data_8PQM
#
_model_server_result.job_id            0Jrffh1sCY3JoZ0aB23oLg 
_model_server_result.datetime_utc      '2025-02-22 11:19:23' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8pqm 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":102}' 
#
_entry.id    8PQM 
#
_exptl.entry_id    8PQM 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8PQM 
_cell.length_a            28.31 
_cell.length_b            38.37 
_cell.length_c            66.71 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8PQM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C ASP 25 A ASP 21 1_555 A N MSE 26 A MSE 22 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.343 ? 
covale ? covale2 A C ASP 25 A ASP 21 1_555 A N MSE 26 A MSE 22 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.335 ? 
covale ? covale3 A C MSE 26 A MSE 22 1_555 A N ILE 27 A ILE 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.315 ? 
covale ? covale4 A C ALA 64 A ALA 60 1_555 A N MSE 65 A MSE 61 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale5 A C MSE 65 A MSE 61 1_555 A N GLY 66 A GLY 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? 
covale ? covale6 A C GLU 69 A GLU 65 1_555 A N MSE 70 A MSE 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? 
covale ? covale7 A C MSE 70 A MSE 66 1_555 A N LYS 71 A LYS 67 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.344 ? 
metalc ? metalc1 A OE2 GLU 46 A GLU 42 1_555 C NA NA . A NA 102 1_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.912 ? 
metalc ? metalc2 B NA NA . A NA 101 1_555 D O HOH . A HOH 224 4_455 ? ? ? ? B ? ? ? ? ? ? ? 2.673 ? 
metalc ? metalc3 B NA NA . A NA 101 1_555 D O HOH . A HOH 224 4_455 ? ? ? ? C ? ? ? ? ? ? ? 1.908 ? 
metalc ? metalc4 B NA NA . A NA 101 1_555 D O HOH . A HOH 243 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.972 ? 
metalc ? metalc5 B NA NA . A NA 101 1_555 D O HOH . A HOH 243 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.14 ? 
metalc ? metalc6 C NA NA . A NA 102 1_555 D O HOH . A HOH 226 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.088 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     8PQM 
_atom_sites.fract_transf_matrix[1][1]    0.035323 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.026062 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01499 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NA A 1 101 1 NA NA . 
C 2 NA A 1 102 2 NA NA . 
D 3 HOH A 1 201 53 HOH HOH . 
D 3 HOH A 2 202 51 HOH HOH . 
D 3 HOH A 3 203 72 HOH HOH . 
D 3 HOH A 4 204 31 HOH HOH . 
D 3 HOH A 5 205 9 HOH HOH . 
D 3 HOH A 6 206 62 HOH HOH . 
D 3 HOH A 7 207 63 HOH HOH . 
D 3 HOH A 8 208 83 HOH HOH . 
D 3 HOH A 9 209 12 HOH HOH . 
D 3 HOH A 10 210 10 HOH HOH . 
D 3 HOH A 11 211 22 HOH HOH . 
D 3 HOH A 12 212 24 HOH HOH . 
D 3 HOH A 13 213 23 HOH HOH . 
D 3 HOH A 14 214 35 HOH HOH . 
D 3 HOH A 15 215 59 HOH HOH . 
D 3 HOH A 16 216 39 HOH HOH . 
D 3 HOH A 17 217 81 HOH HOH . 
D 3 HOH A 18 218 66 HOH HOH . 
D 3 HOH A 19 219 2 HOH HOH . 
D 3 HOH A 20 220 33 HOH HOH . 
D 3 HOH A 21 221 80 HOH HOH . 
D 3 HOH A 22 222 7 HOH HOH . 
D 3 HOH A 23 223 67 HOH HOH . 
D 3 HOH A 24 224 16 HOH HOH . 
D 3 HOH A 25 225 19 HOH HOH . 
D 3 HOH A 26 226 56 HOH HOH . 
D 3 HOH A 27 227 36 HOH HOH . 
D 3 HOH A 28 228 27 HOH HOH . 
D 3 HOH A 29 229 43 HOH HOH . 
D 3 HOH A 30 230 44 HOH HOH . 
D 3 HOH A 31 231 82 HOH HOH . 
D 3 HOH A 32 232 74 HOH HOH . 
D 3 HOH A 33 233 14 HOH HOH . 
D 3 HOH A 34 234 20 HOH HOH . 
D 3 HOH A 35 235 41 HOH HOH . 
D 3 HOH A 36 236 76 HOH HOH . 
D 3 HOH A 37 237 37 HOH HOH . 
D 3 HOH A 38 238 28 HOH HOH . 
D 3 HOH A 39 239 4 HOH HOH . 
D 3 HOH A 40 240 40 HOH HOH . 
D 3 HOH A 41 241 29 HOH HOH . 
D 3 HOH A 42 242 17 HOH HOH . 
D 3 HOH A 43 243 85 HOH HOH . 
D 3 HOH A 44 244 25 HOH HOH . 
D 3 HOH A 45 245 1 HOH HOH . 
D 3 HOH A 46 246 64 HOH HOH . 
D 3 HOH A 47 247 77 HOH HOH . 
D 3 HOH A 48 248 75 HOH HOH . 
D 3 HOH A 49 249 32 HOH HOH . 
D 3 HOH A 50 250 21 HOH HOH . 
D 3 HOH A 51 251 3 HOH HOH . 
D 3 HOH A 52 252 6 HOH HOH . 
D 3 HOH A 53 253 11 HOH HOH . 
D 3 HOH A 54 254 8 HOH HOH . 
D 3 HOH A 55 255 65 HOH HOH . 
D 3 HOH A 56 256 50 HOH HOH . 
D 3 HOH A 57 257 5 HOH HOH . 
D 3 HOH A 58 258 34 HOH HOH . 
D 3 HOH A 59 259 58 HOH HOH . 
D 3 HOH A 60 260 52 HOH HOH . 
D 3 HOH A 61 261 47 HOH HOH . 
D 3 HOH A 62 262 46 HOH HOH . 
D 3 HOH A 63 263 61 HOH HOH . 
D 3 HOH A 64 264 70 HOH HOH . 
D 3 HOH A 65 265 49 HOH HOH . 
D 3 HOH A 66 266 30 HOH HOH . 
D 3 HOH A 67 267 69 HOH HOH . 
D 3 HOH A 68 268 71 HOH HOH . 
D 3 HOH A 69 269 38 HOH HOH . 
D 3 HOH A 70 270 73 HOH HOH . 
D 3 HOH A 71 271 87 HOH HOH . 
D 3 HOH A 72 272 86 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         C 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               -20.224 
_atom_site.Cartn_y               6.907 
_atom_site.Cartn_z               1.593 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        53.37 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           102 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           21 
_model_server_stats.create_model_time_ms    1 
_model_server_stats.query_time_ms           288 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           1 
#