data_8PS2
#
_model_server_result.job_id            yQBT_Q4_xX-nfnD2SV2ztw 
_model_server_result.datetime_utc      '2024-10-19 12:34:28' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8ps2 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":2101}' 
#
_entry.id    8PS2 
#
_exptl.entry_id    8PS2 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              456.344 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN MONONUCLEOTIDE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8PS2 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8PS2 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_struct_conn.conn_type_id                   covale 
_struct_conn.details                        ? 
_struct_conn.id                             covale1 
_struct_conn.ptnr1_label_asym_id            B 
_struct_conn.ptnr1_label_atom_id            CB 
_struct_conn.ptnr1_label_comp_id            SER 
_struct_conn.ptnr1_label_seq_id             180 
_struct_conn.ptnr1_auth_asym_id             B 
_struct_conn.ptnr1_auth_comp_id             SER 
_struct_conn.ptnr1_auth_seq_id              180 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            D 
_struct_conn.ptnr2_label_atom_id            O23 
_struct_conn.ptnr2_label_comp_id            A3Z 
_struct_conn.ptnr2_label_seq_id             . 
_struct_conn.ptnr2_auth_asym_id             B 
_struct_conn.ptnr2_auth_comp_id             A3Z 
_struct_conn.ptnr2_auth_seq_id              1901 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                1.395 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C17 H21 N4 O9 P' 
_chem_comp.formula_weight    456.344 
_chem_comp.id                FMN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN MONONUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'RIBOFLAVIN MONOPHOSPHATE' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 FMN sing 136 n n 
N1 C10 FMN doub 137 n n 
C2 O2 FMN doub 138 n n 
C2 N3 FMN sing 139 n n 
N3 C4 FMN sing 140 n n 
N3 HN3 FMN sing 141 n n 
C4 O4 FMN doub 142 n n 
C4 C4A FMN sing 143 n n 
C4A N5 FMN doub 144 n n 
C4A C10 FMN sing 145 n n 
N5 C5A FMN sing 146 n n 
C5A C6 FMN doub 147 n y 
C5A C9A FMN sing 148 n y 
C6 C7 FMN sing 149 n y 
C6 H6 FMN sing 150 n n 
C7 C7M FMN sing 151 n n 
C7 C8 FMN doub 152 n y 
C7M HM71 FMN sing 153 n n 
C7M HM72 FMN sing 154 n n 
C7M HM73 FMN sing 155 n n 
C8 C8M FMN sing 156 n n 
C8 C9 FMN sing 157 n y 
C8M HM81 FMN sing 158 n n 
C8M HM82 FMN sing 159 n n 
C8M HM83 FMN sing 160 n n 
C9 C9A FMN doub 161 n y 
C9 H9 FMN sing 162 n n 
C9A N10 FMN sing 163 n n 
N10 C10 FMN sing 164 n n 
N10 C1' FMN sing 165 n n 
C1' C2' FMN sing 166 n n 
C1' "H1'1" FMN sing 167 n n 
C1' "H1'2" FMN sing 168 n n 
C2' O2' FMN sing 169 n n 
C2' C3' FMN sing 170 n n 
C2' H2' FMN sing 171 n n 
O2' HO2' FMN sing 172 n n 
C3' O3' FMN sing 173 n n 
C3' C4' FMN sing 174 n n 
C3' H3' FMN sing 175 n n 
O3' HO3' FMN sing 176 n n 
C4' O4' FMN sing 177 n n 
C4' C5' FMN sing 178 n n 
C4' H4' FMN sing 179 n n 
O4' HO4' FMN sing 180 n n 
C5' O5' FMN sing 181 n n 
C5' "H5'1" FMN sing 182 n n 
C5' "H5'2" FMN sing 183 n n 
O5' P FMN sing 184 n n 
P O1P FMN doub 185 n n 
P O2P FMN sing 186 n n 
P O3P FMN sing 187 n n 
O2P HOP2 FMN sing 188 n n 
O3P HOP3 FMN sing 189 n n 
#
_atom_sites.entry_id                     8PS2 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 3 A3Z B 1 1901 180 A3Z PER . 
E 4 FMN G 1 2101 2101 FMN FMN . 
