data_8PM8 # _model_server_result.job_id JzBzF2oFosEYJCxRxWQswA _model_server_result.datetime_utc '2024-11-27 14:02:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8pm8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":201}' # _entry.id 8PM8 # _exptl.entry_id 8PM8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 273.241 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description Tolcapone _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8PM8 _cell.length_a 42.799 _cell.length_b 64.134 _cell.length_c 85.002 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8PM8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 2 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F 1 1 A,B,C,D,E,F 1 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C14 H11 N O5' _chem_comp.formula_weight 273.241 _chem_comp.id TCW _chem_comp.mon_nstd_flag . _chem_comp.name Tolcapone _chem_comp.type non-polymer _chem_comp.pdbx_synonyms (3,4-dihydroxy-5-nitrophenyl)(4-methylphenyl)methanone # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O13 C12 TCW doub 271 n n C12 C4 TCW sing 272 n n C12 C14 TCW sing 273 n n C4 C3 TCW doub 274 n y C4 C5 TCW sing 275 n y C3 C2 TCW sing 276 n y C2 O7 TCW sing 277 n n C2 C1 TCW doub 278 n y C5 C6 TCW doub 279 n y C6 N9 TCW sing 280 n n C6 C1 TCW sing 281 n y N9 O11 TCW sing 282 n n N9 O10 TCW doub 283 n n C1 O8 TCW sing 284 n n C14 C19 TCW doub 285 n y C14 C15 TCW sing 286 n y C19 C18 TCW sing 287 n y C18 C17 TCW doub 288 n y C17 C20 TCW sing 289 n n C17 C16 TCW sing 290 n y C16 C15 TCW doub 291 n y C3 H3 TCW sing 292 n n O7 HO7 TCW sing 293 n n C5 H5 TCW sing 294 n n O8 HO8 TCW sing 295 n n C19 H19 TCW sing 296 n n C18 H18 TCW sing 297 n n C20 H20 TCW sing 298 n n C20 H20A TCW sing 299 n n C20 H20B TCW sing 300 n n C16 H16 TCW sing 301 n n C15 H15 TCW sing 302 n n # _atom_sites.entry_id 8PM8 _atom_sites.fract_transf_matrix[1][1] 0.023365 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015592 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011764 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 TCW A 1 201 201 TCW TCW . D 2 TCW B 1 201 201 TCW TCW . E 3 HOH A 1 301 46 HOH HOH . E 3 HOH A 2 302 29 HOH HOH . E 3 HOH A 3 303 37 HOH HOH . E 3 HOH A 4 304 70 HOH HOH . E 3 HOH A 5 305 111 HOH HOH . E 3 HOH A 6 306 44 HOH HOH . E 3 HOH A 7 307 106 HOH HOH . E 3 HOH A 8 308 19 HOH HOH . E 3 HOH A 9 309 96 HOH HOH . E 3 HOH A 10 310 85 HOH HOH . E 3 HOH A 