data_8PRR # _model_server_result.job_id gTosXEIKd7SQM4rleZtfGQ _model_server_result.datetime_utc '2024-10-10 09:26:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8prr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":102}' # _entry.id 8PRR # _exptl.entry_id 8PRR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.933 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COBALT (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8PRR _cell.length_a 55.83 _cell.length_b 55.83 _cell.length_c 108.45 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8PRR _symmetry.cell_setting ? _symmetry.Int_Tables_number 97 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -y,x,z 0 -1 0 1 0 0 0 0 1 0 0 0 4 'crystal symmetry operation' 4_555 y,-x,z 0 1 0 -1 0 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 28 A HIS 24 1_555 C CO CO . A CO 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.153 ? metalc ? metalc2 A NE2 HIS 28 A HIS 24 1_555 C CO CO . A CO 102 8_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.197 ? metalc ? metalc3 A NE2 HIS 68 A HIS 64 1_555 B CO CO . A CO 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? metalc ? metalc4 A NE2 HIS 68 A HIS 64 1_555 B CO CO . A CO 101 6_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? metalc ? metalc5 B CO CO . A CO 101 1_555 D O HOH . A HOH 202 8_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? metalc ? metalc6 B CO CO . A CO 101 1_555 D O HOH . A HOH 227 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? metalc ? metalc7 B CO CO . A CO 101 1_555 D O HOH . A HOH 227 6_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.228 ? metalc ? metalc8 C CO CO . A CO 102 1_555 D O HOH . A HOH 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? metalc ? metalc9 C CO CO . A CO 102 1_555 D O HOH . A HOH 204 8_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? metalc ? metalc10 C CO CO . A CO 102 1_555 D O HOH . A HOH 237 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? metalc ? metalc11 C CO CO . A CO 102 1_555 D O HOH . A HOH 237 8_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.228 ? # _chem_comp.formula 'Co 2' _chem_comp.formula_weight 58.933 _chem_comp.id CO _chem_comp.mon_nstd_flag . _chem_comp.name 'COBALT (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8PRR _atom_sites.fract_transf_matrix[1][1] 0.017912 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017912 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009221 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CO A 1 101 1 CO CO . C 2 CO A 1 102 2 CO CO . D 3 HOH A 1 201 56 HOH HOH . D 3 HOH A 2 202 31 HOH HOH . D 3 HOH A 3 203 67 HOH HOH . D 3 HOH A 4 204 46 HOH HOH . D 3 HOH A 5 205 66 HOH HOH . D 3 HOH A 6 206 4 HOH HOH . D 3 HOH A 7 207 11 HOH HOH . D 3 HOH A 8 208 21 HOH HOH . D 3 HOH A 9 209 9 HOH HOH . D 3 HOH A 10 210 10 HOH HOH . D 3 HOH A 11 211 3 HOH HOH . D 3 HOH A 12 212 53 HOH HOH . D 3 HOH A 13 213 27 HOH HOH . D 3 HOH A 14 214 19 HOH HOH . D 3 HOH A 15 215 38 HOH HOH . D 3 HOH A 16 216 43 HOH HOH . D 3 HOH A 17 217 13 HOH HOH . D 3 HOH A 18 218 57 HOH HOH . D 3 HOH A 19 219 22 HOH HOH . D 3 HOH A 20 220 14 HOH HOH . D 3 HOH A 21 221 42 HOH HOH . D 3 HOH A 22 222 16 HOH HOH . D 3 HOH A 23 223 68 HOH HOH . D 3 HOH A 24 224 30 HOH HOH . D 3 HOH A 25 225 28 HOH HOH . D 3 HOH A 26 226 8 HOH HOH . D 3 HOH A 27 227 1 HOH HOH . D 3 HOH A 28 228 6 HOH HOH . D 3 HOH A 29 229 15 HOH HOH . D 3 HOH A 30 230 29 HOH HOH . D 3 HOH A 31 231 18 HOH HOH . D 3 HOH A 32 232 26 HOH HOH . D 3 HOH A 33 233 54 HOH HOH . D 3 HOH A 34 234 12 HOH HOH . D 3 HOH A 35 235 47 HOH HOH . D 3 HOH A 36 236 33 HOH HOH . D 3 HOH A 37 237 2 HOH HOH . D 3 HOH A 38 238 50 HOH HOH . D 3 HOH A 39 239 48 HOH HOH . D 3 HOH A 40 240 62 HOH HOH . D 3 HOH A 41 241 35 HOH HOH . D 3 HOH A 42 242 32 HOH HOH . D 3 HOH A 43 243 51 HOH HOH . D 3 HOH A 44 244 61 HOH HOH . D 3 HOH A 45 245 5 HOH HOH . D 3 HOH A 46 246 37 HOH HOH . D 3 HOH A 47 247 39 HOH HOH . D 3 HOH A 48 248 40 HOH HOH . D 3 HOH A 49 249 7 HOH HOH . D 3 HOH A 50 250 55 HOH HOH . D 3 HOH A 51 251 20 HOH HOH . D 3 HOH A 52 252 41 HOH HOH . D 3 HOH A 53 253 45 HOH HOH . D 3 HOH A 54 254 44 HOH HOH . D 3 HOH A 55 255 34 HOH HOH . D 3 HOH A 56 256 49 HOH HOH . D 3 HOH A 57 257 52 HOH HOH . D 3 HOH A 58 258 36 HOH HOH . D 3 HOH A 59 259 60 HOH HOH . D 3 HOH A 60 260 24 HOH HOH . D 3 HOH A 61 261 63 HOH HOH . D 3 HOH A 62 262 64 HOH HOH . D 3 HOH A 63 263 59 HOH HOH . D 3 HOH A 64 264 23 HOH HOH . D 3 HOH A 65 265 65 HOH HOH . D 3 HOH A 66 266 25 HOH HOH . D 3 HOH A 67 267 58 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CO _atom_site.label_atom_id CO _atom_site.label_comp_id CO _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x -10.056 _atom_site.Cartn_y 10.052 _atom_site.Cartn_z -0.028 _atom_site.occupancy 0.5 _atom_site.B_iso_or_equiv 28.97 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CO _atom_site.auth_comp_id CO _atom_site.auth_seq_id 102 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 45 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 264 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #