data_8PNS # _model_server_result.job_id h96FxD3JkMS8nfcHNfrcGQ _model_server_result.datetime_utc '2025-07-07 19:01:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8pns # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":701}' # _entry.id 8PNS # _exptl.entry_id 8PNS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8PNS _cell.length_a 155.918 _cell.length_b 155.918 _cell.length_c 99.511 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8PNS _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 G N N # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 192 n n PA O2A FAD sing 193 n n PA O5B FAD sing 194 n n PA O3P FAD sing 195 n n O2A HOA2 FAD sing 196 n n O5B C5B FAD sing 197 n n C5B C4B FAD sing 198 n n C5B H51A FAD sing 199 n n C5B H52A FAD sing 200 n n C4B O4B FAD sing 201 n n C4B C3B FAD sing 202 n n C4B H4B FAD sing 203 n n O4B C1B FAD sing 204 n n C3B O3B FAD sing 205 n n C3B C2B FAD sing 206 n n C3B H3B FAD sing 207 n n O3B HO3A FAD sing 208 n n C2B O2B FAD sing 209 n n C2B C1B FAD sing 210 n n C2B H2B FAD sing 211 n n O2B HO2A FAD sing 212 n n C1B N9A FAD sing 213 n n C1B H1B FAD sing 214 n n N9A C8A FAD sing 215 n y N9A C4A FAD sing 216 n y C8A N7A FAD doub 217 n y C8A H8A FAD sing 218 n n N7A C5A FAD sing 219 n y C5A C6A FAD sing 220 n y C5A C4A FAD doub 221 n y C6A N6A FAD sing 222 n n C6A N1A FAD doub 223 n y N6A H61A FAD sing 224 n n N6A H62A FAD sing 225 n n N1A C2A FAD sing 226 n y C2A N3A FAD doub 227 n y C2A H2A FAD sing 228 n n N3A C4A FAD sing 229 n y N1 C2 FAD sing 230 n n N1 C10 FAD doub 231 n n C2 O2 FAD doub 232 n n C2 N3 FAD sing 233 n n N3 C4 FAD sing 234 n n N3 HN3 FAD sing 235 n n C4 O4 FAD doub 236 n n C4 C4X FAD sing 237 n n C4X N5 FAD doub 238 n n C4X C10 FAD sing 239 n n N5 C5X FAD sing 240 n n C5X C6 FAD doub 241 n y C5X C9A FAD sing 242 n y C6 C7 FAD sing 243 n y C6 H6 FAD sing 244 n n C7 C7M FAD sing 245 n n C7 C8 FAD doub 246 n y C7M HM71 FAD sing 247 n n C7M HM72 FAD sing 248 n n C7M HM73 FAD sing 249 n n C8 C8M FAD sing 250 n n C8 C9 FAD sing 251 n y C8M HM81 FAD sing 252 n n C8M HM82 FAD sing 253 n n C8M HM83 FAD sing 254 n n C9 C9A FAD doub 255 n y C9 H9 FAD sing 256 n n C9A N10 FAD sing 257 n n N10 C10 FAD sing 258 n n N10 C1' FAD sing 259 n n C1' C2' FAD sing 260 n n C1' "H1'1" FAD sing 261 n n C1' "H1'2" FAD sing 262 n n C2' O2' FAD sing 263 n n C2' C3' FAD sing 264 n n C2' H2' FAD