data_8PLH # _model_server_result.job_id NvmVlFmshQBEiZxePQzgZg _model_server_result.datetime_utc '2024-11-27 01:03:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8plh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":602}' # _entry.id 8PLH # _exptl.entry_id 8PLH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 193.226 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-(5-amino-1,3,4-thiadiazol-2-yl)phenol _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 113.43 _cell.angle_gamma 90 _cell.entry_id 8PLH _cell.length_a 146.154 _cell.length_b 103.498 _cell.length_c 62.207 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8PLH _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_757 -x+2,y,-z+2 -1 0 0 0 1 0 0 0 -1 242.837464 0 114.155637 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 155 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 154 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 160 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 159 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.045 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C8 H7 N3 O S' _chem_comp.formula_weight 193.226 _chem_comp.id GVY _chem_comp.mon_nstd_flag . _chem_comp.name 4-(5-amino-1,3,4-thiadiazol-2-yl)phenol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C3 GVY sing 220 n n C2 C3 GVY doub 221 n y C2 C1 GVY sing 222 n y C3 C4 GVY sing 223 n y C1 C6 GVY doub 224 n y C4 C5 GVY doub 225 n y C6 C5 GVY sing 226 n y C6 C7 GVY sing 227 n n N1 C7 GVY doub 228 n y N1 N2 GVY sing 229 n y C7 S1 GVY sing 230 n y N2 C8 GVY doub 231 n y S1 C8 GVY sing 232 n y C8 N3 GVY sing 233 n n N3 H1 GVY sing 234 n n N3 H2 GVY sing 235 n n C4 H3 GVY sing 236 n n C5 H4 GVY sing 237 n n C1 H5 GVY sing 238 n n C2 H6 GVY sing 239 n n O1 H7 GVY sing 240 n n # _atom_sites.entry_id 8PLH _atom_sites.fract_transf_matrix[1][1] 0.006842 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002965 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009662 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01752 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FAD A 1 601 1 FAD FAD . C 3 GVY A 1 602 1 GVY LIG . D 3 GVY A 1 603 2 GVY LIG . E 3 GVY A 1 604 3 GVY LIG . F 4 HOH A 1 701 121 HOH HOH . F 4 HOH A 2 702 184 HOH HOH . F 4 HOH A 3 703 92 HOH HOH . F 4 HOH A 4 704 71 HOH HOH . F 4 HOH A 5 705 57 HOH HOH . F 4 HOH A 6 706 147 HOH HOH . F 4 HOH A 7 707 169 HOH HOH . F 4 HOH A 8 708 118 HOH HOH . F 4 HOH A 9 709 141 HOH HOH . F 4 HOH A 10 710 189 HOH HOH . F 4 HOH A 11 711 167 HOH HOH . F 4 HOH A 12 712 190 HOH HOH . F 4 HOH A 13 713 180 HOH HOH . F 4 HOH A 14 714 19 HOH HOH . F 4 HOH A 15 715 129 HOH HOH . F 4 HOH A 16 716 29 HOH HOH . F 4 HOH A 17 717 28 HOH HOH . F 4 HOH A 18 718 20 HOH HOH . F 4 HOH A 19 719 30 HOH HOH . F 4 HOH A 20 720 16 HOH HOH . F 4 HOH A 21 721 85 HOH HOH . F 4 HOH A 22 722 153 HOH HOH . F 4 HOH A 23 723 50 HOH HOH . F 4 HOH A 24 724 63 HOH HOH . F 4 HOH A 25 725 93 HOH HOH . F 4 HOH A 26 726 124 HOH HOH . F 4 HOH A 27 727 18 HOH HOH . F 4 HOH A 28 728 80 HOH HOH . F 4 HOH A 29 729 139 HOH HOH . F 4 HOH A 30 730 170 HOH HOH . F 4 HOH A 31 731 123 HOH HOH . F 4 HOH A 32 732 24 HOH HOH . F 4 HOH A 33 733 33 HOH HOH . F 4 HOH A 34 734 38 HOH HOH . F 4 HOH A 35 735 39 HOH HOH . F 4 HOH A 36 736 77 HOH HOH . F 4 HOH A 37 737 81 HOH HOH . F 4 HOH A 38 738 25 HOH HOH . F 4 HOH A 39 739 66 HOH HOH . F 4 HOH A 40 740 162 HOH HOH . F 4 HOH A 41 741 15 HOH HOH . F 4 HOH A 42 742 84 HOH HOH . F 4 HOH A 43 743 65 HOH HOH . F 4 HOH A 44 744 88 HOH HOH . F 4 HOH A 45 745 32 HOH HOH . F 4 HOH A 46 746 116 HOH HOH . F 4 HOH A 47 747 133 HOH HOH . F 4 HOH A 48 748 117 HOH HOH . F 4 HOH A 49 749 156 HOH HOH . F 4 HOH A 50 750 107 HOH HOH . F 4 HOH A 51 751 72 HOH HOH . F 4 HOH A 52 752 177 HOH HOH . F 4 HOH A 53 753 79 HOH HOH . F 4 HOH A 54 754 45 HOH HOH . F 4 HOH A 55 755 10 HOH HOH . F 4 HOH A 56 756 7 HOH HOH . F 4 HOH A 57 757 108 HOH HOH . F 4 HOH A 58 758 174 HOH HOH . F 4 HOH A 59 759 172 HOH HOH . F 4 HOH A 60 760 165 HOH HOH . F 4 HOH A 61 761 83 HOH HOH . F 4 HOH A 62 762 13 HOH HOH . F 4 HOH A 63 763 70 HOH HOH . F 4 HOH A 64 764 104 HOH HOH . F 4 HOH A 65 765 37 HOH HOH . F 4 HOH A 66 766 144 HOH HOH . F 4 HOH A 67 767 3 HOH HOH . F 4 HOH A 68 768 61 HOH HOH . F 4 HOH A 69 769 48 HOH HOH . F 4 HOH A 70 770 125 HOH HOH . F 4 HOH A 71 771 105 HOH HOH . F 4 HOH A 72 772 94 HOH HOH . F 4 HOH A 73 773 183 HOH HOH . F 4 HOH A 74 774 55 HOH HOH . F 4 HOH A 75 775 98 HOH HOH . F 4 HOH A 76 776 185 HOH HOH . F 4 HOH A 77 777 95 HOH HOH . F 4 HOH A 78 778 109 HOH HOH . F 4 HOH A 79 779 112 HOH HOH . F 4 HOH A 80 780 9 HOH HOH . F 4 HOH A 81 781 60 HOH HOH . F 4 HOH A 82 782 44 HOH HOH . F 4 HOH A 83 783 135 HOH HOH . F 4 HOH A 84 784 12 HOH HOH . F 4 HOH A 85 785 86 HOH HOH . F 4 HOH A 86 786 158 HOH HOH . F 4 HOH A 87 787 82 HOH HOH . F 4 HOH A 88 788 100 HOH HOH . F 4 HOH A 89 789 23 HOH HOH . F 4 HOH A 90 790 14 HOH HOH . F 4 HOH A 91 791 49 HOH HOH . F 4 HOH A 92 792 36 HOH HOH . F 4 HOH A 93 793 137 HOH HOH . F 4 HOH A 94 794 187 HOH HOH . F 4 HOH A 95 795 53 HOH HOH . F 4 HOH A 96 796 47 HOH HOH . F 4 HOH A 97 797 127 HOH HOH . F 4 HOH A 98 798 54 HOH HOH . F 4 HOH A 99 799 17 HOH HOH . F 4 HOH A 100 800 26 HOH HOH . F 4 HOH A 101 801 110 HOH HOH . F 4 HOH A 102 802 97 HOH HOH . F 4 HOH A 103 803 101 HOH HOH . F 4 HOH A 104 804 78 HOH HOH . F 4 HOH A 105 805 11 HOH HOH . F 4 HOH A 106 806 114 HOH HOH . F 4 HOH A 107 807 122 HOH HOH . F 4 HOH A 108 808 111 HOH HOH . F 4 HOH A 109 809 6 HOH HOH . F 4 HOH A 110 810 132 HOH HOH . F 4 HOH A 111 811 130 HOH HOH . F 4 HOH A 112 812 160 HOH HOH . F 4 HOH A 113 813 40 HOH HOH . F 4 HOH A 114 814 89 HOH HOH . F 4 HOH A 115 815 87 HOH HOH . F 4 HOH A 116 816 42 HOH HOH . F 4 HOH A 117 817 136 HOH HOH . F 4 HOH A 118 818 152 HOH HOH . F 4 HOH A 119 819 27 HOH HOH . F 4 HOH A 120 820 31 HOH HOH . F 4 HOH A 121 821 5 HOH HOH . F 4 HOH A 122 822 2 HOH HOH . F 4 HOH A 123 823 193 HOH HOH . F 4 HOH A 124 824 191 HOH HOH . F 4 HOH A 125 825 148 HOH HOH . F 4 HOH A 126 826 8 HOH HOH . F 4 HOH A 127 827 178 HOH HOH . F 4 HOH A 128 828 43 HOH HOH . F 4 HOH A 129 829 35 HOH HOH . F 4 HOH A 130 830 58 HOH HOH . F 4 HOH A 131 831 41 HOH HOH . F 4 HOH A 132 832 56 HOH HOH . F 4 HOH A 133 833 161 HOH HOH . F 4 HOH A 134 834 151 HOH HOH . F 4 HOH A 135 835 175 HOH HOH . F 4 HOH A 136 836 131 HOH HOH . F 4 HOH A 137 837 102 HOH HOH . F 4 HOH A 138 838 134 HOH HOH . F 4 HOH A 139 839 99 HOH HOH . F 4 HOH A 140 840 150 HOH HOH . F 4 HOH A 141 841 22 HOH HOH . F 4 HOH A 142 842 74 HOH HOH . F 4 HOH A 143 843 179 HOH HOH . F 4 HOH A 144 844 21 HOH HOH . F 4 HOH A 145 845 146 HOH HOH . F 4 HOH A 146 846 4 HOH HOH . F 4 HOH A 147 847 46 HOH HOH . F 4 HOH A 148 848 188 HOH HOH . F 4 HOH A 149 849 76 HOH HOH . F 4 HOH A 150 850 186 HOH HOH . F 4 HOH A 151 851 68 HOH HOH . F 4 HOH A 152 852 113 HOH HOH . F 4 HOH A 153 853 138 HOH HOH . F 4 HOH A 154 854 62 HOH HOH . F 4 HOH A 155 855 75 HOH HOH . F 4 HOH A 156 856 192 HOH HOH . F 4 HOH A 157 857 163 HOH HOH . F 4 HOH A 158 858 96 HOH HOH . F 4 HOH A 159 859 51 HOH HOH . F 4 HOH A 160 860 1 HOH HOH . F 4 HOH A 161 861 64 HOH HOH . F 4 HOH A 162 862 106 HOH HOH . F 4 HOH A 163 863 90 HOH HOH . F 4 HOH A 164 864 142 HOH HOH . F 4 HOH A 165 865 155 HOH HOH . F 4 HOH A 166 866 168 HOH HOH . F 4 HOH A 167 867 69 HOH HOH . F 4 HOH A 168 868 182 HOH HOH . F 4 HOH A 169 869 143 HOH HOH . F 4 HOH A 170 870 119 HOH HOH . F 4 HOH A 171 871 181 HOH HOH . F 4 HOH A 172 872 67 HOH HOH . F 4 HOH A 173 873 149 HOH HOH . F 4 HOH A 174 874 59 HOH HOH . F 4 HOH A 175 875 34 HOH HOH . F 4 HOH A 176 876 103 HOH HOH . F 4 HOH A 177 877 115 HOH HOH . F 4 HOH A 178 878 73 HOH HOH . F 4 HOH A 179 879 154 HOH HOH . F 4 HOH A 180 880 164 HOH HOH . F 4 HOH A 181 881 145 HOH HOH . F 4 HOH A 182 882 120 HOH HOH . F 4 HOH A 183 883 140 HOH HOH . F 4 HOH A 184 884 159 HOH HOH . F 4 HOH A 185 885 126 HOH HOH . F 4 HOH A 186 886 157 HOH HOH . F 4 HOH A 187 887 128 HOH HOH . F 4 HOH A 188 888 166 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 GVY . . . C 3 119.796 -13.558 53.934 1 68.11 ? N1 GVY 602 A 1 HETATM 2 N N3 GVY . . . C 3 117.883 -11.759 56.32 1 58.33 ? N3 GVY 602 A 1 HETATM 3 C C4 GVY . . . C 3 123.257 -15.852 53.028 1 40.33 ? C4 GVY 602 A 1 HETATM 4 C C5 GVY . . . C 3 122.05 -15.225 53.325 1 49.26 ? C5 GVY 602 A 1 HETATM 5 C C6 GVY . . . C 3 121.529 -15.186 54.623 1 55.46 ? C6 GVY 602 A 1 HETATM 6 C C7 GVY . . . C 3 120.383 -14.275 54.887 1 62.21 ? C7 GVY 602 A 1 HETATM 7 C C8 GVY . . . C 3 118.712 -12.617 55.661 1 64.76 ? C8 GVY 602 A 1 HETATM 8 C C1 GVY . . . C 3 122.217 -15.877 55.633 1 51.15 ? C1 GVY 602 A 1 HETATM 9 C C2 GVY . . . C 3 123.443 -16.497 55.368 1 47.48 ? C2 GVY 602 A 1 HETATM 10 C C3 GVY . . . C 3 123.967 -16.457 54.051 1 44 ? C3 GVY 602 A 1 HETATM 11 N N2 GVY . . . C 3 118.89 -12.649 54.312 1 66.1 ? N2 GVY 602 A 1 HETATM 12 S S1 GVY . . . C 3 119.732 -13.8 56.474 1 78.74 ? S1 GVY 602 A 1 HETATM 13 O O1 GVY . . . C 3 125.217 -16.985 53.863 1 41.53 ? O1 GVY 602 A 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 339 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 13 #