data_8PYP # _model_server_result.job_id BvzIoyL5t_CFPIRGTgu6iw _model_server_result.datetime_utc '2024-10-19 13:40:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8pyp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":203}' # _entry.id 8PYP # _exptl.entry_id 8PYP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 35.453 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHLORIDE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8PYP _cell.length_a 79.2 _cell.length_b 79.2 _cell.length_c 38.2 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8PYP _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall 'P 4nw 2abw' _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 127 A CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf2 A SG CYS 30 A CYS 30 1_555 A SG CYS 115 A CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf3 A SG CYS 64 A CYS 64 1_555 A SG CYS 80 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf4 A SG CYS 76 A CYS 76 1_555 A SG CYS 94 A CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? metalc ? metalc1 A O SER 60 A SER 60 1_555 E NA NA . A NA 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? metalc ? metalc2 A O CYS 64 A CYS 64 1_555 E NA NA . A NA 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? metalc ? metalc3 A OG SER 72 A SER 72 1_555 E NA NA . A NA 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.486 ? metalc ? metalc4 A O ARG 73 A ARG 73 1_555 E NA NA . A NA 204 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.486 ? metalc ? metalc5 A O ARG 73 A ARG 73 1_555 E NA NA . A NA 204 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.469 ? metalc ? metalc6 E NA NA . A NA 204 1_555 F O HOH . A HOH 347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.553 ? metalc ? metalc7 E NA NA . A NA 204 1_555 F O HOH . A HOH 362 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.53 ? # _chem_comp.formula 'Cl -1' _chem_comp.formula_weight 35.453 _chem_comp.id CL _chem_comp.mon_nstd_flag . _chem_comp.name 'CHLORIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8PYP _atom_sites.fract_transf_matrix[1][1] 0.012626 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012626 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.026178 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL A 1 201 202 CL CL . C 2 CL A 1 202 203 CL CL . D 2 CL A 1 203 204 CL CL . E 3 NA A 1 204 205 NA NA . F 4 HOH A 1 301 78 HOH HOH . F 4 HOH A 2 302 105 HOH HOH . F 4 HOH A 3 303 19 HOH HOH . F 4 HOH A 4 304 28 HOH HOH . F 4 HOH A 5 305 53 HOH HOH . F 4 HOH A 6 306 35 HOH HOH . F 4 HOH A 7 307 62 HOH HOH . F 4 HOH A 8 308 29 HOH HOH . F 4 HOH A 9 309 9 HOH HOH . F 4 HOH A 10 310 42 HOH HOH . F 4 HOH A 11 311 41 HOH HOH . F 4 HOH A 12 312 80 HOH HOH . F 4 HOH A 13 313 2 HOH HOH . F 4 HOH A 14 314 25 HOH HOH . F 4 HOH A 15 315 33 HOH HOH . F 4 HOH A 16 316 1 HOH HOH . F 4 HOH A 17 317 38 HOH HOH . F 4 HOH A 18 318 21 HOH HOH . F 4 HOH A 19 319 61 HOH HOH . F 4 HOH A 20 320 8 HOH HOH . F 4 HOH A 21 321 76 HOH HOH . F 4 HOH A 22 322 60 HOH HOH . F 4 HOH A 23 323 85 HOH HOH . F 4 HOH A 24 324 39 HOH HOH . F 4 HOH A 25 325 63 HOH HOH . F 4 HOH A 26 326 12 HOH HOH . F 4 HOH A 27 327 104 HOH HOH . F 4 HOH A 28 328 49 HOH HOH . F 4 HOH A 29 329 65 HOH HOH . F 4 HOH A 30 330 64 HOH HOH . F 4 HOH A 31 331 14 HOH HOH . F 4 HOH A 32 332 48 HOH HOH . F 4 HOH A 33 333 44 HOH HOH . F 4 HOH A 34 334 26 HOH HOH . F 4 HOH A 35 335 37 HOH HOH . F 4 HOH A 36 336 31 HOH HOH . F 4 HOH A 37 337 74 HOH HOH . F 4 HOH A 38 338 59 HOH HOH . F 4 HOH A 39 339 3 HOH HOH . F 4 HOH A 40 340 13 HOH HOH . F 4 HOH A 41 341 77 HOH HOH . F 4 HOH A 42 342 95 HOH HOH . F 4 HOH A 43 343 24 HOH HOH . F 4 HOH A 44 344 47 HOH HOH . F 4 HOH A 45 345 7 HOH HOH . F 4 HOH A 46 346 67 HOH HOH . F 4 HOH A 47 347 4 HOH HOH . F 4 HOH A 48 348 46 HOH HOH . F 4 HOH A 49 349 15 HOH HOH . F 4 HOH A 50 350 27 HOH HOH . F 4 HOH A 51 351 34 HOH HOH . F 4 HOH A 52 352 100 HOH HOH . F 4 HOH A 53 353 97 HOH HOH . F 4 HOH A 54 354 11 HOH HOH . F 4 HOH A 55 355 18 HOH HOH . F 4 HOH A 56 356 32 HOH HOH . F 4 HOH A 57 357 55 HOH HOH . F 4 HOH A 58 358 45 HOH HOH . F 4 HOH A 59 359 20 HOH HOH . F 4 HOH A 60 360 69 HOH HOH . F 4 HOH A 61 361 94 HOH HOH . F 4 HOH A 62 362 10 HOH HOH . F 4 HOH A 63 363 54 HOH HOH . F 4 HOH A 64 364 16 HOH HOH . F 4 HOH A 65 365 23 HOH HOH . F 4 HOH A 66 366 36 HOH HOH . F 4 HOH A 67 367 56 HOH HOH . F 4 HOH A 68 368 5 HOH HOH . F 4 HOH A 69 369 98 HOH HOH . F 4 HOH A 70 370 17 HOH HOH . F 4 HOH A 71 371 30 HOH HOH . F 4 HOH A 72 372 101 HOH HOH . F 4 HOH A 73 373 106 HOH HOH . F 4 HOH A 74 374 75 HOH HOH . F 4 HOH A 75 375 66 HOH HOH . F 4 HOH A 76 376 6 HOH HOH . F 4 HOH A 77 377 58 HOH HOH . F 4 HOH A 78 378 57 HOH HOH . F 4 HOH A 79 379 40 HOH HOH . F 4 HOH A 80 380 43 HOH HOH . F 4 HOH A 81 381 52 HOH HOH . F 4 HOH A 82 382 90 HOH HOH . F 4 HOH A 83 383 50 HOH HOH . F 4 HOH A 84 384 51 HOH HOH . F 4 HOH A 85 385 103 HOH HOH . F 4 HOH A 86 386 73 HOH HOH . F 4 HOH A 87 387 71 HOH HOH . F 4 HOH A 88 388 84 HOH HOH . F 4 HOH A 89 389 81 HOH HOH . F 4 HOH A 90 390 99 HOH HOH . F 4 HOH A 91 391 86 HOH HOH . F 4 HOH A 92 392 83 HOH HOH . F 4 HOH A 93 393 68 HOH HOH . F 4 HOH A 94 394 72 HOH HOH . F 4 HOH A 95 395 87 HOH HOH . F 4 HOH A 96 396 91 HOH HOH . F 4 HOH A 97 397 93 HOH HOH . F 4 HOH A 98 398 107 HOH HOH . F 4 HOH A 99 399 96 HOH HOH . F 4 HOH A 100 400 89 HOH HOH . F 4 HOH A 101 401 79 HOH HOH . F 4 HOH A 102 402 88 HOH HOH . F 4 HOH A 103 403 70 HOH HOH . F 4 HOH A 104 404 102 HOH HOH . F 4 HOH A 105 405 22 HOH HOH . F 4 HOH A 106 406 92 HOH HOH . F 4 HOH A 107 407 82 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CL _atom_site.label_atom_id CL _atom_site.label_comp_id CL _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x -11.954 _atom_site.Cartn_y 11.682 _atom_site.Cartn_z 4.523 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 36.45 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CL _atom_site.auth_comp_id CL _atom_site.auth_seq_id 203 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 342 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #