data_8PWE # _model_server_result.job_id 2EvN0dMrvMQf9GfE4UquaQ _model_server_result.datetime_utc '2024-10-12 16:38:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8pwe # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":502}' # _entry.id 8PWE # _exptl.entry_id 8PWE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 394.546 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (1~{R},3~{S},5~{Z})-4-methylidene-5-[(~{E})-3-[3-(6-methyl-6-oxidanyl-hept-3-ynyl)phenyl]pent-2-enylidene]cyclohexane-1,3-diol _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8PWE _cell.length_a 65.8 _cell.length_b 65.8 _cell.length_c 263.387 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8PWE _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall 'P 65 2 (x,y,z+1/12)' _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 12_564 x,x-y+1,-z-1/6 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 -32.9 56.984472 -43.897833 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C26 H34 O3' _chem_comp.formula_weight 394.546 _chem_comp.id FUW _chem_comp.mon_nstd_flag . _chem_comp.name (1~{R},3~{S},5~{Z})-4-methylidene-5-[(~{E})-3-[3-(6-methyl-6-oxidanyl-hept-3-ynyl)phenyl]pent-2-enylidene]cyclohexane-1,3-diol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 FUW sing 89 n n C1 C2 FUW sing 90 n n C3 C2 FUW doub 91 e n C4 C3 FUW sing 92 n n C5 C4 FUW doub 93 z n C5 C6 FUW sing 94 n n C6 C7 FUW sing 95 n n O C7 FUW sing 96 n n C7 C8 FUW sing 97 n n C8 C9 FUW sing 98 n n O1 C9 FUW sing 99 n n C9 C10 FUW sing 100 n n C10 C5 FUW sing 101 n n C11 C10 FUW doub 102 n n C2 C12 FUW sing 103 n n C12 C13 FUW doub 104 n y C13 C14 FUW sing 105 n y C15 C14 FUW doub 106 n y C16 C15 FUW sing 107 n y C17 C16 FUW doub 108 n y C12 C17 FUW sing 109 n y C14 C18 FUW sing 110 n n C18 C19 FUW sing 111 n n C19 C20 FUW sing 112 n n C20 C21 FUW trip 113 n n C21 C22 FUW sing 114 n n C22 C23 FUW sing 115 n n C24 C23 FUW sing 116 n n C25 C23 FUW sing 117 n n C23 O2 FUW sing 118 n n C7 H FUW sing 119 n n C8 H13 FUW sing 120 n n C8 H12 FUW sing 121 n n C9 H1 FUW sing 122 n n O1 H14 FUW sing 123 n n C1 H5 FUW sing 124 n n C1 H6 FUW sing 125 n n C6 H9 FUW sing 126 n n C6 H10 FUW sing 127 n n C4 H8 FUW sing 128 n n C3 H7 FUW sing 129 n n C H2 FUW sing 130 n n C H4 FUW sing 131 n n C H3 FUW sing 132 n n O H11 FUW sing 133 n n C11 H16 FUW sing 134 n n C11 H15 FUW sing 135 n n C13 H17 FUW sing 136 n n C15 H18 FUW sing 137 n n C16 H19 FUW sing 138 n n C17 H20 FUW sing 139 n n C18 H21 FUW sing 140 n n C18 H22 FUW sing 141 n n C19 H23 FUW sing 142 n n C19 H24 FUW sing 143 n n C22 H26 FUW sing 144 n n C22 H25 FUW sing 145 n n C24 H29 FUW sing 146 n n C24 H27 FUW sing 147 n n C24 H28 FUW sing 148 n n C25 H32 FUW sing 149 n n C25 H30 FUW sing 150 n n C25 H31 FUW sing 151 n n O2 H33 FUW sing 152 n n # _atom_sites.entry_id 8PWE _atom_sites.fract_transf_matrix[1][1] 0.015198 _atom_sites.fract_transf_matrix[1][2] 0.008774 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017549 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003797 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ACT A 1 501 502 ACT ACT . D 4 FUW A 1 502 1 FUW XXX . E 5 HOH A 1 601 197 HOH HOH . E 5 HOH A 2 602 179 HOH HOH . E 5 HOH A 3 603 163 HOH HOH . E 5 HOH A 4 604 48 HOH HOH . E 5 HOH A 5 605 16 HOH HOH . E 5 HOH A 6 606 100 HOH HOH . E 5 HOH A 7 607 47 HOH HOH . E 5 HOH A 8 608 131 HOH HOH . E 5 HOH A 9 609 173 HOH HOH . E 5 HOH A 10 610 96 HOH HOH . E 5 HOH A 11 611 64 HOH HOH . E 5 HOH A 12 612 53 HOH HOH . E 5 HOH A 13 613 86 HOH HOH . E 5 HOH A 14 614 150 HOH HOH . E 5 HOH A 15 615 122 HOH HOH . E 5 HOH A 16 616 176 HOH HOH . E 5 HOH A 17 617 128 HOH HOH . E 5 HOH A 18 618 45 HOH HOH . E 5 HOH A 19 619 116 HOH HOH . E 5 HOH A 20 620 196 HOH HOH . E 5 HOH A 21 621 97 HOH HOH . E 5 HOH A 22 622 59 HOH HOH . E 5 HOH A 23 623 190 HOH HOH . E 5 HOH A 24 624 87 HOH HOH . E 5 HOH A 25 625 5 HOH HOH . E 5 HOH A 26 626 93 HOH HOH . E 5 HOH A 27 627 7 HOH HOH . E 5 HOH A 28 628 19 HOH HOH . E 5 HOH A 29 629 169 HOH HOH . E 5 HOH A 30 630 41 HOH HOH . E 5 HOH A 31 631 66 HOH HOH . E 5 HOH A 32 632 4 HOH HOH . E 5 HOH A 33 633 123 HOH HOH . E 5 HOH A 34 634 33 HOH HOH . E 5 HOH A 35 635 52 HOH HOH . E 5 HOH A 36 636 186 HOH HOH . E 5 HOH A 37 637 36 HOH HOH . E 5 HOH A 38 638 70 HOH HOH . E 5 HOH A 39 639 98 HOH HOH . E 5 HOH A 40 640 2 HOH HOH . E 5 HOH A 41 641 18 HOH HOH . E 5 HOH A 42 642 3 HOH HOH . E 5 HOH A 43 643 13 HOH HOH . E 5 HOH A 44 644 88 HOH HOH . E 5 HOH A 45 645 184 HOH HOH . E 5 HOH A 46 646 1 HOH HOH . E 5 HOH A 47 647 193 HOH HOH . E 5 HOH A 48 648 21 HOH HOH . E 5 HOH A 49 649 102 HOH HOH . E 5 HOH A 50 650 134 HOH HOH . E 5 HOH A 51 651 194 HOH HOH . E 5 HOH A 52 652 6 HOH HOH . E 5 HOH A 53 653 8 HOH HOH . E 5 HOH A 54 654 14 HOH HOH . E 5 HOH A 55 655 77 HOH HOH . E 5 HOH A 56 656 149 HOH HOH . E 5 HOH A 57 657 25 HOH HOH . E 5 HOH A 58 658 137 HOH HOH . E 5 HOH A 59 659 90 HOH HOH . E 5 HOH A 60 660 74 HOH HOH . E 5 HOH A 61 661 42 HOH HOH . E 5 HOH A 62 662 23 HOH HOH . E 5 HOH A 63 663 20 HOH HOH . E 5 HOH A 64 664 185 HOH HOH . E 5 HOH A 65 665 30 HOH HOH . E 5 HOH A 66 666 191 HOH HOH . E 5 HOH A 67 667 61 HOH HOH . E 5 HOH A 68 668 29 HOH HOH . E 5 HOH A 69 669 28 HOH HOH . E 5 HOH A 70 670 17 HOH HOH . E 5 HOH A 71 671 35 HOH HOH . E 5 HOH A 72 672 38 HOH HOH . E 5 HOH A 73 673 22 HOH HOH . E 5 HOH A 74 674 43 HOH HOH . E 5 HOH A 75 675 130 HOH HOH . E 5 HOH A 76 676 142 HOH HOH . E 5 HOH A 77 677 153 HOH HOH . E 5 HOH A 78 678 54 HOH HOH . E 5 HOH A 79 679 10 HOH HOH . E 5 HOH A 80 680 55 HOH HOH . E 5 HOH A 81 681 83 HOH HOH . E 5 HOH A 82 682 108 HOH HOH . E 5 HOH A 83 683 34 HOH HOH . E 5 HOH A 84 684 9 HOH HOH . E 5 HOH A 85 685 139 HOH HOH . E 5 HOH A 86 686 46 HOH HOH . E 5 HOH A 87 687 141 HOH HOH . E 5 HOH A 88 688 58 HOH HOH . E 5 HOH A 89 689 57 HOH HOH . E 5 HOH A 90 690 11 HOH HOH . E 5 HOH A 91 691 62 HOH HOH . E 5 HOH A 92 692 113 HOH HOH . E 5 HOH A 93 693 166 HOH HOH . E 5 HOH A 94 694 110 HOH HOH . E 5 HOH A 95 695 60 HOH HOH . E 5 HOH A 96 696 63 HOH HOH . E 5 HOH A 97 697 84 HOH HOH . E 5 HOH A 98 698 129 HOH HOH . E 5 HOH A 99 699 26 HOH HOH . E 5 HOH A 100 700 144 HOH HOH . E 5 HOH A 101 701 160 HOH HOH . E 5 HOH A 102 702 40 HOH HOH . E 5 HOH A 103 703 117 HOH HOH . E 5 HOH A 104 704 165 HOH HOH . E 5 HOH A 105 705 44 HOH HOH . E 5 HOH A 106 706 188 HOH HOH . E 5 HOH A 107 707 85 HOH HOH . E 5 HOH A 108 708 24 HOH HOH . E 5 HOH A 109 709 51 HOH HOH . E 5 HOH A 110 710 15 HOH HOH . E 5 HOH A 111 711 69 HOH HOH . E 5 HOH A 112 712 65 HOH HOH . E 5 HOH A 113 713 200 HOH HOH . E 5 HOH A 114 714 148 HOH HOH . E 5 HOH A 115 715 106 HOH HOH . E 5 HOH A 116 716 124 HOH HOH . E 5 HOH A 117 717 12 HOH HOH . E 5 HOH A 118 718 174 HOH HOH . E 5 HOH A 119 719 136 HOH HOH . E 5 HOH A 120 720 138 HOH HOH . E 5 HOH A 121 721 162 HOH HOH . E 5 HOH A 122 722 187 HOH HOH . E 5 HOH A 123 723 145 HOH HOH . E 5 HOH A 124 724 101 HOH HOH . E 5 HOH A 125 725 198 HOH HOH . E 5 HOH A 126 726 115 HOH HOH . E 5 HOH A 127 727 39 HOH HOH . E 5 HOH A 128 728 202 HOH HOH . E 5 HOH A 129 729 103 HOH HOH . E 5 HOH A 130 730 171 HOH HOH . E 5 HOH A 131 731 107 HOH HOH . E 5 HOH A 132 732 178 HOH HOH . E 5 HOH A 133 733 27 HOH HOH . E 5 HOH A 134 734 31 HOH HOH . E 5 HOH A 135 735 114 HOH HOH . E 5 HOH A 136 736 119 HOH HOH . E 5 HOH A 137 737 126 HOH HOH . E 5 HOH A 138 738 152 HOH HOH . E 5 HOH A 139 739 76 HOH HOH . E 5 HOH A 140 740 147 HOH HOH . E 5 HOH A 141 741 89 HOH HOH . E 5 HOH A 142 742 199 HOH HOH . E 5 HOH A 143 743 99 HOH HOH . E 5 HOH A 144 744 92 HOH HOH . E 5 HOH A 145 745 132 HOH HOH . E 5 HOH A 146 746 127 HOH HOH . E 5 HOH A 147 747 73 HOH HOH . E 5 HOH A 148 748 109 HOH HOH . E 5 HOH A 149 749 111 HOH HOH . E 5 HOH A 150 750 105 HOH HOH . E 5 HOH A 151 751 168 HOH HOH . E 5 HOH A 152 752 151 HOH HOH . E 5 HOH A 153 753 133 HOH HOH . E 5 HOH A 154 754 189 HOH HOH . E 5 HOH A 155 755 104 HOH HOH . E 5 HOH A 156 756 125 HOH HOH . E 5 HOH A 157 757 67 HOH HOH . E 5 HOH A 158 758 94 HOH HOH . E 5 HOH A 159 759 75 HOH HOH . E 5 HOH A 160 760 156 HOH HOH . E 5 HOH A 161 761 155 HOH HOH . E 5 HOH A 162 762 158 HOH HOH . E 5 HOH A 163 763 167 HOH HOH . E 5 HOH A 164 764 170 HOH HOH . F 5 HOH B 1 701 37 HOH HOH . F 5 HOH B 2 702 56 HOH HOH . F 5 HOH B 3 703 78 HOH HOH . F 5 HOH B 4 704 175 HOH HOH . F 5 HOH B 5 705 159 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C7 FUW . . . D 4 -36.485 20.823 -5.247 1 37.04 ? C7 FUW 502 A 1 HETATM 2 C C8 FUW . . . D 4 -35.795 22.076 -5.749 1 28.65 ? C8 FUW 502 A 1 HETATM 3 C C9 FUW . . . D 4 -34.361 22.115 -5.25 1 30.86 ? C9 FUW 502 A 1 HETATM 4 O O1 FUW . . . D 4 -33.751 23.312 -5.702 1 30.95 ? O1 FUW 502 A 1 HETATM 5 C C1 FUW . . . D 4 -32.166 15.843 -5.145 1 48.12 ? C1 FUW 502 A 1 HETATM 6 C C5 FUW . . . D 4 -34.249 19.631 -5.482 1 31.62 ? C5 FUW 502 A 1 HETATM 7 C C6 FUW . . . D 4 -35.738 19.595 -5.739 1 30.72 ? C6 FUW 502 A 1 HETATM 8 C C4 FUW . . . D 4 -33.556 18.493 -5.259 1 33.23 ? C4 FUW 502 A 1 HETATM 9 C C3 FUW . . . D 4 -32.162 18.35 -4.993 1 41.36 ? C3 FUW 502 A 1 HETATM 10 C C2 FUW . . . D 4 -31.515 17.179 -4.92 1 41.65 ? C2 FUW 502 A 1 HETATM 11 C C FUW . . . D 4 -32.19 15.439 -6.602 1 40.28 ? C FUW 502 A 1 HETATM 12 O O FUW . . . D 4 -36.514 20.823 -3.804 1 33.56 ? O FUW 502 A 1 HETATM 13 C C10 FUW . . . D 4 -33.609 20.904 -5.745 1 33.38 ? C10 FUW 502 A 1 HETATM 14 C C11 FUW . . . D 4 -32.522 21.047 -6.487 1 36.9 ? C11 FUW 502 A 1 HETATM 15 C C12 FUW . . . D 4 -30.05 17.047 -4.791 1 42.21 ? C12 FUW 502 A 1 HETATM 16 C C13 FUW . . . D 4 -29.219 18.146 -4.986 1 45.5 ? C13 FUW 502 A 1 HETATM 17 C C14 FUW . . . D 4 -27.836 18.028 -4.868 1 47.19 ? C14 FUW 502 A 1 HETATM 18 C C15 FUW . . . D 4 -27.292 16.787 -4.581 1 46 ? C15 FUW 502 A 1 HETATM 19 C C16 FUW . . . D 4 -28.109 15.685 -4.397 1 50.19 ? C16 FUW 502 A 1 HETATM 20 C C17 FUW . . . D 4 -29.482 15.814 -4.493 1 47.11 ? C17 FUW 502 A 1 HETATM 21 C C18 FUW . . . D 4 -26.948 19.239 -5.02 1 41.36 ? C18 FUW 502 A 1 HETATM 22 C C19 FUW . . . D 4 -26.956 19.678 -6.495 1 45.21 ? C19 FUW 502 A 1 HETATM 23 C C20 FUW . . . D 4 -26.304 18.686 -7.37 1 46.52 ? C20 FUW 502 A 1 HETATM 24 C C21 FUW . . . D 4 -25.978 18.051 -8.345 1 48.44 ? C21 FUW 502 A 1 HETATM 25 C C22 FUW . . . D 4 -25.704 17.353 -9.602 1 46.06 ? C22 FUW 502 A 1 HETATM 26 C C23 FUW . . . D 4 -24.446 17.804 -10.372 1 40.51 ? C23 FUW 502 A 1 HETATM 27 C C24 FUW . . . D 4 -24.114 16.795 -11.453 1 42.25 ? C24 FUW 502 A 1 HETATM 28 C C25 FUW . . . D 4 -24.624 19.19 -10.968 1 42.28 ? C25 FUW 502 A 1 HETATM 29 O O2 FUW . . . D 4 -23.301 17.866 -9.501 1 44.35 ? O2 FUW 502 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 29 #