data_8Q3J # _model_server_result.job_id 2cSUdwHNbhj75bISACwcEQ _model_server_result.datetime_utc '2025-02-27 03:30:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8q3j # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":301}' # _entry.id 8Q3J # _exptl.entry_id 8Q3J _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.727 _cell.angle_gamma 90 _cell.entry_id 8Q3J _cell.length_a 73.8 _cell.length_b 66.94 _cell.length_c 129.05 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8Q3J _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA trimeric 3 author_and_software_defined_assembly 1 PISA trimeric 3 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,G,H,K,L,M 1 1 D,E,F,I,J,N,O,P 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 H N N ? 4 I N N ? 4 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 2 A CYS 2 1_555 A SG CYS 43 A CYS 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? disulf ? disulf2 A SG CYS 70 A CYS 70 1_555 A SG CYS 117 A CYS 117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? disulf ? disulf3 B SG CYS 26 B CYS 23 1_555 B SG CYS 91 B CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? disulf ? disulf4 B SG CYS 136 B CYS 133 1_555 B SG CYS 196 B CYS 193 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf5 C SG CYS 29 C CYS 22 1_555 C SG CYS 103 C CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? disulf ? disulf6 C SG CYS 160 C CYS 153 1_555 C SG CYS 216 C CYS 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? disulf ? disulf7 D SG CYS 2 D CYS 2 1_555 D SG CYS 43 D CYS 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? disulf ? disulf8 D SG CYS 70 D CYS 70 1_555 D SG CYS 117 D CYS 117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? disulf ? disulf9 E SG CYS 26 E CYS 23 1_555 E SG CYS 91 E CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? disulf ? disulf10 E SG CYS 136 E CYS 133 1_555 E SG CYS 196 E CYS 193 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? disulf ? disulf11 F SG CYS 29 F CYS 22 1_555 F SG CYS 103 F CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? disulf ? disulf12 F SG CYS 160 F CYS 153 1_555 F SG CYS 216 F CYS 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 260 n n P O2 PO4 sing 261 n n P O3 PO4 sing 262 n n P O4 PO4 sing 263 n n # _atom_sites.entry_id 8Q3J _atom_sites.fract_transf_matrix[1][1] 0.01355 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003562 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014939 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008012 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 PO4 A 1 201 2 PO4 PO4 . H 4 PO4 C 1 301 1 PO4 PO4 . I 4 PO4 E 1 301 3 PO4 PO4 . J 4 PO4 F 1 301 4 PO4 PO4 . K 5 HOH A 1 301 18 HOH HOH . K 5 HOH A 2 302 16 HOH HOH . K 5 HOH A 3 303 15 HOH HOH . K 5 HOH A 4 304 71 HOH HOH . K 5 HOH A 5 305 84 HOH HOH . K 5 HOH A 6 306 68 HOH HOH . K 5 HOH A 7 307 13 HOH HOH . K 5 HOH A 8 308 52 HOH HOH . K 5 HOH A 9 309 70 HOH HOH . K 5 HOH A 10 310 53 HOH HOH . K 5 HOH A 11 311 17 HOH HOH . K 5 HOH A 12 312 69 HOH HOH . K 5 HOH A 13 313 40 HOH HOH . K 5 HOH A 14 314 14 HOH HOH . K 5 HOH A 15 315 58 HOH HOH . K 5 HOH A 16 316 65 HOH HOH . K 5 HOH A 17 317 25 HOH HOH . K 5 HOH A 18 318 24 HOH HOH . K 5 HOH A 19 319 2 HOH HOH . K 5 HOH A 20 320 63 HOH HOH . K 5 HOH A 21 321 1 HOH HOH . L 5 HOH B 1 301 76 HOH HOH . L 5 HOH B 2 302 74 HOH HOH . L 5 HOH B 3 303 27 HOH HOH . L 5 HOH B 4 304 67 HOH HOH . L 5 HOH B 5 305 73 HOH HOH . L 5 HOH B 6 306 79 HOH HOH . L 5 HOH B 7 307 7 HOH HOH . L 5 HOH B 8 308 46 HOH HOH . L 5 HOH B 9 309 45 HOH HOH . L 5 HOH B 10 310 72 HOH HOH . L 5 HOH B 11 311 6 HOH HOH . L 5 HOH B 12 312 83 HOH HOH . L 5 HOH B 13 313 75 HOH HOH . L 5 HOH B 14 314 47 HOH HOH . L 5 HOH B 15 315 78 HOH HOH . L 5 HOH B 16 316 8 HOH HOH . L 5 HOH B 17 317 26 HOH HOH . L 5 HOH B 18 318 77 HOH HOH . L 5 HOH B 19 319 80 HOH HOH . M 5 HOH C 1 401 51 HOH HOH . M 5 HOH C 2 402 81 HOH HOH . M 5 HOH C 3 403 88 HOH HOH . M 5 HOH C 4 404 57 HOH HOH . M 5 HOH C 5 405 42 HOH HOH . M 5 HOH C 6 406 86 HOH HOH . M 5 HOH C 7 407 41 HOH HOH . M 5 HOH C 8 408 29 HOH HOH . M 5 HOH C 9 409 89 HOH HOH . M 5 HOH C 10 410 28 HOH HOH . M 5 HOH C 11 411 82 HOH HOH . M 5 HOH C 12 412 56 HOH HOH . M 5 HOH C 13 413 12 HOH HOH . M 5 HOH C 14 414 66 HOH HOH . M 5 HOH C 15 415 3 HOH HOH . M 5 HOH C 16 416 85 HOH HOH . M 5 HOH C 17 417 11 HOH HOH . M 5 HOH C 18 418 61 HOH HOH . M 5 HOH C 19 419 48 HOH HOH . M 5 HOH C 20 420 50 HOH HOH . M 5 HOH C 21 421 87 HOH HOH . N 5 HOH D 1 201 95 HOH HOH . N 5 HOH D 2 202 94 HOH HOH . N 5 HOH D 3 203 4 HOH HOH . N 5 HOH D 4 204 31 HOH HOH . N 5 HOH D 5 205 91 HOH HOH . N 5 HOH D 6 206 19 HOH HOH . N 5 HOH D 7 207 92 HOH HOH . N 5 HOH D 8 208 49 HOH HOH . N 5 HOH D 9 209 33 HOH HOH . N 5 HOH D 10 210 20 HOH HOH . N 5 HOH D 11 211 30 HOH HOH . N 5 HOH D 12 212 90 HOH HOH . N 5 HOH D 13 213 60 HOH HOH . N 5 HOH D 14 214 93 HOH HOH . N 5 HOH D 15 215 34 HOH HOH . N 5 HOH D 16 216 32 HOH HOH . O 5 HOH E 1 401 35 HOH HOH . O 5 HOH E 2 402 97 HOH HOH . O 5 HOH E 3 403 64 HOH HOH . O 5 HOH E 4 404 44 HOH HOH . O 5 HOH E 5 405 59 HOH HOH . O 5 HOH E 6 406 21 HOH HOH . O 5 HOH E 7 407 99 HOH HOH . O 5 HOH E 8 408 9 HOH HOH . O 5 HOH E 9 409 96 HOH HOH . O 5 HOH E 10 410 54 HOH HOH . O 5 HOH E 11 411 36 HOH HOH . O 5 HOH E 12 412 23 HOH HOH . O 5 HOH E 13 413 62 HOH HOH . O 5 HOH E 14 414 55 HOH HOH . O 5 HOH E 15 415 22 HOH HOH . O 5 HOH E 16 416 101 HOH HOH . O 5 HOH E 17 417 100 HOH HOH . O 5 HOH E 18 418 98 HOH HOH . P 5 HOH F 1 401 105 HOH HOH . P 5 HOH F 2 402 43 HOH HOH . P 5 HOH F 3 403 107 HOH HOH . P 5 HOH F 4 404 108 HOH HOH . P 5 HOH F 5 405 104 HOH HOH . P 5 HOH F 6 406 39 HOH HOH . P 5 HOH F 7 407 5 HOH HOH . P 5 HOH F 8 408 106 HOH HOH . P 5 HOH F 9 409 37 HOH HOH . P 5 HOH F 10 410 10 HOH HOH . P 5 HOH F 11 411 38 HOH HOH . P 5 HOH F 12 412 103 HOH HOH . P 5 HOH F 13 413 109 HOH HOH . P 5 HOH F 14 414 102 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . H 4 -22.278 -3.298 5.193 1 89.62 ? P PO4 301 C 1 HETATM 2 O O1 PO4 . . . H 4 -22.208 -1.977 4.449 1 62.79 ? O1 PO4 301 C 1 HETATM 3 O O2 PO4 . . . H 4 -22.532 -3.036 6.668 1 82.35 ? O2 PO4 301 C 1 HETATM 4 O O3 PO4 . . . H 4 -23.412 -4.135 4.649 1 82.54 ? O3 PO4 301 C 1 HETATM 5 O O4 PO4 . . . H 4 -20.987 -4.077 4.984 1 78.02 ? O4 PO4 301 C 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 31 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 5 #