data_8PST # _model_server_result.job_id TOX3FxALB15jLGZ0qXLCnQ _model_server_result.datetime_utc '2024-11-25 02:57:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8pst # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 8PST # _exptl.entry_id 8PST _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 270.321 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '~{O}3-~{tert}-butyl ~{O}1-methyl (1~{R},3~{S})-1-methyl-4-oxidanylidene-cyclohexane-1,3-dicarboxylate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8PST _cell.length_a 41.65 _cell.length_b 76.86 _cell.length_c 124.92 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8PST _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 165 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 161 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id C _struct_conn.ptnr2_label_atom_id C3 _struct_conn.ptnr2_label_comp_id DC6 _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id DC6 _struct_conn.ptnr2_auth_seq_id 402 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.76 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C14 H22 O5' _chem_comp.formula_weight 270.321 _chem_comp.id DC6 _chem_comp.mon_nstd_flag . _chem_comp.name '~{O}3-~{tert}-butyl ~{O}1-methyl (1~{R},3~{S})-1-methyl-4-oxidanylidene-cyclohexane-1,3-dicarboxylate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C20 C17 DC6 sing 128 n n C18 C17 DC6 sing 129 n n C17 C19 DC6 sing 130 n n C17 O3 DC6 sing 131 n n O3 C16 DC6 sing 132 n n C16 O2 DC6 doub 133 n n C16 C2 DC6 sing 134 n n C3 C2 DC6 sing 135 n n C3 C4 DC6 sing 136 n n C2 C1 DC6 sing 137 n n C15 O DC6 sing 138 n n O1 C14 DC6 doub 139 n n C14 O DC6 sing 140 n n C14 C4 DC6 sing 141 n n C4 C7 DC6 sing 142 n n C4 C5 DC6 sing 143 n n C1 O4 DC6 doub 144 n n C1 C6 DC6 sing 145 n n C5 C6 DC6 sing 146 n n C3 H1 DC6 sing 147 n n C3 H2 DC6 sing 148 n n C2 H3 DC6 sing 149 n n C18 H4 DC6 sing 150 n n C18 H5 DC6 sing 151 n n C18 H6 DC6 sing 152 n n C19 H7 DC6 sing 153 n n C19 H8 DC6 sing 154 n n C19 H9 DC6 sing 155 n n C20 H10 DC6 sing 156 n n C20 H11 DC6 sing 157 n n C20 H12 DC6 sing 158 n n C6 H13 DC6 sing 159 n n C6 H14 DC6 sing 160 n n C5 H15 DC6 sing 161 n n C5 H16 DC6 sing 162 n n C15 H17 DC6 sing 163 n n C15 H18 DC6 sing 164 n n C15 H19 DC6 sing 165 n n C7 H20 DC6 sing 166 n n C7 H21 DC6 sing 167 n n C7 H22 DC6 sing 168 n n # _atom_sites.entry_id 8PST _atom_sites.fract_transf_matrix[1][1] 0.02401 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013011 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008005 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 AN2 A 1 401 401 AN2 AN2 . C 3 DC6 A 1 402 501 DC6 R60 . D 4 HOH A 1 501 100 HOH HOH . D 4 HOH A 2 502 94 HOH HOH . D 4 HOH A 3 503 107 HOH HOH . D 4 HOH A 4 504 46 HOH HOH . D 4 HOH A 5 505 25 HOH HOH . D 4 HOH A 6 506 134 HOH HOH . D 4 HOH A 7 507 121 HOH HOH . D 4 HOH A 8 508 81 HOH HOH . D 4 HOH A 9 509 42 HOH HOH . D 4 HOH A 10 510 68 HOH HOH . D 4 HOH A 11 511 95 HOH HOH . D 4 HOH A 12 512 90 HOH HOH . D 4 HOH A 13 513 44 HOH HOH . D 4 HOH A 14 514 47 HOH HOH . D 4 HOH A 15 515 92 HOH HOH . D 4 HOH A 16 516 76 HOH HOH . D 4 HOH A 17 517 27 HOH HOH . D 4 HOH A 18 518 105 HOH HOH . D 4 HOH A 19 519 115 HOH HOH . D 4 HOH A 20 520 29 HOH HOH . D 4 HOH A 21 521 85 HOH HOH . D 4 HOH A 22 522 119 HOH HOH . D 4 HOH A 23 523 14 HOH HOH . D 4 HOH A 24 524 58 HOH HOH . D 4 HOH A 25 525 26 HOH HOH . D 4 HOH A 26 526 15 HOH HOH . D 4 HOH A 27 527 128 HOH HOH . D 4 HOH A 28 528 11 HOH HOH . D 4 HOH A 29 529 52 HOH HOH . D 4 HOH A 30 530 122 HOH HOH . D 4 HOH A 31 531 70 HOH HOH . D 4 HOH A 32 532 1 HOH HOH . D 4 HOH A 33 533 20 HOH HOH . D 4 HOH A 34 534 12 HOH HOH . D 4 HOH A 35 535 5 HOH HOH . D 4 HOH A 36 536 89 HOH HOH . D 4 HOH A 37 537 111 HOH HOH . D 4 HOH A 38 538 62 HOH HOH . D 4 HOH A 39 539 93 HOH HOH . D 4 HOH A 40 540 57 HOH HOH . D 4 HOH A 41 541 10 HOH HOH . D 4 HOH A 42 542 17 HOH HOH . D 4 HOH A 43 543 67 HOH HOH . D 4 HOH A 44 544 40 HOH HOH . D 4 HOH A 45 545 112 HOH HOH . D 4 HOH A 46 546 50 HOH HOH . D 4 HOH A 47 547 19 HOH HOH . D 4 HOH A 48 548 65 HOH HOH . D 4 HOH A 49 549 124 HOH HOH . D 4 HOH A 50 550 30 HOH HOH . D 4 HOH A 51 551 77 HOH HOH . D 4 HOH A 52 552 31 HOH HOH . D 4 HOH A 53 553 8 HOH HOH . D 4 HOH A 54 554 18 HOH HOH . D 4 HOH A 55 555 96 HOH HOH . D 4 HOH A 56 556 117 HOH HOH . D 4 HOH A 57 557 84 HOH HOH . D 4 HOH A 58 558 39 HOH HOH . D 4 HOH A 59 559 59 HOH HOH . D 4 HOH A 60 560 35 HOH HOH . D 4 HOH A 61 561 99 HOH HOH . D 4 HOH A 62 562 101 HOH HOH . D 4 HOH A 63 563 32 HOH HOH . D 4 HOH A 64 564 34 HOH HOH . D 4 HOH A 65 565 60 HOH HOH . D 4 HOH A 66 566 23 HOH HOH . D 4 HOH A 67 567 63 HOH HOH . D 4 HOH A 68 568 9 HOH HOH . D 4 HOH A 69 569 133 HOH HOH . D 4 HOH A 70 570 74 HOH HOH . D 4 HOH A 71 571 7 HOH HOH . D 4 HOH A 72 572 103 HOH HOH . D 4 HOH A 73 573 120 HOH HOH . D 4 HOH A 74 574 91 HOH HOH . D 4 HOH A 75 575 6 HOH HOH . D 4 HOH A 76 576 2 HOH HOH . D 4 HOH A 77 577 51 HOH HOH . D 4 HOH A 78 578 102 HOH HOH . D 4 HOH A 79 579 16 HOH HOH . D 4 HOH A 80 580 3 HOH HOH . D 4 HOH A 81 581 22 HOH HOH . D 4 HOH A 82 582 36 HOH HOH . D 4 HOH A 83 583 4 HOH HOH . D 4 HOH A 84 584 83 HOH HOH . D 4 HOH A 85 585 88 HOH HOH . D 4 HOH A 86 586 21 HOH HOH . D 4 HOH A 87 587 97 HOH HOH . D 4 HOH A 88 588 56 HOH HOH . D 4 HOH A 89 589 28 HOH HOH . D 4 HOH A 90 590 24 HOH HOH . D 4 HOH A 91 591 116 HOH HOH . D 4 HOH A 92 592 38 HOH HOH . D 4 HOH A 93 593 123 HOH HOH . D 4 HOH A 94 594 37 HOH HOH . D 4 HOH A 95 595 61 HOH HOH . D 4 HOH A 96 596 45 HOH HOH . D 4 HOH A 97 597 126 HOH HOH . D 4 HOH A 98 598 53 HOH HOH . D 4 