11 311 52 HOH HOH . E 3 HOH A 12 312 31 HOH HOH . E 3 HOH A 13 313 5 HOH HOH . E 3 HOH A 14 314 15 HOH HOH . E 3 HOH A 15 315 42 HOH HOH . E 3 HOH A 16 316 16 HOH HOH . E 3 HOH A 17 317 9 HOH HOH . E 3 HOH A 18 318 89 HOH HOH . E 3 HOH A 19 319 63 HOH HOH . E 3 HOH A 20 320 75 HOH HOH . E 3 HOH A 21 321 13 HOH HOH . E 3 HOH A 22 322 27 HOH HOH . E 3 HOH A 23 323 26 HOH HOH . E 3 HOH A 24 324 56 HOH HOH . E 3 HOH A 25 325 22 HOH HOH . E 3 HOH A 26 326 3 HOH HOH . E 3 HOH A 27 327 53 HOH HOH . E 3 HOH A 28 328 7 HOH HOH . E 3 HOH A 29 329 59 HOH HOH . E 3 HOH A 30 330 69 HOH HOH . E 3 HOH A 31 331 84 HOH HOH . E 3 HOH A 32 333 55 HOH HOH . E 3 HOH A 33 334 12 HOH HOH . E 3 HOH A 34 335 86 HOH HOH . E 3 HOH A 35 336 68 HOH HOH . E 3 HOH A 36 337 14 HOH HOH . E 3 HOH A 37 338 30 HOH HOH . E 3 HOH A 38 339 28 HOH HOH . E 3 HOH A 39 340 49 HOH HOH . E 3 HOH A 40 341 41 HOH HOH . E 3 HOH A 41 342 36 HOH HOH . E 3 HOH A 42 343 60 HOH HOH . E 3 HOH A 43 344 54 HOH HOH . E 3 HOH A 44 345 107 HOH HOH . E 3 HOH A 45 346 18 HOH HOH . E 3 HOH A 46 347 33 HOH HOH . E 3 HOH A 47 348 50 HOH HOH . E 3 HOH A 48 349 114 HOH HOH . E 3 HOH A 49 350 74 HOH HOH . E 3 HOH A 50 351 32 HOH HOH . E 3 HOH A 51 352 57 HOH HOH . E 3 HOH A 52 353 97 HOH HOH . E 3 HOH A 53 354 109 HOH HOH . E 3 HOH A 54 355 115 HOH HOH . E 3 HOH A 55 356 92 HOH HOH . E 3 HOH A 56 357 112 HOH HOH . E 3 HOH A 57 358 87 HOH HOH . E 3 HOH A 58 359 51 HOH HOH . E 3 HOH A 59 360 93 HOH HOH . E 3 HOH A 60 361 24 HOH HOH . E 3 HOH A 61 362 117 HOH HOH . E 3 HOH A 62 363 83 HOH HOH . E 3 HOH A 63 364 90 HOH HOH . F 3 HOH B 1 301 65 HOH HOH . F 3 HOH B 2 302 1 HOH HOH . F 3 HOH B 3 303 80 HOH HOH . F 3 HOH B 4 304 101 HOH HOH . F 3 HOH B 5 305 66 HOH HOH . F 3 HOH B 6 306 58 HOH HOH . F 3 HOH B 7 307 11 HOH HOH . F 3 HOH B 8 308 113 HOH HOH . F 3 HOH B 9 309 100 HOH HOH . F 3 HOH B 10 310 10 HOH HOH . F 3 HOH B 11 311 2 HOH HOH . F 3 HOH B 12 312 4 HOH HOH . F 3 HOH B 13 313 23 HOH HOH . F 3 HOH B 14 314 82 HOH HOH . F 3 HOH B 15 315 64 HOH HOH . F 3 HOH B 16 316 38 HOH HOH . F 3 HOH B 17 317 99 HOH HOH . F 3 HOH B 18 318 35 HOH HOH . F 3 HOH B 19 319 76 HOH HOH . F 3 HOH B 20 320 61 HOH HOH . F 3 HOH B 21 321 20 HOH HOH . F 3 HOH B 22 322 48 HOH HOH . F 3 HOH B 23 323 72 HOH HOH . F 3 HOH B 24 324 104 HOH HOH . F 3 HOH B 25 325 6 HOH HOH . F 3 HOH B 26 326 78 HOH HOH . F 3 HOH B 27 327 34 HOH HOH . F 3 HOH B 28 328 79 HOH HOH . F 3 HOH B 29 329 62 HOH