data_8Q1Z # _model_server_result.job_id yczOHTWlRYpfHohWBPgB5Q _model_server_result.datetime_utc '2024-11-22 23:54:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8q1z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 8Q1Z # _exptl.entry_id 8Q1Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 347.417 _entity.id 2 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 2-[4-[[4-[(3-~{tert}-butyl-1~{H}-pyrazol-5-yl)amino]pyrimidin-2-yl]amino]phenyl]ethanenitrile _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8Q1Z _cell.length_a 56.732 _cell.length_b 71.031 _cell.length_c 158.03 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8Q1Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C19 H21 N7' _chem_comp.formula_weight 347.417 _chem_comp.id IKD _chem_comp.mon_nstd_flag . _chem_comp.name 2-[4-[[4-[(3-~{tert}-butyl-1~{H}-pyrazol-5-yl)amino]pyrimidin-2-yl]amino]phenyl]ethanenitrile _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N6 N7 IKD sing 152 n y N6 C7 IKD sing 153 n y N7 C5 IKD doub 154 n y N1 C7 IKD sing 155 n n N1 C8 IKD sing 156 n n C7 C6 IKD doub 157 n y C8 C9 IKD doub 158 n y C8 N5 IKD sing 159 n y C5 C6 IKD sing 160 n y C5 C2 IKD sing 161 n n C1 C2 IKD sing 162 n n C9 C10 IKD sing 163 n y C4 C2 IKD sing 164 n n N5 C11 IKD doub 165 n y C2 C3 IKD sing 166 n n C10 N2 IKD doub 167 n y C11 N2 IKD sing 168 n y C11 N3 IKD sing 169 n n N3 C12 IKD sing 170 n n C19 C18 IKD doub 171 n y C19 C12 IKD sing 172 n y C18 C15 IKD sing 173 n y C12 C13 IKD doub 174 n y C15 C16 IKD sing 175 n n C15 C14 IKD doub 176 n y C13 C14 IKD sing 177 n y C16 C17 IKD sing 178 n n C17 N4 IKD trip 179 n n N1 H1 IKD sing 180 n n N3 H2 IKD sing 181 n n C4 H3 IKD sing 182 n n C4 H4 IKD sing 183 n n C4 H5 IKD sing 184 n n C6 H6 IKD sing 185 n n C10 H7 IKD sing 186 n n C13 H8 IKD sing 187 n n C1 H9 IKD sing 188 n n C1 H10 IKD sing 189 n n C1 H11 IKD sing 190 n n C3 H12 IKD sing 191 n n C3 H13 IKD sing 192 n n C3 H14 IKD sing 193 n n C9 H15 IKD sing 194 n n C14 H16 IKD sing 195 n n C16 H17 IKD sing 196 n n C16 H18 IKD sing 197 n n C18 H19 IKD sing 198 n n C19 H20 IKD sing 199 n n N6 H21 IKD sing 200 n n # _atom_sites.entry_id 8Q1Z _atom_sites.fract_transf_matrix[1][1] 0.017627 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014078 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006328 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IKD A 1 401 421 IKD LIG . C 3 HOH A 1 501 56 HOH HOH . C 3 HOH A 2 502 91 HOH HOH . C 3 HOH A 3 503 86 HOH HOH . C 3 HOH A 4 504 83 HOH HOH . C 3 HOH A 5 505 63 HOH HOH . C 3 HOH A 6 506 84 HOH HOH . C 3 HOH A 7 507 14 HOH HOH . C 3 HOH A 8 508 111 HOH HOH . C 3 HOH A 9 509 34 HOH HOH . C 3 HOH A 10 510 27 HOH HOH . C 3 HOH A 11 511 71 HOH HOH . C 3 HOH A 12 512 9 HOH HOH . C 3 HOH A 13 513 20 HOH HOH . C 3 HOH A 14 514 72 HOH HOH . C 3 HOH A 15 515 68 HOH HOH . C 3 HOH A 16 516 94 HOH HOH . C 3 HOH A 17 517 15 HOH HOH . C 3 HOH A 18 518 50 HOH HOH . C 3 HOH A 19 519 60 HOH HOH . C 3 HOH A 20 520 53 HOH HOH . C 3 HOH A 21 521 43 HOH HOH . C 3 HOH A 22 522 75 HOH HOH . C 3 HOH A 23 523 37 HOH HOH . C 3 HOH A 24 524 42 HOH HOH . C 3 HOH A 25 525 108 HOH HOH . C 3 HOH A 26 526 76 HOH HOH . C 3 HOH A 27 527 93 HOH HOH . C 3 HOH A 28 528 48 HOH HOH . C 3 HOH A 29 529 39 HOH HOH . C 3 HOH A 30 530 110 HOH HOH . C 3 HOH A 31 531 13 HOH HOH . C 3 HOH A 32 532 103 HOH HOH . C 3 HOH A 33 533 31 HOH HOH . C 3 HOH A 34 534 81 HOH HOH . C 3 HOH A 35 535 87 HOH HOH . C 3 HOH A 36 536 101 HOH HOH . C 3 HOH A 37 537 49 HOH HOH . C 3 HOH A 38 538 38 HOH HOH . C 3 HOH A 39 539 121 HOH HOH . C 3 HOH A 40 540 18 HOH HOH . C 3 HOH A 41 541 52 HOH HOH . C 3 HOH A 42 542 16 HOH HOH . C 3 HOH A 43 543 7 HOH HOH . C 3 HOH A 44 544 85 HOH HOH . C 3 HOH A 45 545 89 HOH HOH . C 3 HOH A 46 546 55 HOH HOH . C 3 HOH A 47 547 64 HOH HOH . C 3 HOH A 48 548 62 HOH HOH . C 3 HOH A 49 549 105 HOH HOH . C 3 HOH A 50 550 6 HOH HOH . C 3 HOH A 51 551 66 HOH HOH . C 3 HOH A 52 552 46 HOH HOH . C 3 HOH A 53 553 32 HOH HOH . C 3 HOH A 54 554 90 HOH HOH . C 3 HOH A 55 555 24 HOH HOH . C 3 HOH A 56 556 45 HOH HOH . C 3 HOH A 57 557 10 HOH HOH . C 3 HOH A 58 558 5 HOH HOH . C 3 HOH A 59 559 99 HOH HOH . C 3 HOH A 60 560 96 HOH HOH . C 3 HOH A 61 561 3 HOH HOH . C 3 HOH A 62 562 78 HOH HOH . C 3 HOH A 63 563 109 HOH HOH . C 3 HOH A 64 564 35 HOH HOH . C 3 HOH A 65 565 79 HOH HOH . C 3 HOH A 66 566 2 HOH HOH . C 3 HOH A 67 567 114 HOH HOH . C 3 HOH A 68 568 8 HOH HOH . C 3 HOH A 69 569 104 HOH HOH . C 3 HOH A 70 570 88 HOH HOH . C 3 HOH A 71 571 26 HOH HOH . C 3 HOH A 72 572 92 HOH HOH . C 3 HOH A 73 573 65 HOH HOH . C 3 HOH A 74 574 57 HOH HOH . C 3 HOH A 75 575 115 HOH HOH . C 3 HOH A 76 576 4 HOH HOH . C 3 HOH A 77 577 113 HOH HOH . C 3 HOH A 78 578 97 HOH HOH . C 3 HOH A 79 579 74 HOH HOH . C 3 HOH A 80 580 51 HOH HOH . C 3 HOH A 81 581 22 HOH HOH . C 3 HOH A 82 582 28 HOH HOH . C 3 HOH A 83 583 69 HOH HOH . C 3 HOH A 84 584 112 HOH HOH . C 3 HOH A 85 585 11 HOH HOH . C 3 HOH A 86 586 102 HOH HOH . C 3 HOH A 87 587 17 HOH HOH . C 3 HOH A 88 588 21 HOH HOH . C 3 HOH A 89 589 41 HOH HOH . C 3 HOH A 90 590 40 HOH HOH . C 3 HOH A 91 591 116 HOH HOH . C 3 HOH A 92 592 119 HOH HOH . C 3 HOH A 93 593 106 HOH HOH . C 3 HOH A 94 594 23 HOH HOH . C 3 HOH A 95 595 19 HOH HOH . C 3 HOH A 96 596 59 HOH HOH . C 3 HOH A 97 597 25 HOH HOH . C 3 HOH A 98 598 36 HOH HOH . C 3 HOH A 99 599 47 HOH HOH . C 3 HOH A 100 600 67 HOH HOH . C 3 HOH A 101 601 98 HOH HOH . C 3 HOH A 102 602 95 HOH HOH . C 3 HOH A 103 603 61 HOH HOH . C 3 HOH A 104 604 1 HOH HOH . C 3 HOH A 105 605 100 HOH HOH . C 3 HOH A 106 606 12 HOH HOH . C 3 HOH A 107 607 58 HOH HOH . C 3 HOH A 108 608 30 HOH HOH . C 3 HOH A 109 609 118 HOH HOH . C 3 HOH A 110 610 44 HOH HOH . C 3 HOH A 111 611 117 HOH HOH . C 3 HOH A 112 612 29 HOH HOH . C 3 HOH A 113 613 82 HOH HOH . C 3 HOH A 114 614 73 HOH HOH . C 3 HOH A 115 615 54 HOH HOH . C 3 HOH A 116 616 80 HOH HOH . C 3 HOH A 117 617 107 HOH HOH . C 3 HOH A 118 618 120 HOH HOH . C 3 HOH A 119 619 70 HOH HOH . C 3 HOH A 120 620 77 HOH HOH . C 3 HOH A 121 621 122 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 IKD . . . B 2 10.035 16.455 7.566 1 40.96 ? N1 IKD 401 A 1 HETATM 2 N N3 IKD . . . B 2 12.479 19.521 10.006 1 60.74 ? N3 IKD 401 A 1 HETATM 3 C C4 IKD . . . B 2 4.809 19.413 8.451 1 63.85 ? C4 IKD 401 A 1 HETATM 4 C C5 IKD . . . B 2 7.176 18.606 8.233 1 58.69 ? C5 IKD 401 A 1 HETATM 5 C C6 IKD . . . B 2 8.5 18.241 8.553 1 54.25 ? C6 IKD 401 A 1 HETATM 6 C C7 IKD . . . B 2 8.848 17.201 7.691 1 46.73 ? C7 IKD 401 A 1 HETATM 7 C C8 IKD . . . B 2 11.253 16.75 8.182 1 42.13 ? C8 IKD 401 A 1 HETATM 8 C C10 IKD . . . B 2 13.452 16.3 8.891 1 46.92 ? C10 IKD 401 A 1 HETATM 9 C C13 IKD . . . B 2 11.338 20.082 12.132 1 72.62 ? C13 IKD 401 A 1 HETATM 10 C C15 IKD . . . B 2 9.204 21.232 12.065 1 70.15 ? C15 IKD 401 A 1 HETATM 11 C C17 IKD . . . B 2 8.228 22.267 14.117 1 70.41 ? C17 IKD 401 A 1 HETATM 12 C C1 IKD . . . B 2 6.674 21.044 8.238 1 66.5 ? C1 IKD 401 A 1 HETATM 13 C C2 IKD . . . B 2 6.274 19.684 8.816 1 63.95 ? C2 IKD 401 A 1 HETATM 14 C C3 IKD . . . B 2 6.4 19.732 10.344 1 64.66 ? C3 IKD 401 A 1 HETATM 15 C C9 IKD . . . B 2 12.328 15.868 8.246 1 38.94 ? C9 IKD 401 A 1 HETATM 16 N N2 IKD . . . B 2 13.538 17.497 9.487 1 55.06 ? N2 IKD 401 A 1 HETATM 17 C C11 IKD . . . B 2 12.456 18.3 9.392 1 56.28 ? C11 IKD 401 A 1 HETATM 18 C C12 IKD . . . B 2 11.428 20.128 10.74 1 68.98 ? C12 IKD 401 A 1 HETATM 19 C C14 IKD . . . B 2 10.244 20.639 12.776 1 75.04 ? C14 IKD 401 A 1 HETATM 20 C C16 IKD . . . B 2 7.989 21.83 12.747 1 72.97 ? C16 IKD 401 A 1 HETATM 21 N N4 IKD . . . B 2 8.439 22.705 15.152 1 55 ? N4 IKD 401 A 1 HETATM 22 C C18 IKD . . . B 2 9.297 21.257 10.687 1 64.06 ? C18 IKD 401 A 1 HETATM 23 C C19 IKD . . . B 2 10.383 20.715 10.026 1 69.88 ? C19 IKD 401 A 1 HETATM 24 N N5 IKD . . . B 2 11.314 17.953 8.761 1 44.4 ? N5 IKD 401 A 1 HETATM 25 N N6 IKD . . . B 2 7.78 16.997 6.907 1 51.56 ? N6 IKD 401 A 1 HETATM 26 N N7 IKD . . . B 2 6.761 17.852 7.21 1 58.24 ? N7 IKD 401 A 1 # _model_server_stats.io_time_ms 64 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 26 #