HOH A 99 599 33 HOH HOH . D 4 HOH A 100 600 69 HOH HOH . D 4 HOH A 101 601 43 HOH HOH . D 4 HOH A 102 602 49 HOH HOH . D 4 HOH A 103 603 48 HOH HOH . D 4 HOH A 104 604 41 HOH HOH . D 4 HOH A 105 605 13 HOH HOH . D 4 HOH A 106 606 80 HOH HOH . D 4 HOH A 107 607 137 HOH HOH . D 4 HOH A 108 608 73 HOH HOH . D 4 HOH A 109 609 86 HOH HOH . D 4 HOH A 110 610 71 HOH HOH . D 4 HOH A 111 611 54 HOH HOH . D 4 HOH A 112 612 66 HOH HOH . D 4 HOH A 113 613 108 HOH HOH . D 4 HOH A 114 614 104 HOH HOH . D 4 HOH A 115 615 132 HOH HOH . D 4 HOH A 116 616 113 HOH HOH . D 4 HOH A 117 617 79 HOH HOH . D 4 HOH A 118 618 82 HOH HOH . D 4 HOH A 119 619 136 HOH HOH . D 4 HOH A 120 620 75 HOH HOH . D 4 HOH A 121 621 110 HOH HOH . D 4 HOH A 122 622 127 HOH HOH . D 4 HOH A 123 623 131 HOH HOH . D 4 HOH A 124 624 106 HOH HOH . D 4 HOH A 125 625 64 HOH HOH . D 4 HOH A 126 626 130 HOH HOH . D 4 HOH A 127 627 98 HOH HOH . D 4 HOH A 128 628 135 HOH HOH . D 4 HOH A 129 629 72 HOH HOH . D 4 HOH A 130 630 114 HOH HOH . D 4 HOH A 131 631 129 HOH HOH . D 4 HOH A 132 632 55 HOH HOH . D 4 HOH A 133 633 118 HOH HOH . D 4 HOH A 134 634 78 HOH HOH . D 4 HOH A 135 635 125 HOH HOH . D 4 HOH A 136 636 87 HOH HOH . D 4 HOH A 137 637 109 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C3 DC6 . . . C 3 -22.995 -31.457 20.52 1 43.67 ? C3 DC6 402 A 1 HETATM 2 C C2 DC6 . . . C 3 -24.419 -30.878 20.563 1 47.21 ? C2 DC6 402 A 1 HETATM 3 C C16 DC6 . . . C 3 -24.864 -30.075 19.393 1 52.5 ? C16 DC6 402 A 1 HETATM 4 C C17 DC6 . . . C 3 -24.95 -29.828 16.943 1 55.55 ? C17 DC6 402 A 1 HETATM 5 C C18 DC6 . . . C 3 -26.437 -30.118 16.871 1 57.11 ? C18 DC6 402 A 1 HETATM 6 C C19 DC6 . . . C 3 -24.709 -28.337 17.007 1 55.52 ? C19 DC6 402 A 1 HETATM 7 C C20 DC6 . . . C 3 -24.211 -30.436 15.775 1 54.61 ? C20 DC6 402 A 1 HETATM 8 C C1 DC6 . . . C 3 -24.881 -30.328 21.861 1 50.28 ? C1 DC6 402 A 1 HETATM 9 C C6 DC6 . . . C 3 -24.085 -30.547 23.079 1 54.35 ? C6 DC6 402 A 1 HETATM 10 C C5 DC6 . . . C 3 -23.675 -31.977 22.954 1 54.6 ? C5 DC6 402 A 1 HETATM 11 C C4 DC6 . . . C 3 -22.645 -32.098 21.851 1 56.9 ? C4 DC6 402 A 1 HETATM 12 C C14 DC6 . . . C 3 -22.546 -33.482 21.429 1 64.69 ? C14 DC6 402 A 1 HETATM 13 C C15 DC6 . . . C 3 -24.737 -34.168 20.709 1 71.84 ? C15 DC6 402 A 1 HETATM 14 C C7 DC6 . . . C 3 -21.308 -31.652 22.408 1 60.01 ? C7 DC6 402 A 1 HETATM 15 O O3 DC6 . . . C 3 -24.392 -30.408 18.09 1 55.67 ? O3 DC6 402 A 1 HETATM 16 O O2 DC6 . . . C 3 -25.65 -29.185 19.506 1 53.88 ? O2 DC6 402 A 1 HETATM 17 O O4 DC6 . . . C 3 -25.93 -29.77 21.968 1 53.3 ? O4 DC6 402 A 1 HETATM 18 O O DC6 . . . C 3 -23.683 -34.328 21.636 1 69.55 ? O DC6 402 A 1 HETATM 19 O O1 DC6 . . . C 3 -21.546 -33.802 20.861 1 67.03 ? O1 DC6 402 A 1 # _model_server_stats.io_time_ms 81 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 19 #