data_8PQP
#
_model_server_result.job_id            iafKjkXSg-U9x5r9QqkrWA 
_model_server_result.datetime_utc      '2024-12-01 12:20:27' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8pqp 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":201}' 
#
_entry.id    8PQP 
#
_exptl.entry_id    8PQP 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              266.253 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,4-DIDEOXY-4-AZA-1-(S)-(9-DEAZAHYPOXANTHIN-9-YL)-D-RIBITOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            8PQP 
_cell.length_a            93.573 
_cell.length_b            93.573 
_cell.length_c            63.124 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8PQP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_struct_conn.conn_type_id                   disulf 
_struct_conn.details                        ? 
_struct_conn.id                             disulf1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            SG 
_struct_conn.ptnr1_label_comp_id            CYS 
_struct_conn.ptnr1_label_seq_id             109 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             CYS 
_struct_conn.ptnr1_auth_seq_id              109 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            B 
_struct_conn.ptnr2_label_atom_id            SG 
_struct_conn.ptnr2_label_comp_id            CYS 
_struct_conn.ptnr2_label_seq_id             109 
_struct_conn.ptnr2_auth_asym_id             B 
_struct_conn.ptnr2_auth_comp_id             CYS 
_struct_conn.ptnr2_auth_seq_id              109 
_struct_conn.ptnr2_symmetry                 4_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                2.06 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C11 H14 N4 O4' 
_chem_comp.formula_weight    266.253 
_chem_comp.id                IMH 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,4-DIDEOXY-4-AZA-1-(S)-(9-DEAZAHYPOXANTHIN-9-YL)-D-RIBITOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'Forodesine;Immucillin H' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O5' C5' IMH sing 173 n n 
O5' "HO'5" IMH sing 174 n n 
C5' C4' IMH sing 175 n n 
C5' "H5'1" IMH sing 176 n n 
C5' "H5'2" IMH sing 177 n n 
C4' N4' IMH sing 178 n n 
C4' C3' IMH sing 179 n n 
C4' H4' IMH sing 180 n n 
N4' C1' IMH sing 181 n n 
N4' "HN'4" IMH sing 182 n n 
C3' O3' IMH sing 183 n n 
C3' C2' IMH sing 184 n n 
C3' H3' IMH sing 185 n n 
O3' "HO'3" IMH sing 186 n n 
C2' O2' IMH sing 187 n n 
C2' C1' IMH sing 188 n n 
C2' H2' IMH sing 189 n n 
O2' "HO'2" IMH sing 190 n n 
C1' C9 IMH sing 191 n n 
C1' H1' IMH sing 192 n n 
C9 C8 IMH doub 193 n y 
C9 C4 IMH sing 194 n y 
C8 N7 IMH sing 195 n y 
C8 H8 IMH sing 196 n n 
N7 C5 IMH sing 197 n y 
N7 HN7 IMH sing 198 n n 
C5 C6 IMH sing 199 n n 
C5 C4 IMH doub 200 n y 
C6 O6 IMH doub 201 n n 
C6 N1 IMH sing 202 n n 
N1 C2 IMH sing 203 n n 
C2 N3 IMH doub 204 n n 
C2 H2 IMH sing 205 n n 
N3 C4 IMH sing 206 n n 
N1 H1 IMH sing 207 n n 
#
_atom_sites.entry_id                     8PQP 
_atom_sites.fract_transf_matrix[1][1]    0.010687 
_atom_sites.fract_transf_matrix[1][2]    0.00617 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01234 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015842 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 IMH A 1 201 201 IMH 00Z . 
D 3 HOH A 1 301 92 HOH HOH . 
D 3 HOH A 2 302 74 HOH HOH . 
D 3 HOH A 3 303 82 HOH HOH . 
D 3 HOH A 4 304 43 HOH HOH . 
D 3 HOH A 5 305 3 HOH HOH . 
D 3 HOH A 6 306 90 HOH HOH . 
D 3 HOH A 7 307 10 HOH HOH . 
D 3 HOH A 8 308 76 HOH HOH . 
D 3 HOH A 9 309 57 HOH HOH . 
D 3 HOH A 10 310 37 HOH HOH . 
D 3 HOH A 11 311 7 HOH HOH . 
D 3 HOH A 12 312 22 HOH HOH . 
D 3 HOH A 13 313 36 HOH HOH . 
D 3 HOH A 14 314 39 HOH HOH . 
D 3 HOH A 15 315 40 HOH HOH . 
D 3 HOH A 16 316 64 HOH HOH . 
D 3 HOH A 17 317 83 HOH HOH . 
D 3 HOH A 18 318 46 HOH HOH . 
D 3 HOH A 19 319 4 HOH HOH . 
D 3 HOH A 20 320 62 HOH HOH . 
D 3 HOH A 21 321 5 HOH HOH . 
D 3 HOH A 22 322 56 HOH HOH . 
D 3 HOH A 23 323 24 HOH HOH . 
D 3 HOH A 24 324 11 HOH HOH . 
D 3 HOH A 25 325 8 HOH HOH . 
D 3 HOH A 26 326 49 HOH HOH . 
D 3 HOH A 27 327 63 HOH HOH . 
D 3 HOH A 28 328 21 HOH HOH . 
D 3 HOH A 29 329 41 HOH HOH . 
D 3 HOH A 30 330 1 HOH HOH . 
D 3 HOH A 31 331 53 HOH HOH . 
D 3 HOH A 32 332 16 HOH HOH . 
D 3 HOH A 33 333 32 HOH HOH . 
D 3 HOH A 34 334 19 HOH HOH . 
D 3 HOH A 35 335 33 HOH HOH . 
D 3 HOH A 36 336 59 HOH HOH . 
D 3 HOH A 37 337 23 HOH HOH . 
D 3 HOH A 38 338 2 HOH HOH . 
D 3 HOH A 39 339 18 HOH HOH . 
D 3 HOH A 40 340 28 HOH HOH . 
D 3 HOH A 41 341 9 HOH HOH . 
D 3 HOH A 42 342 58 HOH HOH . 
D 3 HOH A 43 343 69 HOH HOH . 
D 3 HOH A 44 344 75 HOH HOH . 
D 3 HOH A 45 345 15 HOH HOH . 
D 3 HOH A 46 346 20 HOH HOH . 
D 3 HOH A 47 347 55 HOH HOH . 
D 3 HOH A 48 348 79 HOH HOH . 
D 3 HOH A 49 349 26 HOH HOH . 
D 3 HOH A 50 350 61 HOH HOH . 
D 3 HOH A 51 351 25 HOH HOH . 
D 3 HOH A 52 352 50 HOH HOH . 
D 3 HOH A 53 353 70 HOH HOH . 
D 3 HOH A 54 354 68 HOH HOH . 
D 3 HOH A 55 355 47 HOH HOH . 
D 3 HOH A 56 356 17 HOH HOH . 
D 3 HOH A 57 357 93 HOH HOH . 
D 3 HOH A 58 358 14 HOH HOH . 
E 3 HOH B 1 201 84 HOH HOH . 
E 3 HOH B 2 202 51 HOH HOH . 
E 3 HOH B 3 203 87 HOH HOH . 
E 3 HOH B 4 204 66 HOH HOH . 
E 3 HOH B 5 205 85 HOH HOH . 
E 3 HOH B 6 206 60 HOH HOH . 
E 3 HOH B 7 207 31 HOH HOH . 
E 3 HOH B 8 208 86 HOH HOH . 
E 3 HOH B 9 209 67 HOH HOH . 
E 3 HOH B 10 210 80 HOH HOH . 
E 3 HOH B 11 211 48 HOH HOH . 
E 3 HOH B 12 212 12 HOH HOH . 
E 3 HOH B 13 213 30 HOH HOH . 
E 3 HOH B 14 214 77 HOH HOH . 
E 3 HOH B 15 215 81 HOH HOH . 
E 3 HOH B 16 216 71 HOH HOH . 
E 3 HOH B 17 217 13 HOH HOH . 
E 3 HOH B 18 218 27 HOH HOH . 
E 3 HOH B 19 219 45 HOH HOH . 
E 3 HOH B 20 220 78 HOH HOH . 
E 3 HOH B 21 221 6 HOH HOH . 
E 3 HOH B 22 222 88 HOH HOH . 
E 3 HOH B 23 223 38 HOH HOH . 
E 3 HOH B 24 224 65 HOH HOH . 
E 3 HOH B 25 225 72 HOH HOH . 
E 3 HOH B 26 226 35 HOH HOH . 
E 3 HOH B 27 227 89 HOH HOH . 
E 3 HOH B 28 228 44 HOH HOH . 
E 3 HOH B 29 229 34 HOH HOH . 
E 3 HOH B 30 230 54 HOH HOH . 
E 3 HOH B 31 231 52 HOH HOH . 
E 3 HOH B 32 232 42 HOH HOH . 
E 3 HOH B 33 233 73 HOH HOH . 
E 3 HOH B 34 234 91 HOH HOH . 
E 3 HOH B 35 235 29 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O5' IMH . . . C 2 -9.48 -21.381 8.4 1 64.26 ? O5' IMH 201 A 1 
HETATM 2 C C5' IMH . . . C 2 -8.117 -21.776 8.402 1 79.04 ? C5' IMH 201 A 1 
HETATM 3 C C4' IMH . . . C 2 -7.224 -20.604 8.761 1 79.11 ? C4' IMH 201 A 1 
HETATM 4 N N4' IMH . . . C 2 -7.965 -19.46 9.32 1 84.93 ? N4' IMH 201 A 1 
HETATM 5 C C3' IMH . . . C 2 -6.149 -20.959 9.798 1 82.55 ? C3' IMH 201 A 1 
HETATM 6 O O3' IMH . . . C 2 -4.891 -21.243 9.19 1 57.39 ? O3' IMH 201 A 1 
HETATM 7 C C2' IMH . . . C 2 -6.135 -19.787 10.788 1 96.46 ? C2' IMH 201 A 1 
HETATM 8 O O2' IMH . . . C 2 -5.202 -18.81 10.373 1 111.63 ? O2' IMH 201 A 1 
HETATM 9 C C1' IMH . . . C 2 -7.54 -19.142 10.691 1 91.2 ? C1' IMH 201 A 1 
HETATM 10 C C9 IMH . . . C 2 -8.569 -19.556 11.692 1 91.87 ? C9 IMH 201 A 1 
HETATM 11 C C8 IMH . . . C 2 -9.9 -19.749 11.418 1 93.93 ? C8 IMH 201 A 1 
HETATM 12 N N7 IMH . . . C 2 -10.546 -20.119 12.563 1 95.42 ? N7 IMH 201 A 1 
HETATM 13 C C5 IMH . . . C 2 -9.629 -20.158 13.584 1 95.83 ? C5 IMH 201 A 1 
HETATM 14 C C6 IMH . . . C 2 -9.778 -20.481 14.956 1 91.93 ? C6 IMH 201 A 1 
HETATM 15 O O6 IMH . . . C 2 -10.826 -20.808 15.524 1 90.13 ? O6 IMH 201 A 1 
HETATM 16 N N1 IMH . . . C 2 -8.572 -20.394 15.656 1 92.95 ? N1 IMH 201 A 1 
HETATM 17 C C2 IMH . . . C 2 -7.39 -20.044 15.101 1 95.61 ? C2 IMH 201 A 1 
HETATM 18 N N3 IMH . . . C 2 -7.246 -19.745 13.834 1 93.74 ? N3 IMH 201 A 1 
HETATM 19 C C4 IMH . . . C 2 -8.383 -19.801 13.049 1 92.68 ? C4 IMH 201 A 1 
#
_model_server_stats.io_time_ms              24 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           309 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           19 
#