data_8PUX # _model_server_result.job_id cShWkrDdSrzsRUscGOST2A _model_server_result.datetime_utc '2025-07-05 07:16:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8pux # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 8PUX # _exptl.entry_id 8PUX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 228.371 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MYRISTIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 117.55 _cell.angle_gamma 90 _cell.entry_id 8PUX _cell.length_a 122.306 _cell.length_b 61.613 _cell.length_c 79.704 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8PUX _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 165 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 380 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id D _struct_conn.ptnr2_label_atom_id C23 _struct_conn.ptnr2_label_comp_id B3F _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id B3F _struct_conn.ptnr2_auth_seq_id 501 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.615 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C14 H28 O2' _chem_comp.formula_weight 228.371 _chem_comp.id MYR _chem_comp.mon_nstd_flag . _chem_comp.name 'MYRISTIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 MYR doub 288 n n C1 O2 MYR sing 289 n n C1 C2 MYR sing 290 n n O2 HO2 MYR sing 291 n n C2 C3 MYR sing 292 n n C2 H21 MYR sing 293 n n C2 H22 MYR sing 294 n n C3 C4 MYR sing 295 n n C3 H31 MYR sing 296 n n C3 H32 MYR sing 297 n n C4 C5 MYR sing 298 n n C4 H41 MYR sing 299 n n C4 H42 MYR sing 300 n n C5 C6 MYR sing 301 n n C5 H51 MYR sing 302 n n C5 H52 MYR sing 303 n n C6 C7 MYR sing 304 n n C6 H61 MYR sing 305 n n C6 H62 MYR sing 306 n n C7 C8 MYR sing 307 n n C7 H71 MYR sing 308 n n C7 H72 MYR sing 309 n n C8 C9 MYR sing 310 n n C8 H81 MYR sing 311 n n C8 H82 MYR sing 312 n n C9 C10 MYR sing 313 n n C9 H91 MYR sing 314 n n C9 H92 MYR sing 315 n n C10 C11 MYR sing 316 n n C10 H101 MYR sing 317 n n C10 H102 MYR sing 318 n n C11 C12 MYR sing 319 n n C11 H111 MYR sing 320 n n C11 H112 MYR sing 321 n n C12 C13 MYR sing 322 n n C12 H121 MYR sing 323 n n C12 H122 MYR sing 324 n n C13 C14 MYR sing 325 n n C13 H131 MYR sing 326 n n C13 H132 MYR sing 327 n n C14 H141 MYR sing 328 n n C14 H142 MYR sing 329 n n C14 H143 MYR sing 330 n n # _atom_sites.entry_id 8PUX _atom_sites.fract_transf_matrix[1][1] 0.008176 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004265 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01623 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014151 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MYR B 1 501 1 MYR MYR . D 3 B3F A 1 501 1 B3F 864 . E 4 HOH B 1 601 1 HOH HOH . E 4 HOH B 2 602 5 HOH HOH . E 4 HOH B 3 603 31 HOH HOH . E 4 HOH B 4 604 4 HOH HOH . E 4 HOH B 5 605 23 HOH HOH . E 4 HOH B 6 606 13 HOH HOH . E 4 HOH B 7 607 39 HOH HOH . E 4 HOH B 8 608 20 HOH HOH . E 4 HOH B 9 609 37 HOH HOH . E 4 HOH B 10 610 19 HOH HOH . E 4 HOH B 11 611 22 HOH HOH . E 4 HOH B 12 612 10 HOH HOH . E 4 HOH B 13 613 7 HOH HOH . E 4 HOH B 14 614 6 HOH HOH . E 4 HOH B 15 615 43 HOH HOH . E 4 HOH B 16 616 2 HOH HOH . E 4 HOH B 17 617 11 HOH HOH . E 4 HOH B 18 618 28 HOH HOH . E 4 HOH B 19 619 24 HOH HOH . E 4 HOH B 20 620 30 HOH HOH . E 4 HOH B 21 621 21 HOH HOH . E 4 HOH B 22 622 26 HOH HOH . E 4 HOH B 23 623 3 HOH HOH . E 4 HOH B 24 624 29 HOH HOH . E 4 HOH B 25 625 25 HOH HOH . E 4 HOH B 26 626 40 HOH HOH . E 4 HOH B 27 627 27 HOH HOH . F 4 HOH A 1 601 14 HOH HOH . F 4 HOH A 2 602 42 HOH HOH . F 4 HOH A 3 603 32 HOH HOH . F 4 HOH A 4 604 18 HOH HOH . F 4 HOH A 5 605 17 HOH HOH . F 4 HOH A 6 606 34 HOH HOH . F 4 HOH A 7 607 12 HOH HOH . F 4 HOH A 8 608 38 HOH HOH . F 4 HOH A 9 609 16 HOH HOH . F 4 HOH A 10 610 36 HOH HOH . F 4 HOH A 11 611 15 HOH HOH . F 4 HOH A 12 612 33 HOH HOH . F 4 HOH A 13 613 35 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 MYR . . . C 2 -37.772 -4.815 17.592 1 88.7 ? C1 MYR 501 B 1 HETATM 2 O O1 MYR . . . C 2 -37.463 -4.801 16.387 1 93.66 ? O1 MYR 501 B 1 HETATM 3 O O2 MYR . . . C 2 -38.957 -4.729 18.006 1 91.91 ? O2 MYR 501 B 1 HETATM 4 C C2 MYR . . . C 2 -36.648 -4.925 18.61 1 77.29 ? C2 MYR 501 B 1 HETATM 5 C C3 MYR . . . C 2 -35.73 -6.086 18.402 1 71.51 ? C3 MYR 501 B 1 HETATM 6 C C4 MYR . . . C 2 -36.333 -7.406 18.811 1 68.02 ? C4 MYR 501 B 1 HETATM 7 C C5 MYR . . . C 2 -36.288 -8.492 17.738 1 67.73 ? C5 MYR 501 B 1 HETATM 8 C C6 MYR . . . C 2 -35.067 -9.379 17.823 1 67.73 ? C6 MYR 501 B 1 HETATM 9 C C7 MYR . . . C 2 -35.142 -10.689 17.066 1 61.23 ? C7 MYR 501 B 1 HETATM 10 C C8 MYR . . . C 2 -36.406 -10.94 16.303 1 52.67 ? C8 MYR 501 B 1 HETATM 11 C C9 MYR . . . C 2 -36.335 -12.198 15.49 1 55.12 ? C9 MYR 501 B 1 HETATM 12 C C10 MYR . . . C 2 -37.283 -12.269 14.316 1 60 ? C10 MYR 501 B 1 HETATM 13 C C11 MYR . . . C 2 -36.605 -12.249 12.944 1 60.48 ? C11 MYR 501 B 1 HETATM 14 C C12 MYR . . . C 2 -36.932 -13.421 12.046 1 63.76 ? C12 MYR 501 B 1 # _model_server_stats.io_time_ms 68 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 346 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 14 #