sing 265 n n O2' HO2' FAD sing 266 n n C3' O3' FAD sing 267 n n C3' C4' FAD sing 268 n n C3' H3' FAD sing 269 n n O3' HO3' FAD sing 270 n n C4' O4' FAD sing 271 n n C4' C5' FAD sing 272 n n C4' H4' FAD sing 273 n n O4' HO4' FAD sing 274 n n C5' O5' FAD sing 275 n n C5' "H5'1" FAD sing 276 n n C5' "H5'2" FAD sing 277 n n O5' P FAD sing 278 n n P O1P FAD doub 279 n n P O2P FAD sing 280 n n P O3P FAD sing 281 n n O2P HOP2 FAD sing 282 n n # _atom_sites.entry_id 8PNS _atom_sites.fract_transf_matrix[1][1] 0.006414 _atom_sites.fract_transf_matrix[1][2] 0.003703 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007406 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010049 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FAD A 1 701 700 FAD FAD . D 3 PEG A 1 702 702 PEG PEG . E 4 CO8 A 1 703 703 CO8 CO8 . F 3 PEG A 1 704 709 PEG PEG . G 2 FAD B 1 701 699 FAD FAD . H 4 CO8 B 1 702 710 CO8 CO8 . I 5 HOH A 1 801 128 HOH HOH . I 5 HOH A 2 802 144 HOH HOH . I 5 HOH A 3 803 120 HOH HOH . I 5 HOH A 4 804 133 HOH HOH . I 5 HOH A 5 805 110 HOH HOH . I 5 HOH A 6 806 40 HOH HOH . I 5 HOH A 7 807 2 HOH HOH . I 5 HOH A 8 808 138 HOH HOH . I 5 HOH A 9 809 56 HOH HOH . I 5 HOH A 10 810 122 HOH HOH . I 5 HOH A 11 811 48 HOH HOH . I 5 HOH A 12 812 79 HOH HOH . I 5 HOH A 13 813 6 HOH HOH . I 5 HOH A 14 814 69 HOH HOH . I 5 HOH A 15 815 91 HOH HOH . I 5 HOH A 16 816 29 HOH HOH . I 5 HOH A 17 817 103 HOH HOH . I 5 HOH A 18 818 1 HOH HOH . I 5 HOH A 19 819 141 HOH HOH . I 5 HOH A 20 820 147 HOH HOH . I 5 HOH A 21 821 95 HOH HOH . I 5 HOH A 22 822 57 HOH HOH . I 5 HOH A 23 823 163 HOH HOH . I 5 HOH A 24 824 89 HOH HOH . I 5 HOH A 25 825 10 HOH HOH . I 5 HOH A 26 826 13 HOH HOH . I 5 HOH A 27 827 127 HOH HOH . I 5 HOH A 28 828 108 HOH HOH . I 5 HOH A 29 829 35 HOH HOH . I 5 HOH A 30 830 12 HOH HOH . I 5 HOH A 31 831 131 HOH HOH . I 5 HOH A 32 832 106 HOH HOH . I 5 HOH A 33 833 158 HOH HOH . I 5 HOH A 34 834 24 HOH HOH . I 5 HOH A 35 835 165 HOH HOH . I 5 HOH A 36 836 135 HOH HOH . I 5 HOH A 37 837 111 HOH HOH . I 5 HOH A 38 838 82 HOH HOH . I 5 HOH A 39 839 8 HOH HOH . I 5 HOH A 40 840 49 HOH HOH . I 5 HOH A 41 841 78 HOH HOH . I 5 HOH A 42 842 22 HOH HOH . I 5 HOH A 43 843 114 HOH HOH . I 5 HOH A 44 844 99 HOH HOH . I 5 HOH A 45 845 113 HOH HOH . I 5 HOH A 46 846 159 HOH HOH . I 5 HOH A 47 847 19 HOH HOH . I 5 HOH A 48 848 33 HOH HOH . I 5 HOH A 49 849 9 HOH HOH . I 5 HOH A 50 850 148 HOH HOH . I 5 HOH A 51 851 54 HOH HOH . I 5 HOH A 52 852 100 HOH HOH . I 5 HOH A 53 853 59 HOH HOH . I 5 HOH A 54 854 94 HOH HOH . I 5 HOH A 55 855 156 HOH HOH . I 5 HOH A 56 856 44 HOH HOH . I 5 HOH A 57 857 101 HOH HOH . I 5 HOH A 58 858 142 HOH HOH . I 5 HOH A 59 859 153 HOH HOH . I 5 HOH A 60 860 118 HOH HOH . I 5 HOH A 61 861 64 HOH HOH . I 5 HOH A 62 862 71 HOH HOH . I 5 HOH A 63 863 168 HOH HOH . I 5 HOH A 64 864 139 HOH HOH . I 5 HOH A 65 865 116 HOH HOH . I 5 HOH A 66 866 112 HOH HOH . I 5 HOH A 67 867 60 HOH HOH . I 5 HOH A 68 868 34 HOH HOH . I 5 HOH A 69 869 105 HOH HOH . I 5 HOH A 70 870 137 HOH HOH . I 5 HOH A 71 871 72 HOH HOH . I 5 HOH A 72 872 53 HOH HOH . I 5 HOH A 73 873 75 HOH HOH . I 5 HOH A 74 874 27 HOH HOH . I 5 HOH A 75 875 145 HOH HOH . I 5 HOH A 76 876 161 HOH HOH . I 5 HOH A 77 877 162 HOH HOH . I 5 HOH A 78 878 170 HOH HOH . J 5 HOH B 1 801 121 HOH HOH . J 5 HOH B 2 802 169 HOH HOH . J 5 HOH B 3 803 55 HOH HOH . J 5 HOH B 4 804 155 HOH HOH . J 5 HOH B 5 805 136 HOH HOH . J 5 HOH B 6 806 80 HOH HOH . J 5 HOH B 7 807 4 HOH HOH . J 5 HOH B 8 808 77 HOH HOH . J 5 HOH B 9 809 154 HOH HOH . J 5 HOH B 10 810 123 HOH HOH . J 5 HOH B 11 811 51 HOH HOH . J 5 HOH B 12 812 3 HOH HOH . J 5 HOH B 13 813 149 HOH HOH . J 5 HOH B 14 814 88 HOH HOH . J 5 HOH B 15 815 28 HOH HOH . J 5 HOH B 16 816 167 HOH HOH . J 5 HOH B 17 817 58 HOH HOH . J 5 HOH B 18 818 90 HOH HOH . J 5 HOH B 19 819 140 HOH HOH . J 5 HOH B 20 820 46 HOH HOH . J 5 HOH B 21 821 14 HOH HOH . J 5 HOH B 22 822 43 HOH HOH . J 5 HOH B 23 823 16 HOH HOH . J 5 HOH B 24 824 152 HOH HOH . J 5 HOH B 25 825 93 HOH HOH . J 5 HOH B 26 826 130 HOH HOH . J 5 HOH B 27 827 157 HOH HOH . J 5 HOH B 28 828 38 HOH HOH . J 5 HOH B 29 829 18 HOH HOH . J 5 HOH B 30 830 47 HOH HOH . J 5 HOH B 31 831 124 HOH HOH . J 5 HOH B 32 832 86 HOH HOH . J 5 HOH B 33 833 74 HOH HOH . J 5 HOH B 34 834 96 HOH HOH . J 5 HOH B 35 835 26 HOH HOH . J 5 HOH B 36 836 37 HOH HOH . J 5 HOH B 37 837 11 HOH HOH . J 5 HOH B 38 838 5 HOH HOH . J 5 HOH B 39 839 104 HOH HOH . J 5 HOH B 40 840 31 HOH HOH . J 5 HOH B 41 841 129 HOH HOH . J 5 HOH B 42 842 7 HOH HOH . J 5 HOH B 43 843 117 HOH HOH . J 5 HOH B 44 844 63 HOH HOH . J 5 HOH B 45 845 45 HOH HOH . J 5 HOH B 46 846 146 HOH HOH . J 5 HOH B 47 847 15 HOH HOH . J 5 HOH B 48 848 83 HOH HOH . J 5 HOH B 49 849 67 HOH HOH . J 5 HOH B 50 850 134 HOH HOH . J 5 HOH B 51 851 85 HOH HOH . J 5 HOH B 52 852 92 HOH HOH . J 5 HOH B 53 853 98 HOH HOH . J 5 HOH B 54 854 164 HOH HOH . J 5 HOH B 55 855 109 HOH HOH . J 5 HOH B 56 856 166 HOH HOH . J 5 HOH B 57 857 50 HOH HOH . J 5 HOH B 58 858 42 HOH HOH . J 5 HOH B 59 859 132 HOH HOH . J 5 HOH B 60 860 25 HOH HOH . J 5 HOH B 61 861 73 HOH HOH . J 5 HOH B 62 862 23 HOH HOH . J 5 HOH B 63 863 87 HOH HOH . J 5 HOH B 64 864 151 HOH HOH . J 5 HOH B 65 865 17 HOH HOH . J 5 HOH B 66 866 70 HOH HOH . J 5 HOH B 67 867 41 HOH HOH . J 5 HOH B 68 868 160 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . C 2 -14.251 -50.454 6.095 1 34.46 ? PA FAD 701 A 1 HETATM 2 O O1A FAD . . . C 2 -15.383 -49.829 6.827 1 31.16 ? O1A FAD 701 A 1 HETATM 3 O O2A FAD . . . C 2 -14.404 -50.724 4.642 1 40.79 ? O2A FAD 701 A 1 HETATM 4 O O5B FAD . . . C 2 -13.81 -51.793 6.842 1 34.64 ? O5B FAD 701 A 1 HETATM 5 C C5B FAD . . . C 2 -13.825 -51.823 8.287 1 30.32 ? C5B FAD 701 A 1 HETATM 6 C C4B FAD . . . C 2 -13.47 -53.209 8.763 1 30.62 ? C4B FAD 701 A 1 HETATM 7 O O4B FAD . . . C 2 -14.461 -54.149 8.275 1 29.17 ? O4B FAD 701 A 1 HETATM 8 C C3B FAD . . . C 2 -12.117 -53.761 8.295 1 28.7 ? C3B FAD 701 A 1 HETATM 9 O O3B FAD . . . C 2 -11.532 -54.592 9.287 1 25.73 ? O3B FAD 701 A 1 HETATM 10 C C2B FAD . . . C 2 -12.514 -54.572 7.063 1 27.57 ? C2B FAD 701 A 1 HETATM 11 O O2B FAD . . . C 2 -11.581 -55.565 6.706 1 27.28 ? O2B FAD 701 A 1 HETATM 12 C C1B FAD . . . C 2 -13.819 -55.176 7.56 1 30.24 ? C1B FAD 701 A 1 HETATM 13 N N9A FAD . . . C 2 -14.686 -55.609 6.488 1 30.62 ? N9A FAD 701 A 1 HETATM 14 C C8A FAD . . . C 2 -15.457 -54.841 5.66 1 31.81 ? C8A FAD 701 A 1 HETATM 15 N N7A FAD . . . C 2 -16.118 -55.555 4.782 1 30.35 ? N7A FAD 701 A 1 HETATM 16 C C5A FAD . . . C 2 -15.754 -56.868 5.05 1 30.7 ? C5A FAD 701 A 1 HETATM 17 C C6A FAD . . . C 2 -16.112 -58.098 4.469 1 27.41 ? C6A FAD 701 A 1 HETATM 18 N N6A FAD . . . C 2 -16.953 -58.219 3.448 1 30.61 ? N6A FAD 701 A 1 HETATM 19 N N1A FAD . . . C 2 -15.556 -59.214 4.99 1 26.78 ? N1A FAD 701 A 1 HETATM 20 C C2A FAD . . . C 2 -14.707 -59.09 6.017 1 32.85 ? C2A FAD 701 A 1 HETATM 21 N N3A FAD . . . C 2 -14.301 -57.992 6.643 1 27.99 ? N3A FAD 701 A 1 HETATM 22 C C4A FAD . . . C 2 -14.869 -56.906 6.102 1 28.58 ? C4A FAD 701 A 1 HETATM 23 N N1 FAD . . . C 2 -8.611 -44.308 -0.531 1 34.04 ? N1 FAD 701 A 1 HETATM 24 C C2 FAD . . . C 2 -8.495 -43.815 -1.77 1 31.67 ? C2 FAD 701 A 1 HETATM 25 O O2 FAD . . . C 2 -9.382 -43.981 -2.589 1 27.91 ? O2 FAD 701 A 1 HETATM 26 N N3 FAD . . . C 2 -7.382 -43.175 -2.192 1 31.15 ? N3 FAD 701 A 1 HETATM 27 C C4 FAD . . . C 2 -6.311 -42.964 -1.367 1 30.1 ? C4 FAD 701 A 1 HETATM 28 O O4 FAD . . . C 2 -5.343 -42.354 -1.781 1 26.88 ? O4 FAD 701 A 1 HETATM 29 C C4X FAD . . . C 2 -6.419 -43.395 -0.038 1 31.13 ? C4X FAD 701 A 1 HETATM 30 N N5 FAD . . . C 2 -5.433 -43.152 0.786 1 29.29 ? N5 FAD 701 A 1 HETATM 31 C C5X FAD . . . C 2 -5.613 -43.506 2.095 1 30.76 ? C5X FAD 701 A 1 HETATM 32 C C6 FAD . . . C 2 -4.607 -43.191 3.023 1 30.65 ? C6 FAD 701 A 1 HETATM 33 C C7 FAD . . . C 2 -4.755 -43.479 4.358 1 30.81 ? C7 FAD 701 A 1 HETATM 34 C C7M FAD . . . C 2 -3.672 -43.099 5.332 1 36.66 ? C7M FAD 701 A 1 HETATM 35 C C8 FAD . . . C 2 -5.919 -44.151 4.8 1 32.73 ? C8 FAD 701 A 1 HETATM 36 C C8M FAD . . . C 2 -6.116 -44.5 6.251 1 35.25 ? C8M FAD 701 A 1 HETATM 37 C C9 FAD . . . C 2 -6.869 -44.524 3.895 1 33.31 ? C9 FAD 701 A 1 HETATM 38 C C9A FAD . . . C 2 -6.761 -44.182 2.542 1 30.02 ? C9A FAD 701 A 1 HETATM 39 N N10 FAD . . . C 2 -7.751 -44.49 1.619 1 32.57 ? N10 FAD 701 A 1 HETATM 40 C C10 FAD . . . C 2 -7.638 -44.072 0.316 1 32.68 ? C10 FAD 701 A 1 HETATM 41 C C1' FAD . . . C 2 -8.955 -45.21 2.064 1 31.22 ? C1' FAD 701 A 1 HETATM 42 C C2' FAD . . . C 2 -8.61 -46.669 2.399 1 32.66 ? C2' FAD 701 A 1 HETATM 43 O O2' FAD . . . C 2 -8.353 -47.426 1.221 1 29.57 ? O2' FAD 701 A 1 HETATM 44 C C3' FAD . . . C 2 -9.707 -47.342 3.228 1 35.53 ? C3' FAD 701 A 1 HETATM 45 O O3' FAD . . . C 2 -9.452 -47.074 4.59 1 33.17 ? O3' FAD 701 A 1 HETATM 46 C C4' FAD . . . C 2 -9.809 -48.858 3.062 1 39.85 ? C4' FAD 701 A 1 HETATM 47 O O4' FAD . . . C 2 -10.283 -49.169 1.751 1 37.35 ? O4' FAD 701 A 1 HETATM 48 C C5' FAD . . . C 2 -10.71 -49.488 4.099 1 38.92 ? C5' FAD 701 A 1 HETATM 49 O O5' FAD . . . C 2 -11.968 -48.762 4.164 1 36.73 ? O5' FAD 701 A 1 HETATM 50 P P FAD . . . C 2 -12.501 -48.201 5.564 1 32.88 ? P FAD 701 A 1 HETATM 51 O O1P FAD . . . C 2 -11.386 -47.583 6.325 1 33.91 ? O1P FAD 701 A 1 HETATM 52 O O2P FAD . . . C 2 -13.708 -47.381 5.283 1 35.75 ? O2P FAD 701 A 1 HETATM 53 O O3P FAD . . . C 2 -12.957 -49.544 6.295 1 36.35 ? O3P FAD 701 A 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 320 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 53 #