data_8PIW # _model_server_result.job_id Cmw887xq4c0JQIkQSOJCZQ _model_server_result.datetime_utc '2024-11-15 08:38:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8piw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":209}' # _entry.id 8PIW # _exptl.entry_id 8PIW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8PIW _cell.length_a 77.521 _cell.length_b 77.521 _cell.length_c 37.793 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8PIW _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall 'P 4nw 2abw' _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id J _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 24 A CYS 6 1_555 A SG CYS 145 A CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 A SG CYS 48 A CYS 30 1_555 A SG CYS 133 A CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf3 A SG CYS 82 A CYS 64 1_555 A SG CYS 98 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? disulf ? disulf4 A SG CYS 94 A CYS 76 1_555 A SG CYS 112 A CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? metalc ? metalc1 A O SER 78 A SER 60 1_555 J NA NA . A NA 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? metalc ? metalc2 A O CYS 82 A CYS 64 1_555 J NA NA . A NA 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.46 ? metalc ? metalc3 A OG SER 90 A SER 72 1_555 J NA NA . A NA 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.541 ? metalc ? metalc4 A O ARG 91 A ARG 73 1_555 J NA NA . A NA 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.541 ? metalc ? metalc5 A OD1 ASP 119 A ASP 101 1_555 B TB TB . A TB 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.532 ? metalc ? metalc6 A OD2 ASP 119 A ASP 101 1_555 B TB TB . A TB 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? metalc ? metalc7 B TB TB . A TB 201 1_555 C N1 ZHT . A ZHT 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.767 ? metalc ? metalc8 B TB TB . A TB 201 1_555 C O3 ZHT . A ZHT 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.38 ? metalc ? metalc9 B TB TB . A TB 201 1_555 C O1 ZHT . A ZHT 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? metalc ? metalc10 B TB TB . A TB 201 1_555 C N5 ZHT . A ZHT 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.272 ? metalc ? metalc11 B TB TB . A TB 201 1_555 C N2 ZHT . A ZHT 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.844 ? metalc ? metalc12 B TB TB . A TB 201 1_555 C N4 ZHT . A ZHT 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.744 ? metalc ? metalc13 B TB TB . A TB 201 1_555 C N3 ZHT . A ZHT 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.314 ? metalc ? metalc14 J NA NA . A NA 209 1_555 K O HOH . A HOH 373 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.403 ? metalc ? metalc15 J NA NA . A NA 209 1_555 K O HOH . A HOH 384 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.402 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8PIW _atom_sites.fract_transf_matrix[1][1] 0.0129 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.0129 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02646 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TB A 1 201 1 TB TB . C 3 ZHT A 1 202 1 ZHT TAC . D 4 CL A 1 203 1 CL CL . E 4 CL A 1 204 2 CL CL . F 4 CL A 1 205 3 CL CL . G 4 CL A 1 206 4 CL CL . H 4 CL A 1 207 5 CL CL . I 4 CL A 1 208 6 CL CL . J 5 NA A 1 209 1 NA NA . K 6 HOH A 1 301 101 HOH HOH . K 6 HOH A 2 302 60 HOH HOH . K 6 HOH A 3 303 5 HOH HOH . K 6 HOH A 4 304 70 HOH HOH . K 6 HOH A 5 305 126 HOH HOH . K 6 HOH A 6 306 104 HOH HOH . K 6 HOH A 7 307 98 HOH HOH . K 6 HOH A 8 308 69 HOH HOH . K 6 HOH A 9 309 58 HOH HOH . K 6 HOH A 10 310 79 HOH HOH . K 6 HOH A 11 311 67 HOH HOH . K 6 HOH A 12 312 102 HOH HOH . K 6 HOH A 13 313 50 HOH HOH . K 6 HOH A 14 314 27 HOH HOH . K 6 HOH A 15 315 100 HOH HOH . K 6 HOH A 16 316 29 HOH HOH . K 6 HOH A 17 317 84 HOH HOH . K 6 HOH A 18 318 78 HOH HOH . K 6 HOH A 19 319 44 HOH HOH . K 6 HOH A 20 320 62 HOH HOH . K 6 HOH A 21 321 90 HOH HOH . K 6 HOH A 22 322 131 HOH HOH . K 6 HOH A 23 323 32 HOH HOH . K 6 HOH A 24 324 19 HOH HOH . K 6 HOH A 25 325 119 HOH HOH . K 6 HOH A 26 326 26 HOH HOH . K 6 HOH A 27 327 118 HOH HOH . K 6 HOH A 28 328 33 HOH HOH . K 6 HOH A 29 329 1 HOH HOH . K 6 HOH A 30 330 41 HOH HOH . K 6 HOH A 31 331 3 HOH HOH . K 6 HOH A 32 332 20 HOH HOH . K 6 HOH A 33 333 76 HOH HOH . K 6 HOH A 34 334 31 HOH HOH . K 6 HOH A 35 335 8 HOH HOH . K 6 HOH A 36 336 7 HOH HOH . K 6 HOH A 37 337 18 HOH HOH . K 6 HOH A 38 338 56 HOH HOH . K 6 HOH A 39 339 61 HOH HOH . K 6 HOH A 40 340 43 HOH HOH . K 6 HOH A 41 341 52 HOH HOH . K 6 HOH A 42 342 73 HOH HOH . K 6 HOH A 43 343 21 HOH HOH . K 6 HOH A 44 344 30 HOH HOH . K 6 HOH A 45 345 108 HOH HOH . K 6 HOH A 46 346 54 HOH HOH . K 6 HOH A 47 347 25 HOH HOH . K 6 HOH A 48 348 94 HOH HOH . K 6 HOH A 49 349 35 HOH HOH . K 6 HOH A 50 350 113 HOH HOH . K 6 HOH A 51 351 28 HOH HOH . K 6 HOH A 52 352 81 HOH HOH . K 6 HOH A 53 353 34 HOH HOH . K 6 HOH A 54 354 103 HOH HOH . K 6 HOH A 55 355 37 HOH HOH . K 6 HOH A 56 356 95 HOH HOH . K 6 HOH A 57 357 16 HOH HOH . K 6 HOH A 58 358 46 HOH HOH . K 6 HOH A 59 359 38 HOH HOH . K 6 HOH A 60 360 24 HOH HOH . K 6 HOH A 61 361 65 HOH HOH . K 6 HOH A 62 362 4 HOH HOH . K 6 HOH A 63 363 83 HOH HOH . K 6 HOH A 64 364 39 HOH HOH . K 6 HOH A 65 365 23 HOH HOH . K 6 HOH A 66 366 82 HOH HOH . K 6 HOH A 67 367 11 HOH HOH . K 6 HOH A 68 368 10 HOH HOH . K 6 HOH A 69 369 124 HOH HOH . K 6 HOH A 70 370 66 HOH HOH . K 6 HOH A 71 371 77 HOH HOH . K 6 HOH A 72 372 128 HOH HOH . K 6 HOH A 73 373 6 HOH HOH . K 6 HOH A 74 374 72 HOH HOH . K 6 HOH A 75 375 80 HOH HOH . K 6 HOH A 76 376 57 HOH HOH . K 6 HOH A 77 377 117 HOH HOH . K 6 HOH A 78 378 71 HOH HOH . K 6 HOH A 79 379 12 HOH HOH . K 6 HOH A 80 380 47 HOH HOH . K 6 HOH A 81 381 51 HOH HOH . K 6 HOH A 82 382 15 HOH HOH . K 6 HOH A 83 383 75 HOH HOH . K 6 HOH A 84 384 42 HOH HOH . K 6 HOH A 85 385 17 HOH HOH . K 6 HOH A 86 386 53 HOH HOH . K 6 HOH A 87 387 112 HOH HOH . K 6 HOH A 88 388 13 HOH HOH . K 6 HOH A 89 389 130 HOH HOH . K 6 HOH A 90 390 63 HOH HOH . K 6 HOH A 91 391 109 HOH HOH . K 6 HOH A 92 392 111 HOH HOH . K 6 HOH A 93 393 14 HOH HOH . K 6 HOH A 94 394 2 HOH HOH . K 6 HOH A 95 395 99 HOH HOH . K 6 HOH A 96 396 22 HOH HOH . K 6 HOH A 97 397 86 HOH HOH . K 6 HOH A 98 398 129 HOH HOH . K 6 HOH A 99 399 68 HOH HOH . K 6 HOH A 100 400 107 HOH HOH . K 6 HOH A 101 401 96 HOH HOH . K 6 HOH A 102 402 9 HOH HOH . K 6 HOH A 103 403 133 HOH HOH . K 6 HOH A 104 404 120 HOH HOH . K 6 HOH A 105 405 106 HOH HOH . K 6 HOH A 106 406 134 HOH HOH . K 6 HOH A 107 407 36 HOH HOH . K 6 HOH A 108 408 92 HOH HOH . K 6 HOH A 109 409 91 HOH HOH . K 6 HOH A 110 410 59 HOH HOH . K 6 HOH A 111 411 110 HOH HOH . K 6 HOH A 112 412 105 HOH HOH . K 6 HOH A 113 413 85 HOH HOH . K 6 HOH A 114 414 89 HOH HOH . K 6 HOH A 115 415 87 HOH HOH . K 6 HOH A 116 416 48 HOH HOH . K 6 HOH A 117 417 121 HOH HOH . K 6 HOH A 118 418 93 HOH HOH . K 6 HOH A 119 419 125 HOH HOH . K 6 HOH A 120 420 40 HOH HOH . K 6 HOH A 121 421 115 HOH HOH . K 6 HOH A 122 422 122 HOH HOH . K 6 HOH A 123 423 49 HOH HOH . K 6 HOH A 124 424 74 HOH HOH . K 6 HOH A 125 425 127 HOH HOH . K 6 HOH A 126 426 45 HOH HOH . K 6 HOH A 127 427 88 HOH HOH . K 6 HOH A 128 428 114 HOH HOH . K 6 HOH A 129 429 55 HOH HOH . K 6 HOH A 130 430 132 HOH HOH . K 6 HOH A 131 431 64 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id J _atom_site.label_entity_id 5 _atom_site.Cartn_x -7.394 _atom_site.Cartn_y -13.521 _atom_site.Cartn_z 12.844 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 25.68 _atom_site.pdbx_formal_charge 1 _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 209 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 30 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #