data_8PYN
#
_model_server_result.job_id            APJVXCHZqBhKqLz0-IHihw 
_model_server_result.datetime_utc      '2024-10-19 16:39:44' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8pyn 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":1304}' 
#
_entry.id    8PYN 
#
_exptl.entry_id    8PYN 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8PYN 
_cell.length_a            69.128 
_cell.length_b            69.128 
_cell.length_c            142.382 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8PYN 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OE2 GLU 74 AAA GLU 1046 1_555 E ZN ZN . AAA ZN 1304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.402 ? 
metalc ? metalc2 A SG CYS 87 AAA CYS 1059 1_555 C CD CD . AAA CD 1302 4_445 ? ? ? ? ? ? ? ? ? ? ? ? 2.44 ? 
metalc ? metalc3 A NE2 HIS 88 AAA HIS 1060 1_555 D NI NI . AAA NI 1303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? 
metalc ? metalc4 A NE2 HIS 89 AAA HIS 1061 1_555 D NI NI . AAA NI 1303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? 
metalc ? metalc5 A OD1 ASP 149 AAA ASP 1121 1_555 C CD CD . AAA CD 1302 4_445 ? ? ? ? ? ? ? ? ? ? ? ? 2.517 ? 
metalc ? metalc6 A OE1 GLU 190 AAA GLU 1162 1_555 C CD CD . AAA CD 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.603 ? 
metalc ? metalc7 A OE2 GLU 190 AAA GLU 1162 1_555 C CD CD . AAA CD 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.309 ? 
metalc ? metalc8 C CD CD . AAA CD 1302 1_555 F O HOH . AAA HOH 1414 3_454 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? 
metalc ? metalc9 C CD CD . AAA CD 1302 1_555 F O HOH . AAA HOH 1468 3_454 ? ? ? ? ? ? ? ? ? ? ? ? 2.456 ? 
metalc ? metalc10 D NI NI . AAA NI 1303 1_555 F O HOH . AAA HOH 1494 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? 
metalc ? metalc11 D NI NI . AAA NI 1303 1_555 F O HOH . AAA HOH 1506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.846 ? 
metalc ? metalc12 D NI NI . AAA NI 1303 1_555 F O HOH . AAA HOH 1527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? 
metalc ? metalc13 D NI NI . AAA NI 1303 1_555 F O HOH . AAA HOH 1532 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     8PYN 
_atom_sites.fract_transf_matrix[1][1]    0.014466 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014466 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007023 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ICV AAA 1 1301 3000 ICV INH . 
C 3 CD AAA 1 1302 1 CD CD . 
D 4 NI AAA 1 1303 2 NI NI . 
E 5 ZN AAA 1 1304 1 ZN ZN . 
F 6 HOH AAA 1 1401 113 HOH HOH . 
F 6 HOH AAA 2 1402 168 HOH HOH . 
F 6 HOH AAA 3 1403 126 HOH HOH . 
F 6 HOH AAA 4 1404 63 HOH HOH . 
F 6 HOH AAA 5 1405 67 HOH HOH . 
F 6 HOH AAA 6 1406 61 HOH HOH . 
F 6 HOH AAA 7 1407 96 HOH HOH . 
F 6 HOH AAA 8 1408 88 HOH HOH . 
F 6 HOH AAA 9 1409 159 HOH HOH . 
F 6 HOH AAA 10 1410 76 HOH HOH . 
F 6 HOH AAA 11 1411 137 HOH HOH . 
F 6 HOH AAA 12 1412 29 HOH HOH . 
F 6 HOH AAA 13 1413 128 HOH HOH . 
F 6 HOH AAA 14 1414 89 HOH HOH . 
F 6 HOH AAA 15 1415 20 HOH HOH . 
F 6 HOH AAA 16 1416 68 HOH HOH . 
F 6 HOH AAA 17 1417 103 HOH HOH . 
F 6 HOH AAA 18 1418 22 HOH HOH . 
F 6 HOH AAA 19 1419 27 HOH HOH . 
F 6 HOH AAA 20 1420 21 HOH HOH . 
F 6 HOH AAA 21 1421 43 HOH HOH . 
F 6 HOH AAA 22 1422 116 HOH HOH . 
F 6 HOH AAA 23 1423 106 HOH HOH . 
F 6 HOH AAA 24 1424 156 HOH HOH . 
F 6 HOH AAA 25 1425 112 HOH HOH . 
F 6 HOH AAA 26 1426 151 HOH HOH . 
F 6 HOH AAA 27 1427 35 HOH HOH . 
F 6 HOH AAA 28 1428 66 HOH HOH . 
F 6 HOH AAA 29 1429 162 HOH HOH . 
F 6 HOH AAA 30 1430 4 HOH HOH . 
F 6 HOH AAA 31 1431 38 HOH HOH . 
