data_8PSM
#
_model_server_result.job_id            g6ebFzKZCJ811bWyB2pdMw 
_model_server_result.datetime_utc      '2024-12-26 10:10:42' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8psm 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1901}' 
#
_entry.id    8PSM 
#
_exptl.entry_id    8PSM 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              358.348 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "4'-PHOSPHOPANTETHEINE" 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8PSM 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8PSM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 1246 A CYS 1246 1_555 A SG CYS 1327 A CYS 1327 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.873 ? 
covale ? covale1 B OG SER 180 B SER 180 1_555 D P24 PNS . B PNS 1901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.617 ? 
#
_chem_comp.formula           'C11 H23 N2 O7 P S' 
_chem_comp.formula_weight    358.348 
_chem_comp.id                PNS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "4'-PHOSPHOPANTETHEINE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O23 P24 PNS sing 312 n n 
O23 HOP1 PNS sing 313 n n 
P24 O25 PNS sing 314 n n 
P24 O26 PNS doub 315 n n 
P24 O27 PNS sing 316 n n 
O25 HOP2 PNS sing 317 n n 
O27 C28 PNS sing 318 n n 
C28 C29 PNS sing 319 n n 
C28 H282 PNS sing 320 n n 
C28 H281 PNS sing 321 n n 
C29 C30 PNS sing 322 n n 
C29 C31 PNS sing 323 n n 
C29 C32 PNS sing 324 n n 
C30 H303 PNS sing 325 n n 
C30 H302 PNS sing 326 n n 
C30 H301 PNS sing 327 n n 
C31 H313 PNS sing 328 n n 
C31 H312 PNS sing 329 n n 
C31 H311 PNS sing 330 n n 
C32 O33 PNS sing 331 n n 
C32 C34 PNS sing 332 n n 
C32 H32 PNS sing 333 n n 
O33 H33 PNS sing 334 n n 
C34 O35 PNS doub 335 n n 
C34 N36 PNS sing 336 n n 
N36 C37 PNS sing 337 n n 
N36 H36 PNS sing 338 n n 
C37 C38 PNS sing 339 n n 
C37 H372 PNS sing 340 n n 
C37 H371 PNS sing 341 n n 
C38 C39 PNS sing 342 n n 
C38 H382 PNS sing 343 n n 
C38 H381 PNS sing 344 n n 
C39 O40 PNS doub 345 n n 
C39 N41 PNS sing 346 n n 
N41 C42 PNS sing 347 n n 
N41 H41 PNS sing 348 n n 
C42 C43 PNS sing 349 n n 
C42 H422 PNS sing 350 n n 
C42 H421 PNS sing 351 n n 
C43 S44 PNS sing 352 n n 
C43 H431 PNS sing 353 n n 
C43 H432 PNS sing 354 n n 
S44 H44 PNS sing 355 n n 
#
_atom_sites.entry_id                     8PSM 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 3 PNS B 1 1901 180 PNS PSE . 
E 4 FMN G 1 2101 2101 FMN FMN . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O23 PNS . . . D 3 73.08 171.171 120.215 1 184.55 ? O23 PNS 1901 B 1 
HETATM 2 P P24 PNS . . . D 3 74.168 172.026 120.824 1 201.6 ? P24 PNS 1901 B 1 
HETATM 3 O O26 PNS . . . D 3 75.14 172.436 119.741 1 218.06 ? O26 PNS 1901 B 1 
HETATM 4 O O27 PNS . . . D 3 73.538 173.35 121.514 1 203.91 ? O27 PNS 1901 B 1 
HETATM 5 C C28 PNS . . . D 3 73.544 174.674 120.949 1 180.51 ? C28 PNS 1901 B 1 
HETATM 6 C C29 PNS . . . D 3 74.419 175.681 121.732 1 169.54 ? C29 PNS 1901 B 1 
HETATM 7 C C30 PNS . . . D 3 74.18 175.52 123.239 1 170.29 ? C30 PNS 1901 B 1 
HETATM 8 C C31 PNS . . . D 3 73.934 177.087 121.36 1 162.08 ? C31 PNS 1901 B 1 
HETATM 9 C C32 PNS . . . D 3 75.946 175.413 121.421 1 155.77 ? C32 PNS 1901 B 1 
HETATM 10 O O33 PNS . . . D 3 76.261 175.408 120.011 1 131.56 ? O33 PNS 1901 B 1 
HETATM 11 C C34 PNS . . . D 3 76.931 176.323 122.15 1 147.92 ? C34 PNS 1901 B 1 
HETATM 12 O O35 PNS . . . D 3 77.311 175.985 123.266 1 138.21 ? O35 PNS 1901 B 1 
HETATM 13 N N36 PNS . . . D 3 77.299 177.479 121.559 1 145.58 ? N36 PNS 1901 B 1 
HETATM 14 C C37 PNS . . . D 3 78.004 178.569 122.236 1 142.61 ? C37 PNS 1901 B 1 
HETATM 15 C C38 PNS . . . D 3 79.323 179.005 121.606 1 144.8 ? C38 PNS 1901 B 1 
HETATM 16 C C39 PNS . . . D 3 79.692 180.412 122.05 1 149.58 ? C39 PNS 1901 B 1 
HETATM 17 O O40 PNS . . . D 3 79.67 181.331 121.239 1 135.39 ? O40 PNS 1901 B 1 
HETATM 18 N N41 PNS . . . D 3 79.999 180.567 123.346 1 151.87 ? N41 PNS 1901 B 1 
HETATM 19 C C42 PNS . . . D 3 80.262 181.861 123.969 1 150.73 ? C42 PNS 1901 B 1 
HETATM 20 C C43 PNS . . . D 3 81.717 182.328 123.867 1 147.42 ? C43 PNS 1901 B 1 
HETATM 21 S S44 PNS . . . D 3 81.845 184.109 124.222 1 125.63 ? S44 PNS 1901 B 1 
#
_model_server_stats.io_time_ms              18 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    28 
_model_server_stats.query_time_ms           316 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           21 
#