data_8PSW # _model_server_result.job_id 2Fru1cOnSEZpSa7iNRls-g _model_server_result.datetime_utc '2024-11-25 02:44:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8psw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 8PSW # _exptl.entry_id 8PSW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 346.417 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '~{O}3-~{tert}-butyl ~{O}1-methyl (1~{R},3~{R})-4-oxidanylidene-1-(phenylmethyl)cyclohexane-1,3-dicarboxylate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8PSW _cell.length_a 41.47 _cell.length_b 77.39 _cell.length_c 127.22 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8PSW _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 165 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 161 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id C _struct_conn.ptnr2_label_atom_id C3 _struct_conn.ptnr2_label_comp_id D2I _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id D2I _struct_conn.ptnr2_auth_seq_id 402 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.732 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C20 H26 O5' _chem_comp.formula_weight 346.417 _chem_comp.id D2I _chem_comp.mon_nstd_flag . _chem_comp.name '~{O}3-~{tert}-butyl ~{O}1-methyl (1~{R},3~{R})-4-oxidanylidene-1-(phenylmethyl)cyclohexane-1,3-dicarboxylate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C18 C17 D2I sing 128 n n C19 C17 D2I sing 129 n n C17 C20 D2I sing 130 n n C17 O3 D2I sing 131 n n O3 C16 D2I sing 132 n n C16 O2 D2I doub 133 n n C16 C2 D2I sing 134 n n C3 C2 D2I sing 135 n n C3 C4 D2I sing 136 n n O1 C14 D2I doub 137 n n C2 C1 D2I sing 138 n n C7 C4 D2I sing 139 n n C7 C8 D2I sing 140 n n C4 C14 D2I sing 141 n n C4 C5 D2I sing 142 n n C14 O D2I sing 143 n n C9 C8 D2I doub 144 n y C9 C10 D2I sing 145 n y C8 C13 D2I sing 146 n y C1 O4 D2I doub 147 n n C1 C6 D2I sing 148 n n O C15 D2I sing 149 n n C5 C6 D2I sing 150 n n C10 C11 D2I doub 151 n y C13 C12 D2I doub 152 n y C11 C12 D2I sing 153 n y C15 H1 D2I sing 154 n n C15 H2 D2I sing 155 n n C15 H3 D2I sing 156 n n C3 H4 D2I sing 157 n n C3 H5 D2I sing 158 n n C2 H6 D2I sing 159 n n C18 H7 D2I sing 160 n n C18 H8 D2I sing 161 n n C18 H9 D2I sing 162 n n C19 H10 D2I sing 163 n n C19 H11 D2I sing 164 n n C19 H12 D2I sing 165 n n C20 H13 D2I sing 166 n n C20 H14 D2I sing 167 n n C20 H15 D2I sing 168 n n C6 H16 D2I sing 169 n n C6 H17 D2I sing 170 n n C5 H18 D2I sing 171 n n C5 H19 D2I sing 172 n n C7 H20 D2I sing 173 n n C7 H21 D2I sing 174 n n C9 H22 D2I sing 175 n n C10 H23 D2I sing 176 n n C11 H24 D2I sing 177 n n C12 H25 D2I sing 178 n n C13 H26 D2I sing 179 n n # _atom_sites.entry_id 8PSW _atom_sites.fract_transf_matrix[1][1] 0.024114 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012922 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00786 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 AN2 A 1 401 401 AN2 AN2 . C 3 D2I A 1 402 501 D2I R67 . D 4 HOH A 1 501 56 HOH HOH . D 4 HOH A 2 502 15 HOH HOH . D 4 HOH A 3 503 14 HOH HOH . D 4 HOH A 4 504 104 HOH HOH . D 4 HOH A 5 505 68 HOH HOH . D 4 HOH A 6 506 83 HOH HOH . D 4 HOH A 7 507 57 HOH HOH . D 4 HOH A 8 508 28 HOH HOH . D 4 HOH A 9 509 60 HOH HOH . D 4 HOH A 10 510 21 HOH HOH . D 4 HOH A 11 511 35 HOH HOH . D 4 HOH A 12 512 33 HOH HOH . D 4 HOH A 13 513 69 HOH HOH . D 4 HOH A 14 514 79 HOH HOH . D 4 HOH A 15 515 22 HOH HOH . D 4 HOH A 16 516 54 HOH HOH . D 4 HOH A 17 517 7 HOH HOH . D 4 HOH A 18 518 41 HOH HOH . D 4 HOH A 19 519 45 HOH HOH . D 4 HOH A 20 520 63 HOH HOH . D 4 HOH A 21 521 43 HOH HOH . D 4 HOH A 22 522 19 HOH HOH . D 4 HOH A 23 523 9 HOH HOH . D 4 HOH A 24 524 17 HOH HOH . D 4 HOH A 25 525 47 HOH HOH . D 4 HOH A 26 526 29 HOH HOH . D 4 HOH A 27 527 50 HOH HOH . D 4 HOH A 28 528 26 HOH HOH . D 4 HOH A 29 529 40 HOH HOH . D 4 HOH A 30 530 59 HOH HOH . D 4 HOH A 31 531 87 HOH HOH . D 4 HOH A 32 532 25 HOH HOH . D 4 HOH A 33 533 90 HOH HOH . D 4 HOH A 34 534 86 HOH HOH . D 4 HOH A 35 535 4 HOH HOH . D 4 HOH A 36 536 96 HOH HOH . D 4 HOH A 37 537 98 HOH HOH . D 4 HOH A 38 538 51 HOH HOH . D 4 HOH A 39 539 53 HOH HOH . D 4 HOH A 40 540 49 HOH HOH . D 4 HOH A 41 541 3 HOH HOH . D 4 HOH A 42 542 81 HOH HOH . D 4 HOH A 43 543 20 HOH HOH . D 4 HOH A 44 544 24 HOH HOH . D 4 HOH A 45 545 67 HOH HOH . D 4 HOH A 46 546 65 HOH HOH . D 4 HOH A 47 547 48 HOH HOH . D 4 HOH A 48 548 38 HOH HOH . D 4 HOH A 49 549 10 HOH HOH . D 4 HOH A 50 550 103 HOH HOH . D 4 HOH A 51 551 13 HOH HOH . D 4 HOH A 52 552 37 HOH HOH . D 4 HOH A 53 553 95 HOH HOH . D 4 HOH A 54 554 70 HOH HOH . D 4 HOH A 55 555 16 HOH HOH . D 4 HOH A 56 556 77 HOH HOH . D 4 HOH A 57 557 91 HOH HOH . D 4 HOH A 58 558 74 HOH HOH . D 4 HOH A 59 559 85 HOH HOH . D 4 HOH A 60 560 66 HOH HOH . D 4 HOH A 61 561 46 HOH HOH . D 4 HOH A 62 562 58 HOH HOH . D 4 HOH A 63 563 44 HOH HOH . D 4 HOH A 64 564 55 HOH HOH . D 4 HOH A 65 565 100 HOH HOH . D 4 HOH A 66 566 23 HOH HOH . D 4 HOH A 67 567 6 HOH HOH . D 4 HOH A 68 568 73 HOH HOH . D 4 HOH A 69 569 2 HOH HOH . D 4 HOH A 70 570 27 HOH HOH . D 4 HOH A 71 571 18 HOH HOH . D 4 HOH A 72 572 1 HOH HOH . D 4 HOH A 73 573 64 HOH HOH . D 4 HOH A 74 574 93 HOH HOH . D 4 HOH A 75 575 88 HOH HOH . D 4 HOH A 76 576 5 HOH HOH . D 4 HOH A 77 577 31 HOH HOH . D 4 HOH A 78 578 30 HOH HOH . D 4 HOH A 79 579 78 HOH HOH . D 4 HOH A 80 580 42 HOH HOH . D 4 HOH A 81 581 34 HOH HOH . D 4 HOH A 82 582 12 HOH HOH . D 4 HOH A 83 583 52 HOH HOH . D 4 HOH A 84 584 72 HOH HOH . D 4 HOH A 85 585 97 HOH HOH . D 4 HOH A 86 586 62 HOH HOH . D 4 HOH A 87 587 8 HOH HOH . D 4 HOH A 88 588 36 HOH HOH . D 4 HOH A 89 589 84 HOH HOH . D 4 HOH A 90 590 71 HOH HOH . D 4 HOH A 91 591 80 HOH HOH . D 4 HOH A 92 592 11 HOH HOH . D 4 HOH A 93 593 32 HOH HOH . D 4 HOH A 94 594 92 HOH HOH . D 4 HOH A 95 595 82 HOH HOH . D 4 HOH A 96 596 102 HOH HOH . D 4 HOH A 97 597 61 HOH HOH . D 4 HOH A 98 598 89 HOH HOH . D 4 HOH A 99 599 94 HOH HOH . D 4 HOH A 100 600 101 HOH HOH . D 4 HOH A 101 601 105 HOH HOH . D 4 HOH A 102 602 76 HOH HOH . D 4 HOH A 103 603 39 HOH HOH . D 4 HOH A 104 604 75 HOH HOH . D 4 HOH A 105 605 99 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C15 D2I . . . C 3 -26.321 -32.763 23.603 1 55.32 ? C15 D2I 402 A 1 HETATM 2 O O D2I . . . C 3 -25.186 -31.893 23.596 1 53.25 ? O D2I 402 A 1 HETATM 3 C C14 D2I . . . C 3 -24.421 -31.664 22.38 1 54.06 ? C14 D2I 402 A 1 HETATM 4 C C3 D2I . . . C 3 -23.315 -29.745 21.275 1 37.19 ? C3 D2I 402 A 1 HETATM 5 C C2 D2I . . . C 3 -24.034 -28.464 21.712 1 46.87 ? C2 D2I 402 A 1 HETATM 6 C C16 D2I . . . C 3 -24.961 -28.044 20.599 1 45.48 ? C16 D2I 402 A 1 HETATM 7 C C17 D2I . . . C 3 -25.301 -27.926 18.085 1 53.04 ? C17 D2I 402 A 1 HETATM 8 C C18 D2I . . . C 3 -24.77 -28.683 16.877 1 52.34 ? C18 D2I 402 A 1 HETATM 9 C C19 D2I . . . C 3 -24.974 -26.444 17.976 1 53.96 ? C19 D2I 402 A 1 HETATM 10 C C20 D2I . . . C 3 -26.806 -28.124 18.206 1 52.12 ? C20 D2I 402 A 1 HETATM 11 C C1 D2I . . . C 3 -24.718 -28.541 23.055 1 48.55 ? C1 D2I 402 A 1 HETATM 12 C C6 D2I . . . C 3 -24.143 -29.379 24.17 1 48.18 ? C6 D2I 402 A 1 HETATM 13 C C5 D2I . . . C 3 -22.91 -30.131 23.677 1 50.35 ? C5 D2I 402 A 1 HETATM 14 C C4 D2I . . . C 3 -23.155 -30.827 22.341 1 51.45 ? C4 D2I 402 A 1 HETATM 15 C C7 D2I . . . C 3 -21.959 -31.732 21.981 1 62.57 ? C7 D2I 402 A 1 HETATM 16 C C8 D2I . . . C 3 -21.762 -32.867 22.976 1 74.91 ? C8 D2I 402 A 1 HETATM 17 C C9 D2I . . . C 3 -22.525 -34.029 22.88 1 76.71 ? C9 D2I 402 A 1 HETATM 18 C C10 D2I . . . C 3 -22.354 -35.063 23.796 1 80.37 ? C10 D2I 402 A 1 HETATM 19 C C11 D2I . . . C 3 -21.412 -34.945 24.81 1 82.74 ? C11 D2I 402 A 1 HETATM 20 C C12 D2I . . . C 3 -20.644 -33.79 24.909 1 85.62 ? C12 D2I 402 A 1 HETATM 21 C C13 D2I . . . C 3 -20.815 -32.755 23.992 1 86.99 ? C13 D2I 402 A 1 HETATM 22 O O1 D2I . . . C 3 -24.825 -32.194 21.368 1 55.44 ? O1 D2I 402 A 1 HETATM 23 O O2 D2I . . . C 3 -25.932 -27.345 20.84 1 41.3 ? O2 D2I 402 A 1 HETATM 24 O O3 D2I . . . C 3 -24.655 -28.46 19.237 1 46.41 ? O3 D2I 402 A 1 HETATM 25 O O4 D2I . . . C 3 -25.73 -27.881 23.253 1 46.88 ? O4 D2I 402 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 25 #