F 6 HOH AAA 32 1432 78 HOH HOH . 
F 6 HOH AAA 33 1433 15 HOH HOH . 
F 6 HOH AAA 34 1434 87 HOH HOH . 
F 6 HOH AAA 35 1435 105 HOH HOH . 
F 6 HOH AAA 36 1436 10 HOH HOH . 
F 6 HOH AAA 37 1437 19 HOH HOH . 
F 6 HOH AAA 38 1438 52 HOH HOH . 
F 6 HOH AAA 39 1439 70 HOH HOH . 
F 6 HOH AAA 40 1440 34 HOH HOH . 
F 6 HOH AAA 41 1441 57 HOH HOH . 
F 6 HOH AAA 42 1442 150 HOH HOH . 
F 6 HOH AAA 43 1443 65 HOH HOH . 
F 6 HOH AAA 44 1444 72 HOH HOH . 
F 6 HOH AAA 45 1445 3 HOH HOH . 
F 6 HOH AAA 46 1446 30 HOH HOH . 
F 6 HOH AAA 47 1447 1 HOH HOH . 
F 6 HOH AAA 48 1448 154 HOH HOH . 
F 6 HOH AAA 49 1449 5 HOH HOH . 
F 6 HOH AAA 50 1450 2 HOH HOH . 
F 6 HOH AAA 51 1451 104 HOH HOH . 
F 6 HOH AAA 52 1452 98 HOH HOH . 
F 6 HOH AAA 53 1453 69 HOH HOH . 
F 6 HOH AAA 54 1454 54 HOH HOH . 
F 6 HOH AAA 55 1455 7 HOH HOH . 
F 6 HOH AAA 56 1456 160 HOH HOH . 
F 6 HOH AAA 57 1457 40 HOH HOH . 
F 6 HOH AAA 58 1458 14 HOH HOH . 
F 6 HOH AAA 59 1459 129 HOH HOH . 
F 6 HOH AAA 60 1460 111 HOH HOH . 
F 6 HOH AAA 61 1461 6 HOH HOH . 
F 6 HOH AAA 62 1462 41 HOH HOH . 
F 6 HOH AAA 63 1463 108 HOH HOH . 
F 6 HOH AAA 64 1464 114 HOH HOH . 
F 6 HOH AAA 65 1465 11 HOH HOH . 
F 6 HOH AAA 66 1466 110 HOH HOH . 
F 6 HOH AAA 67 1467 49 HOH HOH . 
F 6 HOH AAA 68 1468 82 HOH HOH . 
F 6 HOH AAA 69 1469 71 HOH HOH . 
F 6 HOH AAA 70 1470 153 HOH HOH . 
F 6 HOH AAA 71 1471 64 HOH HOH . 
F 6 HOH AAA 72 1472 145 HOH HOH . 
F 6 HOH AAA 73 1473 109 HOH HOH . 
F 6 HOH AAA 74 1474 25 HOH HOH . 
F 6 HOH AAA 75 1475 24 HOH HOH . 
F 6 HOH AAA 76 1476 102 HOH HOH . 
F 6 HOH AAA 77 1477 121 HOH HOH . 
F 6 HOH AAA 78 1478 9 HOH HOH . 
F 6 HOH AAA 79 1479 58 HOH HOH . 
F 6 HOH AAA 80 1480 51 HOH HOH . 
F 6 HOH AAA 81 1481 18 HOH HOH . 
F 6 HOH AAA 82 1482 50 HOH HOH . 
F 6 HOH AAA 83 1483 73 HOH HOH . 
F 6 HOH AAA 84 1484 97 HOH HOH . 
F 6 HOH AAA 85 1485 56 HOH HOH . 
F 6 HOH AAA 86 1486 13 HOH HOH . 
F 6 HOH AAA 87 1487 84 HOH HOH . 
F 6 HOH AAA 88 1488 37 HOH HOH . 
F 6 HOH AAA 89 1489 46 HOH HOH . 
F 6 HOH AAA 90 1490 83 HOH HOH . 
F 6 HOH AAA 91 1491 125 HOH HOH . 
F 6 HOH AAA 92 1492 47 HOH HOH . 
F 6 HOH AAA 93 1493 26 HOH HOH . 
F 6 HOH AAA 94 1494 140 HOH HOH . 
F 6 HOH AAA 95 1495 23 HOH HOH . 
F 6 HOH AAA 96 1496 124 HOH HOH . 
F 6 HOH AAA 97 1497 16 HOH HOH . 
F 6 HOH AAA 98 1498 12 HOH HOH . 
F 6 HOH AAA 99 1499 152 HOH HOH . 
F 6 HOH AAA 100 1500 147 HOH HOH . 
F 6 HOH AAA 101 1501 136 HOH HOH . 
F 6 HOH AAA 102 1502 122 HOH HOH . 
F 6 HOH AAA 103 1503 45 HOH HOH . 
F 6 HOH AAA 104 1504 48 HOH HOH . 
F 6 HOH AAA 105 1505 91 HOH HOH . 
F 6 HOH AAA 106 1506 138 HOH HOH . 
F 6 HOH AAA 107 1507 55 HOH HOH . 
F 6 HOH AAA 108 1508 33 HOH HOH . 
F 6 HOH AAA 109 1509 93 HOH HOH . 
F 6 HOH AAA 110 1510 170 HOH HOH . 
F 6 HOH AAA 111 1511 144 HOH HOH . 
F 6 HOH AAA 112 1512 80 HOH HOH . 
F 6 HOH AAA 113 1513 146 HOH HOH . 
F 6 HOH AAA 114 1514 123 HOH HOH . 
F 6 HOH AAA 115 1515 28 HOH HOH . 
F 6 HOH AAA 116 1516 31 HOH HOH . 
F 6 HOH AAA 117 1517 118 HOH HOH . 
F 6 HOH AAA 118 1518 163 HOH HOH . 
F 6 HOH AAA 119 1519 99 HOH HOH . 
F 6 HOH AAA 120 1520 107 HOH HOH . 
F 6 HOH AAA 121 1521 44 HOH HOH . 
F 6 HOH AAA 122 1522 133 HOH HOH . 
F 6 HOH AAA 123 1523 95 HOH HOH . 
F 6 HOH AAA 124 1524 79 HOH HOH . 
F 6 HOH AAA 125 1525 143 HOH HOH . 
F 6 HOH AAA 126 1526 75 HOH HOH . 
F 6 HOH AAA 127 1527 141 HOH HOH . 
F 6 HOH AAA 128 1528 127 HOH HOH . 
F 6 HOH AAA 129 1529 36 HOH HOH . 
F 6 HOH AAA 130 1530 157 HOH HOH . 
F 6 HOH AAA 131 1531 32 HOH HOH . 
F 6 HOH AAA 132 1532 139 HOH HOH . 
F 6 HOH AAA 133 1533 8 HOH HOH . 
F 6 HOH AAA 134 1534 39 HOH HOH . 
F 6 HOH AAA 135 1535 85 HOH HOH . 
F 6 HOH AAA 136 1536 164 HOH HOH . 
F 6 HOH AAA 137 1537 101 HOH HOH . 
F 6 HOH AAA 138 1538 135 HOH HOH . 
F 6 HOH AAA 139 1539 17 HOH HOH . 
F 6 HOH AAA 140 1540 60 HOH HOH . 
F 6 HOH AAA 141 1541 42 HOH HOH . 
F 6 HOH AAA 142 1542 161 HOH HOH . 
F 6 HOH AAA 143 1543 77 HOH HOH . 
F 6 HOH AAA 144 1544 120 HOH HOH . 
F 6 HOH AAA 145 1545 167 HOH HOH . 
F 6 HOH AAA 146 1546 149 HOH HOH . 
F 6 HOH AAA 147 1547 74 HOH HOH . 
F 6 HOH AAA 148 1548 94 HOH HOH . 
F 6 HOH AAA 149 1549 169 HOH HOH . 
F 6 HOH AAA 150 1550 81 HOH HOH . 
F 6 HOH AAA 151 1551 165 HOH HOH . 
F 6 HOH AAA 152 1552 134 HOH HOH . 
F 6 HOH AAA 153 1553 53 HOH HOH . 
F 6 HOH AAA 154 1554 119 HOH HOH . 
F 6 HOH AAA 155 1555 172 HOH HOH . 
F 6 HOH AAA 156 1556 90 HOH HOH . 
F 6 HOH AAA 157 1557 100 HOH HOH . 
F 6 HOH AAA 158 1558 166 HOH HOH . 
F 6 HOH AAA 159 1559 132 HOH HOH . 
F 6 HOH AAA 160 1560 86 HOH HOH . 
F 6 HOH AAA 161 1561 171 HOH HOH . 
F 6 HOH AAA 162 1562 131 HOH HOH . 
F 6 HOH AAA 163 1563 158 HOH HOH . 
F 6 HOH AAA 164 1564 155 HOH HOH . 
F 6 HOH AAA 165 1565 117 HOH HOH . 
F 6 HOH AAA 166 1566 148 HOH HOH . 
F 6 HOH AAA 167 1567 62 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         E 
_atom_site.label_entity_id       5 
_atom_site.Cartn_x               -33.511 
_atom_site.Cartn_y               -16.694 
_atom_site.Cartn_z               -25.635 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        116.99 
_atom_site.pdbx_formal_charge    2 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           1304 
_atom_site.auth_asym_id          AAA 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           331 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#