data_8PJ7 # _model_server_result.job_id xAX--3kewf75d32XbMAZqw _model_server_result.datetime_utc '2024-10-19 15:49:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8pj7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":203}' # _entry.id 8PJ7 # _exptl.entry_id 8PJ7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8PJ7 _cell.length_a 49.632 _cell.length_b 49.632 _cell.length_c 122.439 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8PJ7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 G N N ? 3 H N N ? 3 I N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 92 n n C1 C2 EDO sing 93 n n C1 H11 EDO sing 94 n n C1 H12 EDO sing 95 n n O1 HO1 EDO sing 96 n n C2 O2 EDO sing 97 n n C2 H21 EDO sing 98 n n C2 H22 EDO sing 99 n n O2 HO2 EDO sing 100 n n # _atom_sites.entry_id 8PJ7 _atom_sites.fract_transf_matrix[1][1] 0.020148 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020148 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008167 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZJ9 A 1 201 201 ZJ9 DRG . C 3 EDO A 1 202 301 EDO EDO . D 3 EDO A 1 203 401 EDO EDO . E 3 EDO A 1 204 501 EDO EDO . F 4 DMS A 1 205 601 DMS DMS . G 3 EDO A 1 206 701 EDO EDO . H 3 EDO A 1 207 801 EDO EDO . I 3 EDO A 1 208 901 EDO EDO . J 5 PO4 A 1 209 1 PO4 PO4 . K 6 HOH A 1 301 104 HOH HOH . K 6 HOH A 2 302 17 HOH HOH . K 6 HOH A 3 303 70 HOH HOH . K 6 HOH A 4 304 33 HOH HOH . K 6 HOH A 5 305 56 HOH HOH . K 6 HOH A 6 306 102 HOH HOH . K 6 HOH A 7 307 65 HOH HOH . K 6 HOH A 8 308 10 HOH HOH . K 6 HOH A 9 309 66 HOH HOH . K 6 HOH A 10 310 82 HOH HOH . K 6 HOH A 11 311 83 HOH HOH . K 6 HOH A 12 312 67 HOH HOH . K 6 HOH A 13 313 110 HOH HOH . K 6 HOH A 14 314 57 HOH HOH . K 6 HOH A 15 315 101 HOH HOH . K 6 HOH A 16 316 96 HOH HOH . K 6 HOH A 17 317 58 HOH HOH . K 6 HOH A 18 318 87 HOH HOH . K 6 HOH A 19 319 45 HOH HOH . K 6 HOH A 20 320 113 HOH HOH . K 6 HOH A 21 321 43 HOH HOH . K 6 HOH A 22 322 42 HOH HOH . K 6 HOH A 23 323 11 HOH HOH . K 6 HOH A 24 324 4 HOH HOH . K 6 HOH A 25 325 46 HOH HOH . K 6 HOH A 26 326 103 HOH HOH . K 6 HOH A 27 327 72 HOH HOH . K 6 HOH A 28 328 55 HOH HOH . K 6 HOH A 29 329 6 HOH HOH . K 6 HOH A 30 330 68 HOH HOH . K 6 HOH A 31 331 77 HOH HOH . K 6 HOH A 32 332 63 HOH HOH . K 6 HOH A 33 333 12 HOH HOH . K 6 HOH A 34 334 48 HOH HOH . K 6 HOH A 35 335 59 HOH HOH . K 6 HOH A 36 336 15 HOH HOH . K 6 HOH A 37 337 41 HOH HOH . K 6 HOH A 38 338 106 HOH HOH . K 6 HOH A 39 339 36 HOH HOH . K 6 HOH A 40 340 31 HOH HOH . K 6 HOH A 41 341 62 HOH HOH . K 6 HOH A 42 342 99 HOH HOH . K 6 HOH A 43 343 89 HOH HOH . K 6 HOH A 44 344 22 HOH HOH . K 6 HOH A 45 345 9 HOH HOH . K 6 HOH A 46 346 37 HOH HOH . K 6 HOH A 47 347 28 HOH HOH . K 6 HOH A 48 348 20 HOH HOH . K 6 HOH A 49 349 107 HOH HOH . K 6 HOH A 50 350 19 HOH HOH . K 6 HOH A 51 351 32 HOH HOH . K 6 HOH A 52 352 50 HOH HOH . K 6 HOH A 53 353 29 HOH HOH . K 6 HOH A 54 354 13 HOH HOH . K 6 HOH A 55 355 34 HOH HOH . K 6 HOH A 56 356 90 HOH HOH . K 6 HOH A 57 357 44 HOH HOH . K 6 HOH A 58 358 60 HOH HOH . K 6 HOH A 59 359 2 HOH HOH . K 6 HOH A 60 360 98 HOH HOH . K 6 HOH A 61 361 7 HOH HOH . K 6 HOH A 62 362 47 HOH HOH . K 6 HOH A 63 363 14 HOH HOH . K 6 HOH A 64 364 112 HOH HOH . K 6 HOH A 65 365 80 HOH HOH . K 6 HOH A 66 366 25 HOH HOH . K 6 HOH A 67 367 30 HOH HOH . K 6 HOH A 68 368 108 HOH HOH . K 6 HOH A 69 369 105 HOH HOH . K 6 HOH A 70 370 100 HOH HOH . K 6 HOH A 71 371 69 HOH HOH . K 6 HOH A 72 372 111 HOH HOH . K 6 HOH A 73 373 114 HOH HOH . K 6 HOH A 74 374 35 HOH HOH . K 6 HOH A 75 375 95 HOH HOH . K 6 HOH A 76 376 21 HOH HOH . K 6 HOH A 77 377 16 HOH HOH . K 6 HOH A 78 378 81 HOH HOH . K 6 HOH A 79 379 38 HOH HOH . K 6 HOH A 80 380 8 HOH HOH . K 6 HOH A 81 381 5 HOH HOH . K 6 HOH A 82 382 109 HOH HOH . K 6 HOH A 83 383 79 HOH HOH . K 6 HOH A 84 384 39 HOH HOH . K 6 HOH A 85 385 18 HOH HOH . K 6 HOH A 86 386 23 HOH HOH . K 6 HOH A 87 387 94 HOH HOH . K 6 HOH A 88 388 71 HOH HOH . K 6 HOH A 89 389 52 HOH HOH . K 6 HOH A 90 390 53 HOH HOH . K 6 HOH A 91 391 51 HOH HOH . K 6 HOH A 92 392 24 HOH HOH . K 6 HOH A 93 393 40 HOH HOH . K 6 HOH A 94 394 26 HOH HOH . K 6 HOH A 95 395 115 HOH HOH . K 6 HOH A 96 396 49 HOH HOH . K 6 HOH A 97 397 73 HOH HOH . K 6 HOH A 98 398 85 HOH HOH . K 6 HOH A 99 399 88 HOH HOH . K 6 HOH A 100 400 75 HOH HOH . K 6 HOH A 101 401 86 HOH HOH . K 6 HOH A 102 402 61 HOH HOH . K 6 HOH A 103 403 84 HOH HOH . K 6 HOH A 104 404 92 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . D 3 -4.3 -7.111 -23.246 1 30.58 ? C1 EDO 203 A 1 HETATM 2 O O1 EDO . . . D 3 -4.866 -6.818 -21.998 1 27.15 ? O1 EDO 203 A 1 HETATM 3 C C2 EDO . . . D 3 -5.027 -6.434 -24.297 1 32.45 ? C2 EDO 203 A 1 HETATM 4 O O2 EDO . . . D 3 -4.554 -5.159 -24.575 1 28.55 ? O2 EDO 203 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #