data_8PON # _model_server_result.job_id izXlWQXxw2oYdkOT2suBPQ _model_server_result.datetime_utc '2025-06-30 09:37:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8pon # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":501}' # _entry.id 8PON # _exptl.entry_id 8PON _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 337.344 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-fluoranyl-2-[(3-phenylmethoxyphenyl)amino]benzoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.57 _cell.angle_gamma 90 _cell.entry_id 8PON _cell.length_a 80.117 _cell.length_b 61.591 _cell.length_c 111.292 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8PON _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 165 _struct_conn.ptnr1_auth_asym_id B _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 380 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id C _struct_conn.ptnr2_label_atom_id C1 _struct_conn.ptnr2_label_comp_id MYR _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id MYR _struct_conn.ptnr2_auth_seq_id 501 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.778 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C20 H16 F N O3' _chem_comp.formula_weight 337.344 _chem_comp.id ZUT _chem_comp.mon_nstd_flag . _chem_comp.name '4-fluoranyl-2-[(3-phenylmethoxyphenyl)amino]benzoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag F01 C02 ZUT sing 419 n n C02 C03 ZUT doub 420 n y C02 C07 ZUT sing 421 n y C03 C04 ZUT sing 422 n y C07 C06 ZUT doub 423 n y C11 C10 ZUT doub 424 n y C11 C12 ZUT sing 425 n y C10 C09 ZUT sing 426 n y C12 C13 ZUT doub 427 n y C04 C05 ZUT doub 428 n y C21 C22 ZUT doub 429 n y C21 C20 ZUT sing 430 n y C06 C05 ZUT sing 431 n y C06 N08 ZUT sing 432 n n C22 C17 ZUT sing 433 n y C09 N08 ZUT sing 434 n n C09 C14 ZUT doub 435 n y C13 C14 ZUT sing 436 n y C13 O15 ZUT sing 437 n n C20 C19 ZUT doub 438 n y C05 C23 ZUT sing 439 n n C17 C16 ZUT sing 440 n n C17 C18 ZUT doub 441 n y O15 C16 ZUT sing 442 n n C19 C18 ZUT sing 443 n y C23 O25 ZUT doub 444 n n C23 O24 ZUT sing 445 n n C10 H1 ZUT sing 446 n n C20 H2 ZUT sing 447 n n C21 H3 ZUT sing 448 n n C22 H4 ZUT sing 449 n n C03 H5 ZUT sing 450 n n C04 H6 ZUT sing 451 n n C07 H7 ZUT sing 452 n n C11 H8 ZUT sing 453 n n C12 H9 ZUT sing 454 n n C14 H10 ZUT sing 455 n n C16 H11 ZUT sing 456 n n C16 H12 ZUT sing 457 n n C18 H13 ZUT sing 458 n n C19 H14 ZUT sing 459 n n N08 H15 ZUT sing 460 n n O24 H16 ZUT sing 461 n n # _atom_sites.entry_id 8PON _atom_sites.fract_transf_matrix[1][1] 0.012482 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002783 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016236 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009206 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MYR B 1 501 1 MYR MYR . D 3 ZUT A 1 501 1 ZUT LIG . E 4 HOH B 1 601 5 HOH HOH . E 4 HOH B 2 602 1 HOH HOH . E 4 HOH B 3 603 4 HOH HOH . E 4 HOH B 4 604 16 HOH HOH . E 4 HOH B 5 605 10 HOH HOH . E 4 HOH B 6 606 6 HOH HOH . E 4 HOH B 7 607 13 HOH HOH . E 4 HOH B 8 608 8 HOH HOH . E 4 HOH B 9 609 2 HOH HOH . E 4 HOH B 10 610 3 HOH HOH . E 4 HOH B 11 611 7 HOH HOH . F 4 HOH A 1 601 11 HOH HOH . F 4 HOH A 2 602 12 HOH HOH . F 4 HOH A 3 603 9 HOH HOH . F 4 HOH A 4 604 14 HOH HOH . F 4 HOH A 5 605 15 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 ZUT . . . D 3 -6.663 11.841 33.069 1 57.44 ? C10 ZUT 501 A 1 HETATM 2 C C13 ZUT . . . D 3 -4.509 13.298 34.228 1 57.07 ? C13 ZUT 501 A 1 HETATM 3 C C17 ZUT . . . D 3 -0.943 14.241 34.742 1 57.81 ? C17 ZUT 501 A 1 HETATM 4 C C20 ZUT . . . D 3 1.321 15.951 34.24 1 54.82 ? C20 ZUT 501 A 1 HETATM 5 C C21 ZUT . . . D 3 1.282 14.639 33.704 1 56.42 ? C21 ZUT 501 A 1 HETATM 6 C C22 ZUT . . . D 3 0.164 13.787 33.963 1 55.58 ? C22 ZUT 501 A 1 HETATM 7 C C02 ZUT . . . D 3 -5.885 7.475 31.602 1 56.28 ? C02 ZUT 501 A 1 HETATM 8 C C03 ZUT . . . D 3 -5.828 6.198 32.178 1 55.79 ? C03 ZUT 501 A 1 HETATM 9 C C04 ZUT . . . D 3 -5.906 6.161 33.597 1 59.93 ? C04 ZUT 501 A 1 HETATM 10 C C05 ZUT . . . D 3 -6.043 7.351 34.365 1 57.13 ? C05 ZUT 501 A 1 HETATM 11 C C06 ZUT . . . D 3 -6.096 8.616 33.742 1 59.76 ? C06 ZUT 501 A 1 HETATM 12 C C07 ZUT . . . D 3 -6.015 8.689 32.307 1 58.4 ? C07 ZUT 501 A 1 HETATM 13 C C09 ZUT . . . D 3 -5.909 11.209 34.108 1 59.29 ? C09 ZUT 501 A 1 HETATM 14 C C11 ZUT . . . D 3 -6.33 13.143 32.613 1 56.43 ? C11 ZUT 501 A 1 HETATM 15 C C12 ZUT . . . D 3 -5.266 13.897 33.191 1 51.95 ? C12 ZUT 501 A 1 HETATM 16 C C14 ZUT . . . D 3 -4.813 11.972 34.673 1 57.19 ? C14 ZUT 501 A 1 HETATM 17 C C16 ZUT . . . D 3 -2.188 13.314 35.025 1 54.51 ? C16 ZUT 501 A 1 HETATM 18 C C18 ZUT . . . D 3 -0.897 15.558 35.266 1 56.1 ? C18 ZUT 501 A 1 HETATM 19 C C19 ZUT . . . D 3 0.215 16.407 35.023 1 56.25 ? C19 ZUT 501 A 1 HETATM 20 C C23 ZUT . . . D 3 -6.119 7.263 35.917 1 61.28 ? C23 ZUT 501 A 1 HETATM 21 F F01 ZUT . . . D 3 -5.798 7.538 30.186 1 57.81 ? F01 ZUT 501 A 1 HETATM 22 N N08 ZUT . . . D 3 -6.242 9.88 34.547 1 57.68 ? N08 ZUT 501 A 1 HETATM 23 O O15 ZUT . . . D 3 -3.414 14.001 34.818 1 58.13 ? O15 ZUT 501 A 1 HETATM 24 O O24 ZUT . . . D 3 -6.165 8.354 36.537 1 61.73 ? O24 ZUT 501 A 1 HETATM 25 O O25 ZUT . . . D 3 -6.117 6.122 36.449 1 67.12 -1 O25 ZUT 501 A 1 # _model_server_stats.io_time_ms 62 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 322 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 25 #