data_8Q3P # _model_server_result.job_id b979BZzNqDhA05XH7oVVaw _model_server_result.datetime_utc '2024-10-11 02:16:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8q3p # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"ZA","auth_seq_id":1001}' # _entry.id 8Q3P # _exptl.entry_id 8Q3P _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 18 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8Q3P _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8Q3P _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details 18-meric _pdbx_struct_assembly.oligomeric_count 18 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 T N N ? 3 V N N ? 3 X N N ? 3 Z N N ? 3 BA N N ? 3 DA N N ? 3 FA N N ? 3 HA N N ? 3 JA N N ? 3 LA N N ? 3 NA N N ? 3 PA N N ? 3 RA N N ? 3 TA N N ? 3 VA N N ? 3 XA N N ? 3 ZA N N ? 3 BB N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG1 THR 188 a THR 185 1_555 T MG MG . a MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? metalc ? metalc2 S O1B ADP . a ADP 1000 1_555 T MG MG . a MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.378 ? metalc ? metalc3 B OG1 THR 188 r THR 185 1_555 V MG MG . r MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? metalc ? metalc4 U O1B ADP . r ADP 1000 1_555 V MG MG . r MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.379 ? metalc ? metalc5 C OG1 THR 188 q THR 185 1_555 X MG MG . q MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? metalc ? metalc6 W O1B ADP . q ADP 1000 1_555 X MG MG . q MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.379 ? metalc ? metalc7 D OG1 THR 188 p THR 185 1_555 Z MG MG . p MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? metalc ? metalc8 Y O1B ADP . p ADP 1000 1_555 Z MG MG . p MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.378 ? metalc ? metalc9 E OG1 THR 188 o THR 185 1_555 BA MG MG . o MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? metalc ? metalc10 AA O1B ADP . o ADP 1000 1_555 BA MG MG . o MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.378 ? metalc ? metalc11 F OG1 THR 188 n THR 185 1_555 DA MG MG . n MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? metalc ? metalc12 CA O1B ADP . n ADP 1000 1_555 DA MG MG . n MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.378 ? metalc ? metalc13 G OG1 THR 188 m THR 185 1_555 FA MG MG . m MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? metalc ? metalc14 EA O1B ADP . m ADP 1000 1_555 FA MG MG . m MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.378 ? metalc ? metalc15 H OG1 THR 188 l THR 185 1_555 HA MG MG . l MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? metalc ? metalc16 GA O1B ADP . l ADP 1000 1_555 HA MG MG . l MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.379 ? metalc ? metalc17 I OG1 THR 188 k THR 185 1_555 JA MG MG . k MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? metalc ? metalc18 IA O1B ADP . k ADP 1000 1_555 JA MG MG . k MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.379 ? metalc ? metalc19 J OG1 THR 188 j THR 185 1_555 LA MG MG . j MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? metalc ? metalc20 KA O1B ADP . j ADP 1000 1_555 LA MG MG . j MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.379 ? metalc ? metalc21 K OG1 THR 188 b THR 185 1_555 NA MG MG . b MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? metalc ? metalc22 MA O1B ADP . b ADP 1000 1_555 NA MG MG . b MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.378 ? metalc ? metalc23 L OG1 THR 188 c THR 185 1_555 PA MG MG . c MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? metalc ? metalc24 OA O1B ADP . c ADP 1000 1_555 PA MG MG . c MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.378 ? metalc ? metalc25 M OG1 THR 188 d THR 185 1_555 RA MG MG . d MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? metalc ? metalc26 QA O1B ADP . d ADP 1000 1_555 RA MG MG . d MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.379 ? metalc ? metalc27 N OG1 THR 188 e THR 185 1_555 TA MG MG . e MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? metalc ? metalc28 SA O1B ADP . e ADP 1000 1_555 TA MG MG . e MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.378 ? metalc ? metalc29 O OG1 THR 188 f THR 185 1_555 VA MG MG . f MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? metalc ? metalc30 UA O1B ADP . f ADP 1000 1_555 VA MG MG . f MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.378 ? metalc ? metalc31 P OG1 THR 188 g THR 185 1_555 XA MG MG . g MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? metalc ? metalc32 WA O1B ADP . g ADP 1000 1_555 XA MG MG . g MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.379 ? metalc ? metalc33 Q OG1 THR 188 h THR 185 1_555 ZA MG MG . h MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? metalc ? metalc34 YA O1B ADP . h ADP 1000 1_555 ZA MG MG . h MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.378 ? metalc ? metalc35 R OG1 THR 188 i THR 185 1_555 BB MG MG . i MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? metalc ? metalc36 AB O1B ADP . i ADP 1000 1_555 BB MG MG . i MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.379 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8Q3P _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code S 2 ADP a 1 1000 1000 ADP ADP . T 3 MG a 1 1001 1001 MG MG . U 2 ADP r 1 1000 1000 ADP ADP . V 3 MG r 1 1001 1001 MG MG . W 2 ADP q 1 1000 1000 ADP ADP . X 3 MG q 1 1001 1001 MG MG . Y 2 ADP p 1 1000 1000 ADP ADP . Z 3 MG p 1 1001 1001 MG MG . AA 2 ADP o 1 1000 1000 ADP ADP . BA 3 MG o 1 1001 1001 MG MG . CA 2 ADP n 1 1000 1000 ADP ADP . DA 3 MG n 1 1001 1001 MG MG . EA 2 ADP m 1 1000 1000 ADP ADP . FA 3 MG m 1 1001 1001 MG MG . GA 2 ADP l 1 1000 1000 ADP ADP . HA 3 MG l 1 1001 1001 MG MG . IA 2 ADP k 1 1000 1000 ADP ADP . JA 3 MG k 1 1001 1001 MG MG . KA 2 ADP j 1 1000 1000 ADP ADP . LA 3 MG j 1 1001 1001 MG MG . MA 2 ADP b 1 1000 1000 ADP ADP . NA 3 MG b 1 1001 1001 MG MG . OA 2 ADP c 1 1000 1000 ADP ADP . PA 3 MG c 1 1001 1001 MG MG . QA 2 ADP d 1 1000 1000 ADP ADP . RA 3 MG d 1 1001 1001 MG MG . SA 2 ADP e 1 1000 1000 ADP ADP . TA 3 MG e 1 1001 1001 MG MG . UA 2 ADP f 1 1000 1000 ADP ADP . VA 3 MG f 1 1001 1001 MG MG . WA 2 ADP g 1 1000 1000 ADP ADP . XA 3 MG g 1 1001 1001 MG MG . YA 2 ADP h 1 1000 1000 ADP ADP . ZA 3 MG h 1 1001 1001 MG MG . AB 2 ADP i 1 1000 1000 ADP ADP . BB 3 MG i 1 1001 1001 MG MG . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id ZA _atom_site.label_entity_id 3 _atom_site.Cartn_x 175.897 _atom_site.Cartn_y 188.267 _atom_site.Cartn_z 167.104 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 134.35 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 1001 _atom_site.auth_asym_id h _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 184 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 85 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #