data_8PI0
#
_model_server_result.job_id            SFDNCnkuZR7WzAEQEaSBvg 
_model_server_result.datetime_utc      '2024-10-11 08:30:50' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8pi0 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":201}' 
#
_entry.id    8PI0 
#
_exptl.entry_id    8PI0 
_exptl.method      'SOLUTION NMR' 
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_entity.details                     ? 
_entity.formula_weight              215.251 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (5~{S})-5-(1~{H}-indol-2-yl)piperazin-2-one 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
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_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C12 H13 N3 O' 
_chem_comp.formula_weight    215.251 
_chem_comp.id                YVW 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (5~{S})-5-(1~{H}-indol-2-yl)piperazin-2-one 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
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loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O C YVW doub 346 n n 
C2 C YVW sing 347 n n 
C2 N YVW sing 348 n n 
C N2 YVW sing 349 n n 
N2 C4 YVW sing 350 n n 
N C3 YVW sing 351 n n 
C3 C4 YVW sing 352 n n 
C3 C5 YVW sing 353 n n 
C6 C5 YVW doub 354 n y 
C6 C7 YVW sing 355 n y 
C5 N3 YVW sing 356 n y 
C7 C8 YVW doub 357 n y 
C7 C12 YVW sing 358 n y 
N3 C12 YVW sing 359 n y 
C8 C9 YVW sing 360 n y 
C12 C11 YVW doub 361 n y 
C9 C10 YVW doub 362 n y 
C11 C10 YVW sing 363 n y 
N3 H13 YVW sing 364 n n 
C4 H7 YVW sing 365 n n 
C4 H8 YVW sing 366 n n 
C6 H5 YVW sing 367 n n 
C8 H4 YVW sing 368 n n 
C10 H2 YVW sing 369 n n 
N2 H77 YVW sing 370 n n 
C2 H9 YVW sing 371 n n 
C2 H10 YVW sing 372 n n 
N H33 YVW sing 373 n n 
C3 H6 YVW sing 374 n n 
C9 H3 YVW sing 375 n n 
C11 H1 YVW sing 376 n n 
#
_atom_sites.entry_id                     8PI0 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
_pdbx_nonpoly_scheme.asym_id          B 
_pdbx_nonpoly_scheme.entity_id        2 
_pdbx_nonpoly_scheme.mon_id           YVW 
_pdbx_nonpoly_scheme.pdb_strand_id    A 
_pdbx_nonpoly_scheme.ndb_seq_num      1 
_pdbx_nonpoly_scheme.pdb_seq_num      201 
_pdbx_nonpoly_scheme.auth_seq_num     169 
_pdbx_nonpoly_scheme.pdb_mon_id       YVW 
_pdbx_nonpoly_scheme.auth_mon_id      LIG 
_pdbx_nonpoly_scheme.pdb_ins_code     . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N3 YVW . . . B 2 -9.346 -1.485 -8.575 1 0 ? N3 YVW 201 A 1 
HETATM 2 C C4 YVW . . . B 2 -11.246 -3.207 -10.344 1 0 ? C4 YVW 201 A 1 
HETATM 3 C C5 YVW . . . B 2 -9.956 -1.17 -9.712 1 0 ? C5 YVW 201 A 1 
HETATM 4 C C6 YVW . . . B 2 -10.267 0.123 -9.743 1 0 ? C6 YVW 201 A 1 
HETATM 5 C C7 YVW . . . B 2 -9.843 0.652 -8.598 1 0 ? C7 YVW 201 A 1 
HETATM 6 C C8 YVW . . . B 2 -9.896 1.939 -8.088 1 0 ? C8 YVW 201 A 1 
HETATM 7 C C10 YVW . . . B 2 -8.773 1.195 -6.093 1 0 ? C10 YVW 201 A 1 
HETATM 8 O O YVW . . . B 2 -10.627 -5.416 -13.151 1 0 ? O YVW 201 A 1 
HETATM 9 C C YVW . . . B 2 -10.474 -4.486 -12.359 1 0 ? C YVW 201 A 1 
HETATM 10 N N2 YVW . . . B 2 -11.407 -4.304 -11.33 1 0 ? N2 YVW 201 A 1 
HETATM 11 C C2 YVW . . . B 2 -9.271 -3.556 -12.511 1 0 ? C2 YVW 201 A 1 
HETATM 12 N N YVW . . . B 2 -9.014 -2.827 -11.261 1 0 ? N YVW 201 A 1 
HETATM 13 C C3 YVW . . . B 2 -10.254 -2.16 -10.841 1 0 ? C3 YVW 201 A 1 
HETATM 14 C C9 YVW . . . B 2 -9.357 2.214 -6.836 1 0 ? C9 YVW 201 A 1 
HETATM 15 C C11 YVW . . . B 2 -8.724 -0.099 -6.605 1 0 ? C11 YVW 201 A 1 
HETATM 16 C C12 YVW . . . B 2 -9.263 -0.368 -7.856 1 0 ? C12 YVW 201 A 1 
HETATM 17 H H13 YVW . . . B 2 -9.013 -2.39 -8.31 1 0 ? H13 YVW 201 A 1 
HETATM 18 H H7 YVW . . . B 2 -10.957 -3.659 -9.389 1 0 ? H7 YVW 201 A 1 
HETATM 19 H H8 YVW . . . B 2 -12.239 -2.76 -10.216 1 0 ? H8 YVW 201 A 1 
HETATM 20 H H5 YVW . . . B 2 -10.755 0.637 -10.561 1 0 ? H5 YVW 201 A 1 
HETATM 21 H H4 YVW . . . B 2 -10.358 2.735 -8.663 1 0 ? H4 YVW 201 A 1 
HETATM 22 H H2 YVW . . . B 2 -8.35 1.408 -5.114 1 0 ? H2 YVW 201 A 1 
HETATM 23 H H77 YVW . . . B 2 -12.334 -4.655 -11.542 1 0 ? H77 YVW 201 A 1 
HETATM 24 H H9 YVW . . . B 2 -9.489 -2.831 -13.303 1 0 ? H9 YVW 201 A 1 
HETATM 25 H H10 YVW . . . B 2 -8.381 -4.114 -12.819 1 0 ? H10 YVW 201 A 1 
HETATM 26 H H33 YVW . . . B 2 -8.306 -2.136 -11.41 1 0 ? H33 YVW 201 A 1 
HETATM 27 H H6 YVW . . . B 2 -10.62 -1.565 -11.689 1 0 ? H6 YVW 201 A 1 
HETATM 28 H H3 YVW . . . B 2 -9.393 3.226 -6.44 1 0 ? H3 YVW 201 A 1 
HETATM 29 H H1 YVW . . . B 2 -8.263 -0.89 -6.022 1 0 ? H1 YVW 201 A 1 
#
_model_server_stats.io_time_ms              118 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           1199 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           29 
#