1 Y01 Y01 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CAA Y01 . . . E 5 139.017 138.724 136.453 1 30 ? CAA Y01 301 H 1 
HETATM 2 C CBA Y01 . . . E 5 137.715 138.378 135.749 1 30 ? CBA Y01 301 H 1 
HETATM 3 C CAB Y01 . . . E 5 136.612 138.119 136.764 1 30 ? CAB Y01 301 H 1 
HETATM 4 C CAN Y01 . . . E 5 137.892 137.19 134.803 1 30 ? CAN Y01 301 H 1 
HETATM 5 C CAJ Y01 . . . E 5 138.347 135.904 135.449 1 30 ? CAJ Y01 301 H 1 
HETATM 6 C CAO Y01 . . . E 5 138.487 134.767 134.468 1 30 ? CAO Y01 301 H 1 
HETATM 7 C CBB Y01 . . . E 5 138.953 133.433 135.07 1 30 ? CBB Y01 301 H 1 
HETATM 8 C CAC Y01 . . . E 5 137.982 132.966 136.15 1 30 ? CAC Y01 301 H 1 
HETATM 9 C CBE Y01 . . . E 5 139.154 132.391 133.955 1 30 ? CBE Y01 301 H 1 
HETATM 10 C CAP Y01 . . . E 5 140.23 132.815 132.917 1 30 ? CAP Y01 301 H 1 
HETATM 11 C CAQ Y01 . . . E 5 140.94 131.522 132.47 1 30 ? CAQ Y01 301 H 1 
HETATM 12 C CBG Y01 . . . E 5 139.97 130.432 132.911 1 30 ? CBG Y01 301 H 1 
HETATM 13 C CBI Y01 . . . E 5 139.523 130.918 134.304 1 30 ? CBI Y01 301 H 1 
HETATM 14 C CAE Y01 . . . E 5 140.673 130.887 135.324 1 30 ? CAE Y01 301 H 1 
HETATM 15 C CAU Y01 . . . E 5 138.372 130.011 134.75 1 30 ? CAU Y01 301 H 1 
HETATM 16 C CAS Y01 . . . E 5 138.785 128.535 134.743 1 30 ? CAS Y01 301 H 1 
HETATM 17 C CBF Y01 . . . E 5 139.299 128.063 133.374 1 30 ? CBF Y01 301 H 1 
HETATM 18 C CBD Y01 . . . E 5 140.417 128.978 132.841 1 30 ? CBD Y01 301 H 1 
HETATM 19 C CAK Y01 . . . E 5 140.762 128.596 131.404 1 30 ? CAK Y01 301 H 1 
HETATM 20 C CAI Y01 . . . E 5 140.798 127.117 131.185 1 30 ? CAI Y01 301 H 1 
HETATM 21 C CAZ Y01 . . . E 5 140.386 126.207 132.055 1 30 ? CAZ Y01 301 H 1 
HETATM 22 C CAV Y01 . . . E 5 140.549 124.73 131.764 1 30 ? CAV Y01 301 H 1 
HETATM 23 C CBH Y01 . . . E 5 139.7 126.561 133.371 1 30 ? CBH Y01 301 H 1 
HETATM 24 C CAD Y01 . . . E 5 140.67 126.223 134.519 1 30 ? CAD Y01 301 H 1 
HETATM 25 C CAT Y01 . . . E 5 138.419 125.704 133.503 1 30 ? CAT Y01 301 H 1 
HETATM 26 C CAR Y01 . . . E 5 138.633 124.216 133.218 1 30 ? CAR Y01 301 H 1 
HETATM 27 C CBC Y01 . . . E 5 139.225 124.013 131.851 1 30 ? CBC Y01 301 H 1 
HETATM 28 O OAW Y01 . . . E 5 139.464 122.593 131.626 1 30 ? OAW Y01 301 H 1 
HETATM 29 C CAY Y01 . . . E 5 140.255 121.948 132.475 1 30 ? CAY Y01 301 H 1 
HETATM 30 O OAG Y01 . . . E 5 140.816 122.474 133.392 1 30 ? OAG Y01 301 H 1 
HETATM 31 C CAM Y01 . . . E 5 140.356 120.484 132.147 1 30 ? CAM Y01 301 H 1 
HETATM 32 C CAL Y01 . . . E 5 139.824 119.526 133.195 1 30 ? CAL Y01 301 H 1 
HETATM 33 C CAX Y01 . . . E 5 139.893 118.059 132.81 1 30 ? CAX Y01 301 H 1 
HETATM 34 O OAH Y01 . . . E 5 140.375 117.763 131.698 1 30 ? OAH Y01 301 H 1 
HETATM 35 O OAF Y01 . . . E 5 139.464 117.215 133.621 1 30 ? OAF Y01 301 H 1 
#
_model_server_stats.io_time_ms              60 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           356 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           35 
#