data_8PS1 # _model_server_result.job_id SUar14ViwD2aSg5OwXRW9Q _model_server_result.datetime_utc '2024-12-26 11:23:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ps1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":2102}' # _entry.id 8PS1 # _exptl.entry_id 8PS1 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 767.534 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COENZYME A' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8PS1 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8PS1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 C C HIS 1807 G HIS 1807 1_555 C N J8W 1808 G J8W 1808 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale2 C C J8W 1808 G J8W 1808 1_555 C N LEU 1809 G LEU 1809 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? # _chem_comp.formula 'C21 H36 N7 O16 P3 S' _chem_comp.formula_weight 767.534 _chem_comp.id COA _chem_comp.mon_nstd_flag . _chem_comp.name 'COENZYME A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1A C2A COA sing 70 n y N1A C6A COA doub 71 n y C2A N3A COA doub 72 n y C2A H2A COA sing 73 n n N3A C4A COA sing 74 n y C4A C5A COA doub 75 n y C4A N9A COA sing 76 n y C5A C6A COA sing 77 n y C5A N7A COA sing 78 n y C6A N6A COA sing 79 n n N6A H61A COA sing 80 n n N6A H62A COA sing 81 n n N7A C8A COA doub 82 n y C8A N9A COA sing 83 n y C8A H8A COA sing 84 n n N9A C1B COA sing 85 n n C1B C2B COA sing 86 n n C1B O4B COA sing 87 n n C1B H1B COA sing 88 n n C2B O2B COA sing 89 n n C2B C3B COA sing 90 n n C2B H2B COA sing 91 n n O2B HO2A COA sing 92 n n C3B O3B COA sing 93 n n C3B C4B COA sing 94 n n C3B H3B COA sing 95 n n O3B P3B COA sing 96 n n P3B O7A COA doub 97 n n P3B O8A COA sing 98 n n P3B O9A COA sing 99 n n O8A HOA8 COA sing 100 n n O9A HOA9 COA sing 101 n n C4B O4B COA sing 102 n n C4B C5B COA sing 103 n n C4B H4B COA sing 104 n n C5B O5B COA sing 105 n n C5B H51A COA sing 106 n n C5B H52A COA sing 107 n n O5B P1A COA sing 108 n n P1A O1A COA doub 109 n n P1A O2A COA sing 110 n n P1A O3A COA sing 111 n n O2A HOA2 COA sing 112 n n O3A P2A COA sing 113 n n P2A O4A COA doub 114 n n P2A O5A COA sing 115 n n P2A O6A COA sing 116 n n O5A HOA5 COA sing 117 n n O6A CCP COA sing 118 n n CBP CCP COA sing 119 n n CBP CDP COA sing 120 n n CBP CEP COA sing 121 n n CBP CAP COA sing 122 n n CCP H121 COA sing 123 n n CCP H122 COA sing 124 n n CDP H131 COA sing 125 n n CDP H132 COA sing 126 n n CDP H133 COA sing 127 n n CEP H141 COA sing 128 n n CEP H142 COA sing 129 n n CEP H143 COA sing 130 n n CAP OAP COA sing 131 n n CAP C9P COA sing 132 n n CAP H10 COA sing 133 n n OAP HO1 COA sing 134 n n C9P O9P COA doub 135 n n C9P N8P COA sing 136 n n N8P C7P COA sing 137 n n N8P HN8 COA sing 138 n n C7P C6P COA sing 139 n n C7P H71 COA sing 140 n n C7P H72 COA sing 141 n n C6P C5P COA sing 142 n n C6P H61 COA sing 143 n n C6P H62 COA sing 144 n n C5P O5P COA doub 145 n n C5P N4P COA sing 146 n n N4P C3P COA sing 147 n n N4P HN4 COA sing 148 n n C3P C2P COA sing 149 n n C3P H31 COA sing 150 n n C3P H32 COA sing 151 n n C2P S1P COA sing 152 n n C2P H21 COA sing 153 n n C2P H22 COA sing 154 n n S1P HS1 COA sing 155 n n # _atom_sites.entry_id 8PS1 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 NAP A 1 1901 1901 NAP NAP . E 4 FMN G 1 2101 2101 FMN FMN . F 5 COA G 1 2102 2301 COA COA . G 3 NAP G 1 2103 2401 NAP NAP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1A COA . . . F 5 65.404 177.692 119.155 1 152.28 ? N1A COA 2102 G 1 HETATM 2 C C2A COA . . . F 5 64.588 176.861 119.82 1 146.47 ? C2A COA 2102 G 1 HETATM 3 N N3A COA . . . F 5 64.754 175.569 120.103 1 157.19 ? N3A COA 2102 G 1 HETATM 4 C C4A COA . . . F 5 65.926 175.121 119.617 1 167.07 ? C4A COA 2102 G 1 HETATM 5 C C5A COA . . . F 5 66.863 175.849 118.91 1 161.5 ? C5A COA 2102 G 1 HETATM 6 C C6A COA . . . F 5 66.574 177.206 118.666 1 158.58 ? C6A COA 2102 G 1 HETATM 7 N N6A COA . . . F 5 67.403 178.026 118.025 1 156.78 ? N6A COA 2102 G 1 HETATM 8 N N7A COA . . . F 5 67.946 175.048 118.574 1 165.02 ? N7A COA 2102 G 1 HETATM 9 C C8A COA . . . F 5 67.656 173.871 119.077 1 172.78 ? C8A COA 2102 G 1 HETATM 10 N N9A COA . . . F 5 66.431 173.851 119.718 1 179.04 ? N9A COA 2102 G 1 HETATM 11 C C1B COA . . . F 5 65.784 172.729 120.42 1 192.09 ? C1B COA 2102 G 1 HETATM 12 C C2B COA . . . F 5 64.703 172.001 119.625 1 204.85 ? C2B COA 2102 G 1 HETATM 13 O O2B COA . . . F 5 63.699 171.504 120.484 1 192.64 ? O2B COA 2102 G 1 HETATM 14 C C3B COA . . . F 5 65.514 170.901 118.925 1 217.18 ? C3B COA 2102 G 1 HETATM 15 O O3B COA . . . F 5 64.688 169.779 118.546 1 212.4 ? O3B COA 2102 G 1 HETATM 16 P P3B COA . . . F 5 64.76 169.156 117.028 1 202.03 ? P3B COA 2102 G 1 HETATM 17 O O7A COA . . . F 5 65.637 167.919 117.116 1 194.59 ? O7A COA 2102 G 1 HETATM 18 O O8A COA . . . F 5 65.329 170.18 116.06 1 189.74 ? O8A COA 2102 G 1 HETATM 19 O O9A COA . . . F 5 63.326 168.795 116.675 1 184.17 ? O9A COA 2102 G 1 HETATM 20 C C4B COA . . . F 5 66.529 170.533 120.011 1 211.62 ? C4B COA 2102 G 1 HETATM 21 O O4B COA . . . F 5 66.766 171.767 120.742 1 198.4 ? O4B COA 2102 G 1 HETATM 22 C C5B COA . . . F 5 67.856 169.967 119.544 1 217.51 ? C5B COA 2102 G 1 HETATM 23 O O5B COA . . . F 5 68.276 170.588 118.285 1 218.88 ? O5B COA 2102 G 1 HETATM 24 P P1A COA . . . F 5 69.798 170.539 117.743 1 205.32 ? P1A COA 2102 G 1 HETATM 25 O O1A COA . . . F 5 69.944 171.484 116.592 1 196.25 ? O1A COA 2102 G 1 HETATM 26 O O2A COA . . . F 5 70.211 169.119 117.534 1 187.02 ? O2A COA 2102 G 1 HETATM 27 O O3A COA . . . F 5 70.617 171.142 118.988 1 197.78 ? O3A COA 2102 G 1 HETATM 28 P P2A COA . . . F 5 72.103 170.916 119.558 1 188.98 ? P2A COA 2102 G 1 HETATM 29 O O4A COA . . . F 5 72.031 170.636 121.024 1 178.76 ? O4A COA 2102 G 1 HETATM 30 O O5A COA . . . F 5 72.802 169.926 118.685 1 172.01 ? O5A COA 2102 G 1 HETATM 31 O O6A COA . . . F 5 72.803 172.355 119.337 1 182.79 ? O6A COA 2102 G 1 HETATM 32 C CBP COA . . . F 5 72.91 174.53 120.484 1 167.67 ? CBP COA 2102 G 1 HETATM 33 C CCP COA . . . F 5 72.078 173.609 119.579 1 175.59 ? CCP COA 2102 G 1 HETATM 34 C CDP COA . . . F 5 72.887 173.963 121.917 1 170.55 ? CDP COA 2102 G 1 HETATM 35 C CEP COA . . . F 5 72.26 175.925 120.485 1 159.37 ? CEP COA 2102 G 1 HETATM 36 C CAP COA . . . F 5 74.372 174.649 120.002 1 156.39 ? CAP COA 2102 G 1 HETATM 37 O OAP COA . . . F 5 74.398 174.835 118.59 1 151.1 ? OAP COA 2102 G 1 HETATM 38 C C9P COA . . . F 5 75.173 175.761 120.676 1 141.56 ? C9P COA 2102 G 1 HETATM 39 O O9P COA . . . F 5 75.532 175.631 121.847 1 132.22 ? O9P COA 2102 G 1 HETATM 40 N N8P COA . . . F 5 75.458 176.833 119.944 1 125.94 ? N8P COA 2102 G 1 HETATM 41 C C7P COA . . . F 5 76.103 178.033 120.464 1 117.29 ? C7P COA 2102 G 1 HETATM 42 C C6P COA . . . F 5 77.597 178.013 120.258 1 116.99 ? C6P COA 2102 G 1 HETATM 43 C C5P COA . . . F 5 78.252 179.334 120.607 1 118.41 ? C5P COA 2102 G 1 HETATM 44 O O5P COA . . . F 5 77.753 180.398 120.238 1 93.71 ? O5P COA 2102 G 1 HETATM 45 N N4P COA . . . F 5 79.392 179.276 121.32 1 133.05 ? N4P COA 2102 G 1 HETATM 46 C C3P COA . . . F 5 80.251 180.415 121.623 1 132.71 ? C3P COA 2102 G 1 HETATM 47 C C2P COA . . . F 5 79.654 181.336 122.653 1 124.36 ? C2P COA 2102 G 1 HETATM 48 S S1P COA . . . F 5 80.235 183.041 122.464 1 108.47 ? S1P COA 2102 G 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 55 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 48 #