F 5 MLC G 1 2102 2201 MLC MLC . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 FMN . . . E 4 144.146 108.591 97.689 1 36.94 ? N1 FMN 2101 G 1 
HETATM 2 C C2 FMN . . . E 4 143.084 109.331 98.066 1 36.91 ? C2 FMN 2101 G 1 
HETATM 3 O O2 FMN . . . E 4 141.964 109.098 97.579 1 40.61 ? O2 FMN 2101 G 1 
HETATM 4 N N3 FMN . . . E 4 143.166 110.286 98.97 1 32.66 ? N3 FMN 2101 G 1 
HETATM 5 C C4 FMN . . . E 4 144.296 110.592 99.567 1 31.49 ? C4 FMN 2101 G 1 
HETATM 6 O O4 FMN . . . E 4 144.283 111.523 100.387 1 36.66 ? O4 FMN 2101 G 1 
HETATM 7 C C4A FMN . . . E 4 145.513 109.833 99.245 1 31.72 ? C4A FMN 2101 G 1 
HETATM 8 N N5 FMN . . . E 4 146.718 110.071 99.784 1 32.05 ? N5 FMN 2101 G 1 
HETATM 9 C C5A FMN . . . E 4 147.787 109.334 99.398 1 32.7 ? C5A FMN 2101 G 1 
HETATM 10 C C6 FMN . . . E 4 149.02 109.616 99.919 1 33.94 ? C6 FMN 2101 G 1 
HETATM 11 C C7 FMN . . . E 4 150.124 108.917 99.501 1 35.34 ? C7 FMN 2101 G 1 
HETATM 12 C C7M FMN . . . E 4 151.442 109.256 100.074 1 36.62 ? C7M FMN 2101 G 1 
HETATM 13 C C8 FMN . . . E 4 150.013 107.85 98.498 1 37.15 ? C8 FMN 2101 G 1 
HETATM 14 C C8M FMN . . . E 4 151.175 107.026 98.058 1 39.02 ? C8M FMN 2101 G 1 
HETATM 15 C C9 FMN . . . E 4 148.797 107.569 97.977 1 35.57 ? C9 FMN 2101 G 1 
HETATM 16 C C9A FMN . . . E 4 147.685 108.266 98.389 1 32.67 ? C9A FMN 2101 G 1 
HETATM 17 N N10 FMN . . . E 4 146.456 108.004 97.825 1 32.55 ? N10 FMN 2101 G 1 
HETATM 18 C C10 FMN . . . E 4 145.365 108.784 98.224 1 34.42 ? C10 FMN 2101 G 1 
HETATM 19 C C1' FMN . . . E 4 146.291 106.963 96.824 1 31.94 ? C1' FMN 2101 G 1 
HETATM 20 C C2' FMN . . . E 4 146.59 107.565 95.461 1 30.06 ? C2' FMN 2101 G 1 
HETATM 21 O O2' FMN . . . E 4 145.604 108.567 95.235 1 29.18 ? O2' FMN 2101 G 1 
HETATM 22 C C3' FMN . . . E 4 146.595 106.453 94.412 1 29 ? C3' FMN 2101 G 1 
HETATM 23 O O3' FMN . . . E 4 145.491 105.527 94.581 1 28.54 ? O3' FMN 2101 G 1 
HETATM 24 C C4' FMN . . . E 4 147.888 105.646 94.533 1 29.04 ? C4' FMN 2101 G 1 
HETATM 25 O O4' FMN . . . E 4 148.966 106.434 95.03 1 28.64 ? O4' FMN 2101 G 1 
HETATM 26 C C5' FMN . . . E 4 148.307 105.091 93.189 1 28.99 ? C5' FMN 2101 G 1 
HETATM 27 O O5' FMN . . . E 4 149.132 103.979 93.405 1 27.65 ? O5' FMN 2101 G 1 
HETATM 28 P P FMN . . . E 4 150.703 104.172 93.319 1 29.43 ? P FMN 2101 G 1 
HETATM 29 O O1P FMN . . . E 4 151.17 102.731 93.549 1 31.55 ? O1P FMN 2101 G 1 
HETATM 30 O O2P FMN . . . E 4 151.137 104.773 91.965 1 29.79 ? O2P FMN 2101 G 1 
HETATM 31 O O3P FMN . . . E 4 150.946 105.06 94.508 1 29.66 ? O3P FMN 2101 G 1 
#
_model_server_stats.io_time_ms              18 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    28 
_model_server_stats.query_time_ms           310 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           31 
#