data_8PVR
#
_model_server_result.job_id            rXQG9bR1CSVji7zkOmx6_g 
_model_server_result.datetime_utc      '2024-10-10 11:20:44' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8pvr 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":601}' 
#
_entry.id    8PVR 
#
_exptl.entry_id    8PVR 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              746.566 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2R)-3-{[(S)-hydroxy{[(1S,2R,3R,4S,5S,6R)-2,4,6-trihydroxy-3,5-bis(phosphonooxy)cyclohexyl]oxy}phosphoryl]oxy}propane-1,2-diyl dioctanoate' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8PVR 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8PVR 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C25 H49 O19 P3' 
_chem_comp.formula_weight    746.566 
_chem_comp.id                EUJ 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2R)-3-{[(S)-hydroxy{[(1S,2R,3R,4S,5S,6R)-2,4,6-trihydroxy-3,5-bis(phosphonooxy)cyclohexyl]oxy}phosphoryl]oxy}propane-1,2-diyl dioctanoate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C8A C7A EUJ sing 83 n n 
C7A C6A EUJ sing 84 n n 
C8B C7B EUJ sing 85 n n 
C6A C5A EUJ sing 86 n n 
C7B C6B EUJ sing 87 n n 
C5A C4A EUJ sing 88 n n 
C6B C5B EUJ sing 89 n n 
C4A C3A EUJ sing 90 n n 
C5B C4B EUJ sing 91 n n 
C3A C2A EUJ sing 92 n n 
C4B C3B EUJ sing 93 n n 
C2A C1A EUJ sing 94 n n 
C3B C2B EUJ sing 95 n n 
O1A C1A EUJ doub 96 n n 
C1A O2C EUJ sing 97 n n 
C2B C1B EUJ sing 98 n n 
O2C C2C EUJ sing 99 n n 
C1B O3C EUJ sing 100 n n 
C1B O1B EUJ doub 101 n n 
O3C C3C EUJ sing 102 n n 
C1C C2C EUJ sing 103 n n 
C1C O13 EUJ sing 104 n n 
C2C C3C EUJ sing 105 n n 
O11 P1 EUJ doub 106 n n 
O12 P1 EUJ sing 107 n n 
O13 P1 EUJ sing 108 n n 
P1 O1 EUJ sing 109 n n 
O32 P3 EUJ doub 110 n n 
O31 P3 EUJ sing 111 n n 
O1 C1 EUJ sing 112 n n 
P3 O33 EUJ sing 113 n n 
P3 O3 EUJ sing 114 n n 
C2 C1 EUJ sing 115 n n 
C2 O2 EUJ sing 116 n n 
C2 C3 EUJ sing 117 n n 
C1 C6 EUJ sing 118 n n 
O3 C3 EUJ sing 119 n n 
C3 C4 EUJ sing 120 n n 
C6 O6 EUJ sing 121 n n 
C6 C5 EUJ sing 122 n n 
C4 C5 EUJ sing 123 n n 
C4 O4 EUJ sing 124 n n 
C5 O5 EUJ sing 125 n n 
O5 P5 EUJ sing 126 n n 
O53 P5 EUJ doub 127 n n 
O51 P5 EUJ sing 128 n n 
P5 O52 EUJ sing 129 n n 
C1 H1 EUJ sing 130 n n 
C2 H2 EUJ sing 131 n n 
C3 H3 EUJ sing 132 n n 
C4 H4 EUJ sing 133 n n 
C5 H5 EUJ sing 134 n n 
C6 H6 EUJ sing 135 n n 
O2 H7 EUJ sing 136 n n 
O4 H8 EUJ sing 137 n n 
O6 H9 EUJ sing 138 n n 
O12 H10 EUJ sing 139 n n 
O31 H11 EUJ sing 140 n n 
O33 H12 EUJ sing 141 n n 
O51 H13 EUJ sing 142 n n 
O52 H14 EUJ sing 143 n n 
C1C H15 EUJ sing 144 n n 
C1C H16 EUJ sing 145 n n 
C2A H17 EUJ sing 146 n n 
C2A H18 EUJ sing 147 n n 
C2B H19 EUJ sing 148 n n 
C2B H20 EUJ sing 149 n n 
C2C H21 EUJ sing 150 n n 
C3A H22 EUJ sing 151 n n 
C3A H23 EUJ sing 152 n n 
C3B H24 EUJ sing 153 n n 
C3B H25 EUJ sing 154 n n 
C3C H26 EUJ sing 155 n n 
C3C H27 EUJ sing 156 n n 
C4A H28 EUJ sing 157 n n 
C4A H29 EUJ sing 158 n n 
C4B H30 EUJ sing 159 n n 
C4B H31 EUJ sing 160 n n 
C5A H32 EUJ sing 161 n n 
C5A H33 EUJ sing 162 n n 
C5B H34 EUJ sing 163 n n 
C5B H35 EUJ sing 164 n n 
C6A H36 EUJ sing 165 n n 
C6A H37 EUJ sing 166 n n 
C6B H38 EUJ sing 167 n n 
C6B H39 EUJ sing 168 n n 
C7A H40 EUJ sing 169 n n 
C7A H41 EUJ sing 170 n n 
C7B H42 EUJ sing 171 n n 
C7B H43 EUJ sing 172 n n 
C8A H44 EUJ sing 173 n n 
C8A H45 EUJ sing 174 n n 
C8A H46 EUJ sing 175 n n 
C8B H47 EUJ sing 176 n n 
C8B H48 EUJ sing 177 n n 
C8B H49 EUJ sing 178 n n 
#
_atom_sites.entry_id                     8PVR 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 EUJ B 1 601 601 EUJ EUJ . 
D 2 EUJ A 1 601 601 EUJ EUJ . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EUJ . . . D 2 150.31 150.074 154.514 1 197.7 ? C1 EUJ 601 A 1 
HETATM 2 C C2 EUJ . . . D 2 151.547 150.596 155.241 1 196.58 ? C2 EUJ 601 A 1 
HETATM 3 C C3 EUJ . . . D 2 151.136 151.306 156.529 1 195.98 ? C3 EUJ 601 A 1 
HETATM 4 C C4 EUJ . . . D 2 150.363 150.344 157.43 1 195.08 ? C4 EUJ 601 A 1 
HETATM 5 C C5 EUJ . . . D 2 149.13 149.808 156.704 1 196.61 ? C5 EUJ 601 A 1 
HETATM 6 C C6 EUJ . . . D 2 149.551 149.104 155.415 1 197.01 ? C6 EUJ 601 A 1 
HETATM 7 O O1 EUJ . . . D 2 150.71 149.402 153.354 1 198.9 ? O1 EUJ 601 A 1 
HETATM 8 O O2 EUJ . . . D 2 152.388 149.522 155.555 1 197.55 ? O2 EUJ 601 A 1 
HETATM 9 O O3 EUJ . . . D 2 152.288 151.732 157.197 1 197.57 ? O3 EUJ 601 A 1 
HETATM 10 O O4 EUJ . . . D 2 149.958 151.021 158.587 1 193.4 ? O4 EUJ 601 A 1 
HETATM 11 O O5 EUJ . . . D 2 148.474 148.892 157.532 1 198.89 ? O5 EUJ 601 A 1 
HETATM 12 O O6 EUJ . . . D 2 148.411 148.646 154.742 1 196.93 ? O6 EUJ 601 A 1 
HETATM 13 P P1 EUJ . . . D 2 149.87 149.677 151.965 1 205.02 ? P1 EUJ 601 A 1 
HETATM 14 O O11 EUJ . . . D 2 148.394 149.507 152.23 1 200.15 ? O11 EUJ 601 A 1 
HETATM 15 O O12 EUJ . . . D 2 150.14 151.083 151.486 1 196.37 ? O12 EUJ 601 A 1 
HETATM 16 O O13 EUJ . . . D 2 150.346 148.602 150.81 1 196.71 ? O13 EUJ 601 A 1 
HETATM 17 P P3 EUJ . . . D 2 152.813 153.277 156.966 1 203.85 ? P3 EUJ 601 A 1 
HETATM 18 O O31 EUJ . . . D 2 154.312 153.328 157.138 1 197.6 ? O31 EUJ 601 A 1 
HETATM 19 O O32 EUJ . . . D 2 152.45 153.736 155.574 1 196.75 ? O32 EUJ 601 A 1 
HETATM 20 O O33 EUJ . . . D 2 152.162 154.185 157.982 1 196.54 ? O33 EUJ 601 A 1 
HETATM 21 P P5 EUJ . . . D 2 146.826 148.863 157.536 1 201.44 ? P5 EUJ 601 A 1 
HETATM 22 O O51 EUJ . . . D 2 146.302 150.126 158.176 1 195.12 ? O51 EUJ 601 A 1 
HETATM 23 O O52 EUJ . . . D 2 146.347 147.665 158.321 1 194.97 ? O52 EUJ 601 A 1 
HETATM 24 O O53 EUJ . . . D 2 146.319 148.769 156.117 1 195.15 ? O53 EUJ 601 A 1 
HETATM 25 C C1A EUJ . . . D 2 150.403 146.467 147.031 1 196.57 ? C1A EUJ 601 A 1 
HETATM 26 C C1B EUJ . . . D 2 149.402 150.822 146.518 1 191.29 ? C1B EUJ 601 A 1 
HETATM 27 C C1C EUJ . . . D 2 149.369 147.808 150.202 1 194.68 ? C1C EUJ 601 A 1 
HETATM 28 C C2A EUJ . . . D 2 151.54 145.675 146.39 1 195.31 ? C2A EUJ 601 A 1 
HETATM 29 C C2B EUJ . . . D 2 150.806 150.877 145.921 1 189.89 ? C2B EUJ 601 A 1 
HETATM 30 C C2C EUJ . . . D 2 149.526 147.883 148.686 1 195.85 ? C2C EUJ 601 A 1 
HETATM 31 C C3A EUJ . . . D 2 152.208 144.783 147.435 1 194.23 ? C3A EUJ 601 A 1 
HETATM 32 C C3B EUJ . . . D 2 150.858 151.957 144.844 1 188.01 ? C3B EUJ 601 A 1 
HETATM 33 C C3C EUJ . . . D 2 149.819 149.325 148.275 1 196.96 ? C3C EUJ 601 A 1 
HETATM 34 C C4A EUJ . . . D 2 151.184 143.806 148.007 1 192.75 ? C4A EUJ 601 A 1 
HETATM 35 C C4B EUJ . . . D 2 151.408 153.252 145.438 1 189.94 ? C4B EUJ 601 A 1 
HETATM 36 C C5A EUJ . . . D 2 151.902 142.569 148.543 1 192.92 ? C5A EUJ 601 A 1 
HETATM 37 C C5B EUJ . . . D 2 151.216 154.386 144.434 1 192.48 ? C5B EUJ 601 A 1 
HETATM 38 C C6A EUJ . . . D 2 152.888 142.975 149.636 1 193.71 ? C6A EUJ 601 A 1 
HETATM 39 C C6B EUJ . . . D 2 151.951 154.054 143.138 1 190.71 ? C6B EUJ 601 A 1 
HETATM 40 C C7A EUJ . . . D 2 152.123 143.368 150.897 1 191.91 ? C7A EUJ 601 A 1 
HETATM 41 C C7B EUJ . . . D 2 153.457 154.135 143.373 1 191.1 ? C7B EUJ 601 A 1 
HETATM 42 C C8A EUJ . . . D 2 153.113 143.62 152.032 1 191.57 ? C8A EUJ 601 A 1 
HETATM 43 C C8B EUJ . . . D 2 153.835 155.566 143.746 1 191.5 ? C8B EUJ 601 A 1 
HETATM 44 O O1A EUJ . . . D 2 149.367 146.577 146.465 1 195.75 ? O1A EUJ 601 A 1 
HETATM 45 O O1B EUJ . . . D 2 148.666 151.741 146.387 1 189.52 ? O1B EUJ 601 A 1 
HETATM 46 O O2C EUJ . . . D 2 150.585 147.063 148.284 1 198.75 ? O2C EUJ 601 A 1 
HETATM 47 O O3C EUJ . . . D 2 148.983 149.683 147.212 1 196.33 ? O3C EUJ 601 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           262 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           47 
#