HOH . F 3 HOH B 30 330 17 HOH HOH . F 3 HOH B 31 331 110 HOH HOH . F 3 HOH B 32 332 77 HOH HOH . F 3 HOH B 33 333 25 HOH HOH . F 3 HOH B 34 334 43 HOH HOH . F 3 HOH B 35 335 8 HOH HOH . F 3 HOH B 36 336 40 HOH HOH . F 3 HOH B 37 337 95 HOH HOH . F 3 HOH B 38 338 39 HOH HOH . F 3 HOH B 39 339 91 HOH HOH . F 3 HOH B 40 340 67 HOH HOH . F 3 HOH B 41 341 81 HOH HOH . F 3 HOH B 42 342 108 HOH HOH . F 3 HOH B 43 343 102 HOH HOH . F 3 HOH B 44 344 45 HOH HOH . F 3 HOH B 45 345 105 HOH HOH . F 3 HOH B 46 346 94 HOH HOH . F 3 HOH B 47 347 47 HOH HOH . F 3 HOH B 48 348 21 HOH HOH . F 3 HOH B 49 349 118 HOH HOH . F 3 HOH B 50 350 98 HOH HOH . F 3 HOH B 51 351 116 HOH HOH . F 3 HOH B 52 352 71 HOH HOH . F 3 HOH B 53 353 103 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O13 TCW . . . D 2 1.743 6.807 -1.852 0.51 37.78 ? O13 TCW 201 B 1 HETATM 2 C C12 TCW . . . D 2 1.194 6.526 -0.909 0.51 37.63 ? C12 TCW 201 B 1 HETATM 3 C C4 TCW . . . D 2 0.916 5.051 -0.624 0.51 35.4 ? C4 TCW 201 B 1 HETATM 4 C C3 TCW . . . D 2 1.726 4.092 -1.214 0.51 37.8 ? C3 TCW 201 B 1 HETATM 5 C C2 TCW . . . D 2 1.527 2.704 -0.969 0.51 40.15 ? C2 TCW 201 B 1 HETATM 6 O O7 TCW . . . D 2 2.394 1.728 -1.587 0.51 42.96 ? O7 TCW 201 B 1 HETATM 7 C C5 TCW . . . D 2 -0.112 4.674 0.196 0.51 33.4 ? C5 TCW 201 B 1 HETATM 8 C C6 TCW . . . D 2 -0.332 3.273 0.449 0.51 36.66 ? C6 TCW 201 B 1 HETATM 9 N N9 TCW . . . D 2 -1.452 2.884 1.338 0.51 39.54 ? N9 TCW 201 B 1 HETATM 10 O O11 TCW . . . D 2 -2.192 3.87 1.958 0.51 39.73 ? O11 TCW 201 B 1 HETATM 11 O O10 TCW . . . D 2 -1.748 1.552 1.533 0.51 42.52 ? O10 TCW 201 B 1 HETATM 12 C C1 TCW . . . D 2 0.483 2.315 -0.134 0.51 37.59 ? C1 TCW 201 B 1 HETATM 13 O O8 TCW . . . D 2 0.26 0.907 0.116 0.51 38.15 ? O8 TCW 201 B 1 HETATM 14 C C14 TCW . . . D 2 0.796 7.69 0.098 0.51 27.54 ? C14 TCW 201 B 1 HETATM 15 C C19 TCW . . . D 2 0.214 8.863 -0.394 0.51 31.63 ? C19 TCW 201 B 1 HETATM 16 C C18 TCW . . . D 2 -0.119 9.868 0.447 0.51 29.17 ? C18 TCW 201 B 1 HETATM 17 C C17 TCW . . . D 2 0.127 9.717 1.814 0.51 26.51 ? C17 TCW 201 B 1 HETATM 18 C C20 TCW . . . D 2 -0.222 10.781 2.753 0.51 34.65 ? C20 TCW 201 B 1 HETATM 19 C C16 TCW . . . D 2 0.705 8.58 2.292 0.51 31.17 ? C16 TCW 201 B 1 HETATM 20 C C15 TCW . . . D 2 1.05 7.557 1.438 0.51 29.94 ? C15 TCW 201 B 1 # _model_server_stats.io_time_ms 49 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 242 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 20 #