data_8Q1H # _model_server_result.job_id IhI3bn2bs0o_Hh7NlyrAwA _model_server_result.datetime_utc '2024-11-05 04:47:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8q1h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":901}' # _entry.id 8Q1H # _exptl.entry_id 8Q1H _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8Q1H _cell.length_a 118.061 _cell.length_b 179.354 _cell.length_c 233.055 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8Q1H _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 83 n n PA O2A FAD sing 84 n n PA O5B FAD sing 85 n n PA O3P FAD sing 86 n n O2A HOA2 FAD sing 87 n n O5B C5B FAD sing 88 n n C5B C4B FAD sing 89 n n C5B H51A FAD sing 90 n n C5B H52A FAD sing 91 n n C4B O4B FAD sing 92 n n C4B C3B FAD sing 93 n n C4B H4B FAD sing 94 n n O4B C1B FAD sing 95 n n C3B O3B FAD sing 96 n n C3B C2B FAD sing 97 n n C3B H3B FAD sing 98 n n O3B HO3A FAD sing 99 n n C2B O2B FAD sing 100 n n C2B C1B FAD sing 101 n n C2B H2B FAD sing 102 n n O2B HO2A FAD sing 103 n n C1B N9A FAD sing 104 n n C1B H1B FAD sing 105 n n N9A C8A FAD sing 106 n y N9A C4A FAD sing 107 n y C8A N7A FAD doub 108 n y C8A H8A FAD sing 109 n n N7A C5A FAD sing 110 n y C5A C6A FAD sing 111 n y C5A C4A FAD doub 112 n y C6A N6A FAD sing 113 n n C6A N1A FAD doub 114 n y N6A H61A FAD sing 115 n n N6A H62A FAD sing 116 n n N1A C2A FAD sing 117 n y C2A N3A FAD doub 118 n y C2A H2A FAD sing 119 n n N3A C4A FAD sing 120 n y N1 C2 FAD sing 121 n n N1 C10 FAD doub 122 n n C2 O2 FAD doub 123 n n C2 N3 FAD sing 124 n n N3 C4 FAD sing 125 n n N3 HN3 FAD sing 126 n n C4 O4 FAD doub 127 n n C4 C4X FAD sing 128 n n C4X N5 FAD doub 129 n n C4X C10 FAD sing 130 n n N5 C5X FAD sing 131 n n C5X C6 FAD doub 132 n y C5X C9A FAD sing 133 n y C6 C7 FAD sing 134 n y C6 H6 FAD sing 135 n n C7 C7M FAD sing 136 n n C7 C8 FAD doub 137 n y C7M HM71 FAD sing 138 n n C7M HM72 FAD sing 139 n n C7M HM73 FAD sing 140 n n C8 C8M FAD sing 141 n n C8 C9 FAD sing 142 n y C8M HM81 FAD sing 143 n n C8M HM82 FAD sing 144 n n C8M HM83 FAD sing 145 n n C9 C9A FAD doub 146 n y C9 H9 FAD sing 147 n n C9A N10 FAD sing 148 n n N10 C10 FAD sing 149 n n N10 C1' FAD sing 150 n n C1' C2' FAD sing 151 n n C1' "H1'1" FAD sing 152 n n C1' "H1'2" FAD sing 153 n n C2' O2' FAD sing 154 n n C2' C3' FAD sing 155 n n C2' H2' FAD sing 156 n n O2' HO2' FAD sing 157 n n C3' O3' FAD sing 158 n n C3' C4' FAD sing 159 n n C3' H3' FAD sing 160 n n O3' HO3' FAD sing 161 n n C4' O4' FAD sing 162 n n C4' C5' FAD sing 163 n n C4' H4' FAD sing 164 n n O4' HO4' FAD sing 165 n n C5' O5' FAD sing 166 n n C5' "H5'1" FAD sing 167 n n C5' "H5'2" FAD sing 168 n n O5' P FAD sing 169 n n P O1P FAD doub 170 n n P O2P FAD sing 171 n n P O3P FAD sing 172 n n O2P HOP2 FAD sing 173 n n # _atom_sites.entry_id 8Q1H _atom_sites.fract_transf_matrix[1][1] 0.00847 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005576 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004291 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id D _pdbx_nonpoly_scheme.entity_id 4 _pdbx_nonpoly_scheme.mon_id FAD _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 901 _pdbx_nonpoly_scheme.auth_seq_num 1837 _pdbx_nonpoly_scheme.pdb_mon_id FAD _pdbx_nonpoly_scheme.auth_mon_id FAD _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . D 4 -6.513 67.833 87.849 1 62.26 ? PA FAD 901 A 1 HETATM 2 O O1A FAD . . . D 4 -5.682 68.352 86.737 1 61.44 ? O1A FAD 901 A 1 HETATM 3 O O2A FAD . . . D 4 -7.851 67.072 87.66 1 66.28 ? O2A FAD 901 A 1 HETATM 4 O O5B FAD . . . D 4 -6.846 69.063 88.776 1 71.42 ? O5B FAD 901 A 1 HETATM 5 C C5B FAD . . . D 4 -5.918 70.159 88.935 1 68 ? C5B FAD 901 A 1 HETATM 6 C C4B FAD . . . D 4 -6.664 71.449 88.737 1 61.2 ? C4B FAD 901 A 1 HETATM 7 O O4B FAD . . . D 4 -5.772 72.549 88.997 1 63.01 ? O4B FAD 901 A 1 HETATM 8 C C3B FAD . . . D 4 -7.217 71.664 87.324 1 65.16 ? C3B FAD 901 A 1 HETATM 9 O O3B FAD . . . D 4 -8.604 71.993 87.342 1 65.52 ? O3B FAD 901 A 1 HETATM 10 C C2B FAD . . . D 4 -6.32 72.775 86.762 1 67.44 ? C2B FAD 901 A 1 HETATM 11 O O2B FAD . . . D 4 -6.935 73.621 85.796 1 66.28 ? O2B FAD 901 A 1 HETATM 12 C C1B FAD . . . D 4 -6.037 73.548 88.038 1 68.01 ? C1B FAD 901 A 1 HETATM 13 N N9A FAD . . . D 4 -4.905 74.459 87.964 1 61.76 ? N9A FAD 901 A 1 HETATM 14 C C8A FAD . . . D 4 -3.697 74.23 87.359 1 63.34 ? C8A FAD 901 A 1 HETATM 15 N N7A FAD . . . D 4 -2.853 75.229 87.455 1 63.82 ? N7A FAD 901 A 1 HETATM 16 C C5A FAD . . . D 4 -3.559 76.185 88.175 1 64.3 ? C5A FAD 901 A 1 HETATM 17 C C6A FAD . . . D 4 -3.221 77.475 88.617 1 58.05 ? C6A FAD 901 A 1 HETATM 18 N N6A FAD . . . D 4 -2.036 78.047 88.388 1 53.95 ? N6A FAD 901 A 1 HETATM 19 N N1A FAD . . . D 4 -4.151 78.16 89.318 1 54.94 ? N1A FAD 901 A 1 HETATM 20 C C2A FAD . . . D 4 -5.334 77.587 89.555 1 56.27 ? C2A FAD 901 A 1 HETATM 21 N N3A FAD . . . D 4 -5.767 76.38 89.186 1 59.91 ? N3A FAD 901 A 1 HETATM 22 C C4A FAD . . . D 4 -4.822 75.719 88.501 1 60.36 ? C4A FAD 901 A 1 HETATM 23 N N1 FAD . . . D 4 -7.994 58.295 84.814 1 74.12 ? N1 FAD 901 A 1 HETATM 24 C C2 FAD . . . D 4 -8.816 57.215 84.955 1 72.41 ? C2 FAD 901 A 1 HETATM 25 O O2 FAD . . . D 4 -9.045 56.707 86.064 1 69.9 ? O2 FAD 901 A 1 HETATM 26 N N3 FAD . . . D 4 -9.412 56.667 83.829 1 77.54 ? N3 FAD 901 A 1 HETATM 27 C C4 FAD . . . D 4 -9.277 57.116 82.529 1 74.26 ? C4 FAD 901 A 1 HETATM 28 O O4 FAD . . . D 4 -9.856 56.537 81.61 1 73.64 ? O4 FAD 901 A 1 HETATM 29 C C4X FAD . . . D 4 -8.393 58.254 82.394 1 74.79 ? C4X FAD 901 A 1 HETATM 30 N N5 FAD . . . D 4 -8.209 58.751 81.196 1 77.95 ? N5 FAD 901 A 1 HETATM 31 C C5X FAD . . . D 4 -7.388 59.862 81.067 1 73.09 ? C5X FAD 901 A 1 HETATM 32 C C6 FAD . . . D 4 -7.176 60.394 79.796 1 71.89 ? C6 FAD 901 A 1 HETATM 33 C C7 FAD . . . D 4 -6.362 61.507 79.612 1 78.25 ? C7 FAD 901 A 1 HETATM 34 C C7M FAD . . . D 4 -6.157 62.062 78.228 1 71 ? C7M FAD 901 A 1 HETATM 35 C C8 FAD . . . D 4 -5.734 62.1 80.722 1 84.6 ? C8 FAD 901 A 1 HETATM 36 C C8M FAD . . . D 4 -4.859 63.316 80.551 1 70.9 ? C8M FAD 901 A 1 HETATM 37 C C9 FAD . . . D 4 -5.942 61.569 81.995 1 80.58 ? C9 FAD 901 A 1 HETATM 38 C C9A FAD . . . D 4 -6.757 60.456 82.171 1 77.83 ? C9A FAD 901 A 1 HETATM 39 N N10 FAD . . . D 4 -6.994 59.901 83.447 1 80.53 ? N10 FAD 901 A 1 HETATM 40 C C10 FAD . . . D 4 -7.807 58.788 83.593 1 76.85 ? C10 FAD 901 A 1 HETATM 41 C C1' FAD . . . D 4 -6.352 60.471 84.645 1 71.33 ? C1' FAD 901 A 1 HETATM 42 C C2' FAD . . . D 4 -7.243 61.443 85.402 1 68.13 ? C2' FAD 901 A 1 HETATM 43 O O2' FAD . . . D 4 -7.863 62.32 84.462 1 69.77 ? O2' FAD 901 A 1 HETATM 44 C C3' FAD . . . D 4 -6.378 62.234 86.385 1 70.92 ? C3' FAD 901 A 1 HETATM 45 O O3' FAD . . . D 4 -5.524 61.325 87.078 1 69.9 ? O3' FAD 901 A 1 HETATM 46 C C4' FAD . . . D 4 -7.119 63.113 87.399 1 67.68 ? C4' FAD 901 A 1 HETATM 47 O O4' FAD . . . D 4 -8.274 63.708 86.805 1 67.97 ? O4' FAD 901 A 1 HETATM 48 C C5' FAD . . . D 4 -6.21 64.191 87.951 1 68.78 ? C5' FAD 901 A 1 HETATM 49 O O5' FAD . . . D 4 -6.844 64.824 89.083 1 64.52 ? O5' FAD 901 A 1 HETATM 50 P P FAD . . . D 4 -6.079 65.912 89.932 1 66.42 ? P FAD 901 A 1 HETATM 51 O O1P FAD . . . D 4 -7.241 66.428 90.791 1 63.49 ? O1P FAD 901 A 1 HETATM 52 O O2P FAD . . . D 4 -4.871 65.51 90.738 1 62.16 ? O2P FAD 901 A 1 HETATM 53 O O3P FAD . . . D 4 -5.618 66.961 88.818 1 64.49 ? O3P FAD 901 A 1 # _model_server_stats.io_time_ms 44 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 267 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 53 #