data_8PJX # _model_server_result.job_id 5_V4eoiTdq8oDgx8t_s5ZQ _model_server_result.datetime_utc '2024-10-12 12:26:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8pjx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 8PJX # _exptl.entry_id 8PJX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8PJX _cell.length_a 68.032 _cell.length_b 68.032 _cell.length_c 117.857 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8PJX _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall 'P 4nw 2abw' _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLU 29 A GLU 29 1_555 B CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.501 ? metalc ? metalc2 A OE2 GLU 29 A GLU 29 1_555 B CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.429 ? metalc ? metalc3 A OE1 GLU 123 A GLU 123 1_555 C CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.144 ? metalc ? metalc4 A OE2 GLU 123 A GLU 123 1_555 C CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.47 ? metalc ? metalc5 A OE1 GLU 217 A GLU 217 1_555 D CA CA . A CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.566 ? metalc ? metalc6 A OE2 GLU 217 A GLU 217 1_555 D CA CA . A CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.426 ? metalc ? metalc7 B CA CA . A CA 301 1_555 E O HOH . A HOH 556 7_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.285 ? metalc ? metalc8 C CA CA . A CA 302 1_555 E O HOH . A HOH 426 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.929 ? metalc ? metalc9 C CA CA . A CA 302 1_555 E O HOH . A HOH 429 7_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.576 ? metalc ? metalc10 C CA CA . A CA 302 1_555 E O HOH . A HOH 473 7_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? metalc ? metalc11 C CA CA . A CA 302 1_555 E O HOH . A HOH 549 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.692 ? metalc ? metalc12 D CA CA . A CA 303 1_555 E O HOH . A HOH 422 7_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.542 ? metalc ? metalc13 D CA CA . A CA 303 1_555 E O HOH . A HOH 506 7_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.243 ? metalc ? metalc14 D CA CA . A CA 303 1_555 E O HOH . A HOH 554 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.508 ? metalc ? metalc15 D CA CA . A CA 303 1_555 E O HOH . A HOH 573 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.739 ? metalc ? metalc16 D CA CA . A CA 303 1_555 E O HOH . A HOH 591 7_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.396 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8PJX _atom_sites.fract_transf_matrix[1][1] 0.014699 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014699 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008485 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 301 1 CA CA . C 2 CA A 1 302 2 CA CA . D 2 CA A 1 303 3 CA CA . E 3 HOH A 1 401 19 HOH HOH . E 3 HOH A 2 402 59 HOH HOH . E 3 HOH A 3 403 178 HOH HOH . E 3 HOH A 4 404 111 HOH HOH . E 3 HOH A 5 405 151 HOH HOH . E 3 HOH A 6 406 107 HOH HOH . E 3 HOH A 7 407 96 HOH HOH . E 3 HOH A 8 408 67 HOH HOH . E 3 HOH A 9 409 167 HOH HOH . E 3 HOH A 10 410 22 HOH HOH . E 3 HOH A 11 411 100 HOH HOH . E 3 HOH A 12 412 191 HOH HOH . E 3 HOH A 13 413 47 HOH HOH . E 3 HOH A 14 414 31 HOH HOH . E 3 HOH A 15 415 120 HOH HOH . E 3 HOH A 16 416 164 HOH HOH . E 3 HOH A 17 417 200 HOH HOH . E 3 HOH A 18 418 83 HOH HOH . E 3 HOH A 19 419 49 HOH HOH . E 3 HOH A 20 420 159 HOH HOH . E 3 HOH A 21 421 148 HOH HOH . E 3 HOH A 22 422 149 HOH HOH . E 3 HOH A 23 423 53 HOH HOH . E 3 HOH A 24 424 70 HOH HOH . E 3 HOH A 25 425 15 HOH HOH . E 3 HOH A 26 426 76 HOH HOH . E 3 HOH A 27 427 68 HOH HOH . E 3 HOH A 28 428 24 HOH HOH . E 3 HOH A 29 429 40 HOH HOH . E 3 HOH A 30 430 80 HOH HOH . E 3 HOH A 31 431 35 HOH HOH . E 3 HOH A 32 432 95 HOH HOH . E 3 HOH A 33 433 79 HOH HOH . E 3 HOH A 34 434 2 HOH HOH . E 3 HOH A 35 435 88 HOH HOH . E 3 HOH A 36 436 82 HOH HOH . E 3 HOH A 37 437 56 HOH HOH . E 3 HOH A 38 438 119 HOH HOH . E 3 HOH A 39 439 41 HOH HOH . E 3 HOH A 40 440 63 HOH HOH . E 3 HOH A 41 441 103 HOH HOH . E 3 HOH A 42 442 29 HOH HOH . E 3 HOH A 43 443 165 HOH HOH . E 3 HOH A 44 444 23 HOH HOH . E 3 HOH A 45 445 5 HOH HOH . E 3 HOH A 46 446 186 HOH HOH . E 3 HOH A 47 447 146 HOH HOH . E 3 HOH A 48 448 45 HOH HOH . E 3 HOH A 49 449 3 HOH HOH . E 3 HOH A 50 450 38 HOH HOH . E 3 HOH A 51 451 112 HOH HOH . E 3 HOH A 52 452 84 HOH HOH . E 3 HOH A 53 453 116 HOH HOH . E 3 HOH A 54 454 61 HOH HOH . E 3 HOH A 55 455 12 HOH HOH . E 3 HOH A 56 456 99 HOH HOH . E 3 HOH A 57 457 18 HOH HOH . E 3 HOH A 58 458 74 HOH HOH . E 3 HOH A 59 459 86 HOH HOH . E 3 HOH A 60 460 25 HOH HOH . E 3 HOH A 61 461 102 HOH HOH . E 3 HOH A 62 462 131 HOH HOH . E 3 HOH A 63 463 104 HOH HOH . E 3 HOH A 64 464 9 HOH HOH . E 3 HOH A 65 465 71 HOH HOH . E 3 HOH A 66 466 134 HOH HOH . E 3 HOH A 67 467 60 HOH HOH . E 3 HOH A 68 468 162 HOH HOH . E 3 HOH A 69 469 125 HOH HOH . E 3 HOH A 70 470 132 HOH HOH . E 3 HOH A 71 471 8 HOH HOH . E 3 HOH A 72 472 51 HOH HOH . E 3 HOH A 73 473 33 HOH HOH . E 3 HOH A 74 474 129 HOH HOH . E 3 HOH A 75 475 14 HOH HOH . E 3 HOH A 76 476 10 HOH HOH . E 3 HOH A 77 477 110 HOH HOH . E 3 HOH A 78 478 173 HOH HOH . E 3 HOH A 79 479 214 HOH HOH . E 3 HOH A 80 480 207 HOH HOH . E 3 HOH A 81 481 16 HOH HOH . E 3 HOH A 82 482 171 HOH HOH . E 3 HOH A 83 483 210 HOH HOH . E 3 HOH A 84 484 92 HOH HOH . E 3 HOH A 85 485 4 HOH HOH . E 3 HOH A 86 486 218 HOH HOH . E 3 HOH A 87 487 34 HOH HOH . E 3 HOH A 88 488 11 HOH HOH . E 3 HOH A 89 489 209 HOH HOH . E 3 HOH A 90 490 58 HOH HOH . E 3 HOH A 91 491 37 HOH HOH . E 3 HOH A 92 492 215 HOH HOH . E 3 HOH A 93 493 78 HOH HOH . E 3 HOH A 94 494 115 HOH HOH . E 3 HOH A 95 495 81 HOH HOH . E 3 HOH A 96 496 28 HOH HOH . E 3 HOH A 97 497 193 HOH HOH . E 3 HOH A 98 498 169 HOH HOH . E 3 HOH A 99 499 6 HOH HOH . E 3 HOH A 100 500 101 HOH HOH . E 3 HOH A 101 501 26 HOH HOH . E 3 HOH A 102 502 54 HOH HOH . E 3 HOH A 103 503 65 HOH HOH . E 3 HOH A 104 504 156 HOH HOH . E 3 HOH A 105 505 42 HOH HOH . E 3 HOH A 106 506 66 HOH HOH . E 3 HOH A 107 507 121 HOH HOH . E 3 HOH A 108 508 93 HOH HOH . E 3 HOH A 109 509 154 HOH HOH . E 3 HOH A 110 510 62 HOH HOH . E 3 HOH A 111 511 147 HOH HOH . E 3 HOH A 112 512 204 HOH HOH . E 3 HOH A 113 513 150 HOH HOH . E 3 HOH A 114 514 216 HOH HOH . E 3 HOH A 115 515 13 HOH HOH . E 3 HOH A 116 516 118 HOH HOH . E 3 HOH A 117 517 123 HOH HOH . E 3 HOH A 118 518 7 HOH HOH . E 3 HOH A 119 519 206 HOH HOH . E 3 HOH A 120 520 182 HOH HOH . E 3 HOH A 121 521 27 HOH HOH . E 3 HOH A 122 522 21 HOH HOH . E 3 HOH A 123 523 30 HOH HOH . E 3 HOH A 124 524 190 HOH HOH . E 3 HOH A 125 525 90 HOH HOH . E 3 HOH A 126 526 184 HOH HOH . E 3 HOH A 127 527 145 HOH HOH . E 3 HOH A 128 528 32 HOH HOH . E 3 HOH A 129 529 43 HOH HOH . E 3 HOH A 130 530 77 HOH HOH . E 3 HOH A 131 531 48 HOH HOH . E 3 HOH A 132 532 52 HOH HOH . E 3 HOH A 133 533 36 HOH HOH . E 3 HOH A 134 534 20 HOH HOH . E 3 HOH A 135 535 75 HOH HOH . E 3 HOH A 136 536 44 HOH HOH . E 3 HOH A 137 537 105 HOH HOH . E 3 HOH A 138 538 69 HOH HOH . E 3 HOH A 139 539 64 HOH HOH . E 3 HOH A 140 540 166 HOH HOH . E 3 HOH A 141 541 109 HOH HOH . E 3 HOH A 142 542 98 HOH HOH . E 3 HOH A 143 543 39 HOH HOH . E 3 HOH A 144 544 213 HOH HOH . E 3 HOH A 145 545 142 HOH HOH . E 3 HOH A 146 546 163 HOH HOH . E 3 HOH A 147 547 87 HOH HOH . E 3 HOH A 148 548 17 HOH HOH . E 3 HOH A 149 549 225 HOH HOH . E 3 HOH A 150 550 160 HOH HOH . E 3 HOH A 151 551 128 HOH HOH . E 3 HOH A 152 552 117 HOH HOH . E 3 HOH A 153 553 168 HOH HOH . E 3 HOH A 154 554 221 HOH HOH . E 3 HOH A 155 555 181 HOH HOH . E 3 HOH A 156 556 152 HOH HOH . E 3 HOH A 157 557 140 HOH HOH . E 3 HOH A 158 558 46 HOH HOH . E 3 HOH A 159 559 57 HOH HOH . E 3 HOH A 160 560 188 HOH HOH . E 3 HOH A 161 561 179 HOH HOH . E 3 HOH A 162 562 192 HOH HOH . E 3 HOH A 163 563 170 HOH HOH . E 3 HOH A 164 564 174 HOH HOH . E 3 HOH A 165 565 177 HOH HOH . E 3 HOH A 166 566 189 HOH HOH . E 3 HOH A 167 567 155 HOH HOH . E 3 HOH A 168 568 1 HOH HOH . E 3 HOH A 169 569 106 HOH HOH . E 3 HOH A 170 570 153 HOH HOH . E 3 HOH A 171 571 202 HOH HOH . E 3 HOH A 172 572 130 HOH HOH . E 3 HOH A 173 573 222 HOH HOH . E 3 HOH A 174 574 212 HOH HOH . E 3 HOH A 175 575 91 HOH HOH . E 3 HOH A 176 576 55 HOH HOH . E 3 HOH A 177 577 208 HOH HOH . E 3 HOH A 178 578 219 HOH HOH . E 3 HOH A 179 579 223 HOH HOH . E 3 HOH A 180 580 195 HOH HOH . E 3 HOH A 181 581 137 HOH HOH . E 3 HOH A 182 582 94 HOH HOH . E 3 HOH A 183 583 135 HOH HOH . E 3 HOH A 184 584 220 HOH HOH . E 3 HOH A 185 585 161 HOH HOH . E 3 HOH A 186 586 187 HOH HOH . E 3 HOH A 187 587 124 HOH HOH . E 3 HOH A 188 588 108 HOH HOH . E 3 HOH A 189 589 139 HOH HOH . E 3 HOH A 190 590 97 HOH HOH . E 3 HOH A 191 591 72 HOH HOH . E 3 HOH A 192 592 73 HOH HOH . E 3 HOH A 193 593 143 HOH HOH . E 3 HOH A 194 594 127 HOH HOH . E 3 HOH A 195 595 126 HOH HOH . E 3 HOH A 196 596 85 HOH HOH . E 3 HOH A 197 597 211 HOH HOH . E 3 HOH A 198 598 205 HOH HOH . E 3 HOH A 199 599 50 HOH HOH . E 3 HOH A 200 600 217 HOH HOH . E 3 HOH A 201 601 122 HOH HOH . E 3 HOH A 202 602 201 HOH HOH . E 3 HOH A 203 603 138 HOH HOH . E 3 HOH A 204 604 89 HOH HOH . E 3 HOH A 205 605 196 HOH HOH . E 3 HOH A 206 606 224 HOH HOH . E 3 HOH A 207 607 114 HOH HOH . E 3 HOH A 208 608 183 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 18.127 _atom_site.Cartn_y 16.468 _atom_site.Cartn_z -3.757 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 57.41 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 302 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #