data_8PYV # _model_server_result.job_id 1fspKJtvTcatTNQCpjyqnA _model_server_result.datetime_utc '2024-11-18 10:27:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8pyv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":202}' # _entry.id 8PYV # _exptl.entry_id 8PYV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 256.424 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PALMITIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8PYV _cell.length_a 77.2 _cell.length_b 77.2 _cell.length_c 122.06 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8PYV _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall 'R 3' _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # _chem_comp.formula 'C16 H32 O2' _chem_comp.formula_weight 256.424 _chem_comp.id PLM _chem_comp.mon_nstd_flag . _chem_comp.name 'PALMITIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PLM sing 323 n n C1 O2 PLM doub 324 n n C1 C2 PLM sing 325 n n O1 H PLM sing 326 n n C2 C3 PLM sing 327 n n C2 H21 PLM sing 328 n n C2 H22 PLM sing 329 n n C3 C4 PLM sing 330 n n C3 H31 PLM sing 331 n n C3 H32 PLM sing 332 n n C4 C5 PLM sing 333 n n C4 H41 PLM sing 334 n n C4 H42 PLM sing 335 n n C5 C6 PLM sing 336 n n C5 H51 PLM sing 337 n n C5 H52 PLM sing 338 n n C6 C7 PLM sing 339 n n C6 H61 PLM sing 340 n n C6 H62 PLM sing 341 n n C7 C8 PLM sing 342 n n C7 H71 PLM sing 343 n n C7 H72 PLM sing 344 n n C8 C9 PLM sing 345 n n C8 H81 PLM sing 346 n n C8 H82 PLM sing 347 n n C9 CA PLM sing 348 n n C9 H91 PLM sing 349 n n C9 H92 PLM sing 350 n n CA CB PLM sing 351 n n CA HA1 PLM sing 352 n n CA HA2 PLM sing 353 n n CB CC PLM sing 354 n n CB HB1 PLM sing 355 n n CB HB2 PLM sing 356 n n CC CD PLM sing 357 n n CC HC1 PLM sing 358 n n CC HC2 PLM sing 359 n n CD CE PLM sing 360 n n CD HD1 PLM sing 361 n n CD HD2 PLM sing 362 n n CE CF PLM sing 363 n n CE HE1 PLM sing 364 n n CE HE2 PLM sing 365 n n CF CG PLM sing 366 n n CF HF1 PLM sing 367 n n CF HF2 PLM sing 368 n n CG HG1 PLM sing 369 n n CG HG2 PLM sing 370 n n CG HG3 PLM sing 371 n n # _atom_sites.entry_id 8PYV _atom_sites.fract_transf_matrix[1][1] 0.012953 _atom_sites.fract_transf_matrix[1][2] 0.007479 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014957 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008193 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PLM A 1 201 202 PLM PLM . C 2 PLM A 1 202 203 PLM PLM . D 3 48T A 1 203 1153 48T 48T . E 4 HOH A 1 301 3 HOH WAT . E 4 HOH A 2 302 54 HOH WAT . E 4 HOH A 3 303 33 HOH WAT . E 4 HOH A 4 304 13 HOH WAT . E 4 HOH A 5 305 29 HOH WAT . E 4 HOH A 6 306 47 HOH WAT . E 4 HOH A 7 307 36 HOH WAT . E 4 HOH A 8 308 32 HOH WAT . E 4 HOH A 9 309 49 HOH WAT . E 4 HOH A 10 310 40 HOH WAT . E 4 HOH A 11 311 23 HOH WAT . E 4 HOH A 12 312 12 HOH WAT . E 4 HOH A 13 313 4 HOH WAT . E 4 HOH A 14 314 21 HOH WAT . E 4 HOH A 15 315 31 HOH WAT . E 4 HOH A 16 316 18 HOH WAT . E 4 HOH A 17 317 6 HOH WAT . E 4 HOH A 18 318 37 HOH WAT . E 4 HOH A 19 319 59 HOH WAT . E 4 HOH A 20 320 15 HOH WAT . E 4 HOH A 21 321 5 HOH WAT . E 4 HOH A 22 322 11 HOH WAT . E 4 HOH A 23 323 17 HOH WAT . E 4 HOH A 24 324 52 HOH WAT . E 4 HOH A 25 325 20 HOH WAT . E 4 HOH A 26 326 35 HOH WAT . E 4 HOH A 27 327 34 HOH WAT . E 4 HOH A 28 328 57 HOH WAT . E 4 HOH A 29 329 39 HOH WAT . E 4 HOH A 30 330 60 HOH WAT . E 4 HOH A 31 331 24 HOH WAT . E 4 HOH A 32 332 42 HOH WAT . E 4 HOH A 33 333 48 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PLM . . . C 2 16.653 5.298 36.53 1 37.44 ? C1 PLM 202 A 1 HETATM 2 O O1 PLM . . . C 2 16.094 4.176 36.441 1 34.76 ? O1 PLM 202 A 1 HETATM 3 C C2 PLM . . . C 2 17.528 5.469 37.822 1 39.02 ? C2 PLM 202 A 1 HETATM 4 C C3 PLM . . . C 2 18.542 6.63 37.854 1 44.95 ? C3 PLM 202 A 1 HETATM 5 C C4 PLM . . . C 2 19.18 6.863 39.251 1 47.89 ? C4 PLM 202 A 1 HETATM 6 C C5 PLM . . . C 2 19.842 8.252 39.422 1 52.06 ? C5 PLM 202 A 1 HETATM 7 C C6 PLM . . . C 2 19.86 8.817 40.861 1 52.23 ? C6 PLM 202 A 1 HETATM 8 C C7 PLM . . . C 2 20.643 10.137 41.007 1 57.98 ? C7 PLM 202 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 244 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 8 #